BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4635.p (238 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777083.1| 3-demethylubiquinone-9 3-methyl transferase ... 465 e-129 ref|YP_001354368.1| 3-demethylubiquinone-9 3-methyltransferase [... 404 e-111 ref|YP_004754406.1| 3-demethylubiquinone-9 3-methyltransferase [... 404 e-111 ref|ZP_08272602.1| 3-demethylubiquinone-9 3-methyltransferase [O... 384 e-105 ref|YP_001100827.1| bifunctional 3-demethylubiquinone-9 3-methyl... 383 e-104 >ref|YP_003777083.1| 3-demethylubiquinone-9 3-methyl transferase [Herbaspirillum seropedicae SmR1] gb|ADJ65175.1| 3-demethylubiquinone-9 3-methyl transferase protein [Herbaspirillum seropedicae SmR1] Length = 241 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 228/241 (94%), Positives = 231/241 (95%), Gaps = 3/241 (1%) Query: 1 MNTT---NATMNADPQEIQKFSELAHRWWDPGSEFRPLHEINPLRLEWINARAPLAGKKV 57 MNTT A +NADPQEIQKFSELAHRWWDPGSEFRPLHEINPLRLEWINARAPLAGKKV Sbjct: 1 MNTTTAPQANVNADPQEIQKFSELAHRWWDPGSEFRPLHEINPLRLEWINARAPLAGKKV 60 Query: 58 IDIGCGGGILAESMAKKGADVTGIDLSDKALKVADLHSMESGVQVRYEKIAAEDMAAREA 117 IDIGCGGGILAESMA KG DVTGIDLSDKALKVADLHSMESGVQVRYEKIAAEDMAAREA Sbjct: 61 IDIGCGGGILAESMALKGGDVTGIDLSDKALKVADLHSMESGVQVRYEKIAAEDMAAREA 120 Query: 118 GQYDVVTCMEMLEHVPDPAAIVRAAANLAKPGGKLFFSTLNRNMKSYVMAIIGAEYVLRL 177 GQYDVVTCMEMLEHVPDPAAIVRAAA LAKPGGKLFFSTLNRNMKSY+MAIIGAEYVLRL Sbjct: 121 GQYDVVTCMEMLEHVPDPAAIVRAAATLAKPGGKLFFSTLNRNMKSYLMAIIGAEYVLRL 180 Query: 178 LPKGTHDYAKFITPAELAHYTREAGLQIDGFKGMGYNPLTKIYSLNDDTSVNYLVACTKL 237 LPKGTHDYAKFITPAELAHYTR+A LQIDGFKGMGYNPLTKIYSLNDDTSVNYLVACTKL Sbjct: 181 LPKGTHDYAKFITPAELAHYTRQADLQIDGFKGMGYNPLTKIYSLNDDTSVNYLVACTKL 240 Query: 238 G 238 Sbjct: 241 A 241 >ref|YP_001354368.1| 3-demethylubiquinone-9 3-methyltransferase [Janthinobacterium sp. Marseille] gb|ABR88913.1| 3-demethylubiquinone-9 3-methyltransferase [Janthinobacterium sp. Marseille] Length = 231 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 191/229 (83%), Positives = 210/229 (91%) Query: 8 MNADPQEIQKFSELAHRWWDPGSEFRPLHEINPLRLEWINARAPLAGKKVIDIGCGGGIL 67 MNADP E++KFS+LAH+WWDP SEFRPLHEINPLRL WIN RAPLAGK V+DIGCGGGIL Sbjct: 1 MNADPLELKKFSDLAHQWWDPTSEFRPLHEINPLRLGWINGRAPLAGKNVVDIGCGGGIL 60 Query: 68 AESMAKKGADVTGIDLSDKALKVADLHSMESGVQVRYEKIAAEDMAAREAGQYDVVTCME 127 AESMAK GA+VTGIDLS+KALKVADLHS+ESGVQVRYE IAAED+A REAG++DVVTCME Sbjct: 61 AESMAKSGANVTGIDLSEKALKVADLHSLESGVQVRYELIAAEDLAEREAGRFDVVTCME 120 Query: 128 MLEHVPDPAAIVRAAANLAKPGGKLFFSTLNRNMKSYVMAIIGAEYVLRLLPKGTHDYAK 187 MLEHVPDPAAIV A A LAKPGGK+FFST+NRN K+Y+ A+IGAEY+LRLLPKGTHDYAK Sbjct: 121 MLEHVPDPAAIVAACAKLAKPGGKVFFSTINRNPKAYLHAVIGAEYLLRLLPKGTHDYAK 180 Query: 188 FITPAELAHYTREAGLQIDGFKGMGYNPLTKIYSLNDDTSVNYLVACTK 236 FITPAEL+ Y REAGL ID KGMG+NPLTKIYSLN DTSVNYLVACTK