BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4638.p (269 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777087.1| hypothetical protein Hsero_3701 [Herbaspiril... 287 1e-75 ref|YP_004752541.1| 3-oxoacyl-(acyl-carrier-protein) synthase [C... 207 1e-51 ref|ZP_08275015.1| 3-oxoacyl-(acyl-carrier-protein) synthase [Ox... 172 3e-41 ref|YP_002030307.1| hypothetical protein Smal_3925 [Stenotrophom... 172 4e-41 ref|YP_001974204.1| hypothetical protein Smlt4573 [Stenotrophomo... 167 1e-39 >ref|YP_003777087.1| hypothetical protein Hsero_3701 [Herbaspirillum seropedicae SmR1] gb|ADJ65179.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 224 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 183/228 (80%), Positives = 192/228 (84%), Gaps = 9/228 (3%) Query: 47 MPPMLRRRTSPVGKLALEAAYGALSAAPPAIASSPADDASKDAQD--IPVVFASRHGECA 104 MPPMLRRRTSPVGKLALE AYGAL+AA AS P+ DA A D IPVVFASRHGECA Sbjct: 1 MPPMLRRRTSPVGKLALETAYGALTAA----ASHPSHDARPAASDLDIPVVFASRHGECA 56 Query: 105 RSVELQMALAAAAPMSPTAFSLSVHNANAGLFSIARGSQANTVAIAAGQSTVEHAVIEAC 164 RSVELQMALA AAPMSPTAFSLSVHNANAGLFSIARGS ANTVAIAAGQSTVEHAVIEAC Sbjct: 57 RSVELQMALAEAAPMSPTAFSLSVHNANAGLFSIARGSAANTVAIAAGQSTVEHAVIEAC 116 Query: 165 GLLADGARQVLLVVADAPLPTLFSDFADEHEEPCGWSWLMQAADEHGALPTVSLQWQQIQ 224 GLLADGA QVL+VVADAPLPT+F+DFADE EEPCGWSWL+QAADE ALPT+SLQWQQ Sbjct: 117 GLLADGAPQVLVVVADAPLPTMFADFADEQEEPCGWSWLIQAADEQDALPTLSLQWQQAP 176 Query: 225 PGHGTLPSEN---ATAGAAAVLRFFLDASTSTLHRQADGRRWHWMRHA 269 G + + A AGAAAVLRFFLDA STLHR ADGRRW WMRHA Sbjct: 177 AGGDVDVASHANNAAAGAAAVLRFFLDADASTLHRHADGRRWQWMRHA 224 >ref|YP_004752541.1| 3-oxoacyl-(acyl-carrier-protein) synthase [Collimonas fungivorans Ter331] gb|AEK61718.1| 3-oxoacyl-(acyl-carrier-protein) synthase [Collimonas fungivorans Ter331] Length = 263 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 137/273 (50%), Positives = 162/273 (59%), Gaps = 22/273 (8%) Query: 1 MYSGDVSFSIASHAQWVPGIESHADWQRWISDDRQAAGSGEPAVKSMPPMLRRRTSPVGK 60 M G V FSI S A W PG+++ A W W + GSG+ AV +MP MLRRR +GK Sbjct: 7 MKLGGVRFSIVSDAAWAPGLDTAAAWLGWAAQPYAIEGSGDAAVAAMPAMLRRRAGAMGK 66 Query: 61 LALEAAYGALSAAPPAIASSPADDASKDAQDIPVVFASRHGECARSVELQMALAAAAPMS 120 +ALEAAY L +P VF SRHGECARS+EL LA P+S Sbjct: 67 MALEAAYRCLDGK----------------TGVPTVFCSRHGECARSIELLADLAQDQPLS 110 Query: 121 PTAFSLSVHNANAGLFSIARGSQANTVAIAAGQSTVEHAVIEACGLLADGARQVLLVVAD 180 PT+FSLSVHNA AGLFSIAR QA+ A+AAG S VEHAVIEACGLLADGA +VLLVV D Sbjct: 111 PTSFSLSVHNAAAGLFSIARKDQASHTALAAGHSGVEHAVIEACGLLADGAPEVLLVVYD 170 Query: 181 APLPTLFSDFADEHEEPCGWSWLMQAADEHGALPTVSLQWQ---QIQPGHGTLPSENA-T 236 LP LF +F D E+P W+WLM +A+ G+ ++L W Q + S N Sbjct: 171 CQLPELFQEFQDCLEQPFAWAWLM-SAESVGSGHRMALSWDGAGQDETNAMAQESNNGRQ 229 Query: 237 AGAAAVLRFFLDASTSTLHRQADGRRWHWMRHA 269 G VL F+L S L R ADGRRW W RHA Sbjct: 230 PGGLDVLAFYL-RSDRELVRNADGRRWCWERHA 261 >ref|ZP_08275015.1| 3-oxoacyl-(acyl-carrier-protein) synthase [Oxalobacteraceae bacterium IMCC9480] gb|EGF31515.1| 3-oxoacyl-(acyl-carrier-protein) synthase [Oxalobacteraceae bacterium IMCC9480] Length = 248 Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 121/268 (45%), Positives = 146/268 (54%), Gaps = 22/268 (8%) Query: 2 YSGDVSFSIASHAQWVPGIESHADWQRWISDDRQAAGSGEPAVKSMPPMLRRRTSPVGKL 61 ++ VSFSIA + W PGIE+ W W +PAV +M PMLRRR +GK+ Sbjct: 3 HAQSVSFSIAGQSAWAPGIETPQAWHTWAQSPFPILDGADPAVPAMAPMLRRRAGFLGKM 62 Query: 62 ALEAAYGALSAAPPAIASSPADDASKDAQDIPVVFASRHGECARSVELQMALAAAAPMSP 121 AL+ AY L +D IP VF SRHGE ARSV L LA A +SP Sbjct: 63 ALQVAYQCL----------------EDRSTIPTVFCSRHGEVARSVALLTDLAQDAGLSP 106 Query: 122 TAFSLSVHNANAGLFSIARGSQANTVAIAAGQSTVEHAVIEACGLLADGARQVLLVVADA 181 TAF L+VHNA+AGLFSIAR QA+ A+AAG ST+EH VI+AC LLADGA VLLV D Sbjct: 107 TAFGLAVHNASAGLFSIARADQASHQAVAAGASTIEHGVIDACTLLADGAPMVLLVTYDD 166 Query: 182 PLPTLFSDFADEHEEPCGWSWLMQAADEHGALPTVSLQWQQIQPGHGTLPSENATAGAAA 241 LP LF+ F D HE+P W+WLM A A V L W G + + A G Sbjct: 167 RLPPLFAGFDDCHEQPHAWAWLMVPA----AADPVHLSWSAAVLGDIDI-APAALPGGLE 221 Query: 242 VLRFFLDASTSTLHRQADGRRWHWMRHA 269 +LRF L + + L R W W A Sbjct: 222 ILRFAL-RNDAVLERTVGPHCWRWTHDA 248 >ref|YP_002030307.1| hypothetical protein Smal_3925 [Stenotrophomonas maltophilia R551-3] gb|ACF53624.1| conserved hypothetical protein [Stenotrophomonas maltophilia R551-3] Length = 247 Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 112/262 (42%), Positives = 148/262 (56%), Gaps = 18/262 (6%) Query: 6 VSFSIASHAQWVPGIESHADWQRWISDDRQAAGSGEPAVKSMPPMLRRRTSPVGKLALEA 65 + FSI A W PG+ + W W G+ PA+ +P M RRR +G++A++A Sbjct: 2 IEFSIVDWAAWAPGLSERSQWLGWADAPYLPHGADTPALAEVPAMQRRRIERLGRMAIQA 61 Query: 66 AYGALSAAPPAIASSPADDASKDAQDIPVVFASRHGECARSVELQMALAAAAPMSPTAFS 125 A +D D+P+VFASRHG+ ARS++L ALAA P+SPT F Sbjct: 62 A-------------CWCEDGQGADSDVPLVFASRHGDVARSMDLLGALAADEPLSPTGFG 108 Query: 126 LSVHNANAGLFSIARGSQANTVAIAAGQSTVEHAVIEACGLLADGARQVLLVVADAPLPT 185 LSVHNA A L+SIARG + N +A+AAGQ+TVE A +EA GLLADGAR+V +VV ++PLP Sbjct: 109 LSVHNAIAALYSIARGHRGNYLALAAGQATVETACLEAVGLLADGAREVRVVVYESPLPE 168 Query: 186 LFSDFADEHEEPCGWSWLMQAADEHGALPTVSLQWQQIQPGHGTLPSENATAGAAAVLRF 245 +++ FADE + W W + A E PT+SLQWQQ T P A L Sbjct: 169 IYATFADEPDPFFAWCWRLTAPAE--GRPTLSLQWQQADAQASTAP---GLLPHALDLHR 223 Query: 246 FLDASTSTLHRQADGRRWHWMR 267 FL + L A G+RW W R Sbjct: 224 FLLSGAPALEHVAHGQRWRWSR 245 >ref|YP_001974204.1| hypothetical protein Smlt4573 [Stenotrophomonas maltophilia K279a] emb|CAQ47928.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a] Length = 247 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 107/262 (40%), Positives = 144/262 (54%), Gaps = 18/262 (6%) Query: 6 VSFSIASHAQWVPGIESHADWQRWISDDRQAAGSGEPAVKSMPPMLRRRTSPVGKLALEA 65 + FSI A W PG+ + W W G PA+ +P M RRR +G++A++ Sbjct: 2 IEFSIVDWAAWAPGLSERSQWLGWAEAPYLPHGGDTPALAEVPAMQRRRIERLGRMAIQT 61 Query: 66 AYGALSAAPPAIASSPADDASKDAQDIPVVFASRHGECARSVELQMALAAAAPMSPTAFS 125 A +D D+P+VFASRHG+ ARS++L AL P+SPT F Sbjct: 62 A-------------CWCEDGQGADSDVPLVFASRHGDVARSMDLLGALVGDQPLSPTGFG 108 Query: 126 LSVHNANAGLFSIARGSQANTVAIAAGQSTVEHAVIEACGLLADGARQVLLVVADAPLPT 185 LSVHNA A L+SIARG + N +A+AAGQ+TVE A +EA GLLADGAR+V +VV ++PLP Sbjct: 109 LSVHNAIAALYSIARGHRGNYLALAAGQATVEAACLEAVGLLADGAREVRVVVYESPLPE 168 Query: 186 LFSDFADEHEEPCGWSWLMQAADEHGALPTVSLQWQQIQPGHGTLPSENATAGAAAVLRF 245 +++ FADE + W W + A E PT++LQW QP G + A L Sbjct: 169 VYATFADEPDPFFAWCWRLTAPAED--RPTLALQW---QPADGQASTVPGLLPHALDLHR 223 Query: 246 FLDASTSTLHRQADGRRWHWMR 267 FL + L A G+RW W R Sbjct: 224 FLLSGAPALEHVAHGQRWRWGR 245