Sbjct: 181 FITPAELSRYAREAGLDIDALKGMGFNPLTKIYSLNQDTSVNYLVACTK 229 >ref|YP_004754406.1| 3-demethylubiquinone-9 3-methyltransferase [Collimonas fungivorans Ter331] gb|AEK63583.1| 3-demethylubiquinone-9 3-methyltransferase [Collimonas fungivorans Ter331] Length = 235 Score = 404 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 185/229 (80%), Positives = 211/229 (92%) Query: 8 MNADPQEIQKFSELAHRWWDPGSEFRPLHEINPLRLEWINARAPLAGKKVIDIGCGGGIL 67 MNADP E++KFS+LAHRWWDP SEFRPLHEINPLRLEWIN+RA LAGK+V+DIGCGGGIL Sbjct: 5 MNADPSELKKFSDLAHRWWDPESEFRPLHEINPLRLEWINSRAALAGKQVLDIGCGGGIL 64 Query: 68 AESMAKKGADVTGIDLSDKALKVADLHSMESGVQVRYEKIAAEDMAAREAGQYDVVTCME 127 AESMA+KGA VTGIDLSDKALKVADLHS+ESGVQVRYEKIAAE+MA REAGQ+DVVTCME Sbjct: 65 AESMARKGAVVTGIDLSDKALKVADLHSLESGVQVRYEKIAAEEMAGREAGQFDVVTCME 124 Query: 128 MLEHVPDPAAIVRAAANLAKPGGKLFFSTLNRNMKSYVMAIIGAEYVLRLLPKGTHDYAK 187 MLEHVPDPA+IVRA A L KPGG++FFSTLNRN+K+Y+ A++ AEY+LR+LPKGTHDYAK Sbjct: 125 MLEHVPDPASIVRACATLVKPGGQVFFSTLNRNLKAYLQAVLAAEYLLRMLPKGTHDYAK 184 Query: 188 FITPAELAHYTREAGLQIDGFKGMGYNPLTKIYSLNDDTSVNYLVACTK 236 FITPAELA + R AGL +D +GM YNPLT+IYSLN DTSVNYL+ACT+ Sbjct: 185 FITPAELAQFVRNAGLTVDVMRGMSYNPLTQIYSLNQDTSVNYLMACTR 233 >ref|ZP_08272602.1| 3-demethylubiquinone-9 3-methyltransferase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33932.1| 3-demethylubiquinone-9 3-methyltransferase [Oxalobacteraceae bacterium IMCC9480] Length = 253 Score = 384 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 176/229 (76%), Positives = 200/229 (87%) Query: 8 MNADPQEIQKFSELAHRWWDPGSEFRPLHEINPLRLEWINARAPLAGKKVIDIGCGGGIL 67 MNADPQE++KFS+LAHRWWDP SEFRPLH+INPLRLEWINAR PLA K V+DIGCGGGIL Sbjct: 22 MNADPQELKKFSDLAHRWWDPTSEFRPLHQINPLRLEWINARVPLANKTVLDIGCGGGIL 81 Query: 68 AESMAKKGADVTGIDLSDKALKVADLHSMESGVQVRYEKIAAEDMAAREAGQYDVVTCME 127 A+SMA+KGA VTGIDLS+KALKVADLHS+E+G+ +RYE I+AE+MA RE +DVVTCME Sbjct: 82 AQSMARKGAKVTGIDLSEKALKVADLHSLEAGIDMRYEMISAENMAEREPASFDVVTCME 141 Query: 128 MLEHVPDPAAIVRAAANLAKPGGKLFFSTLNRNMKSYVMAIIGAEYVLRLLPKGTHDYAK 187 MLEHVPDP AIVRA A L KPGGK+FFSTLNRN KSY+ AI+GAEY+LRLLPKGTHDY+K Sbjct: 142 MLEHVPDPEAIVRACATLVKPGGKIFFSTLNRNPKSYLFAILGAEYILRLLPKGTHDYSK 201 Query: 188 FITPAELAHYTREAGLQIDGFKGMGYNPLTKIYSLNDDTSVNYLVACTK 236 FITPAEL+ Y R A L IDG KGM YNP K YSLN +T VNY+VACT+ Sbjct: 202 FITPAELSRYARVADLNIDGLKGMTYNPFLKSYSLNGNTDVNYMVACTR 250 >ref|YP_001100827.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase [Herminiimonas arsenicoxydans] emb|CAL62706.1| 3-demethylubiquinone-9 3-methyltransferase (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase) (DHHB methyltransferase) [Herminiimonas arsenicoxydans] Length = 231 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 185/229 (80%), Positives = 211/229 (92%) Query: 8 MNADPQEIQKFSELAHRWWDPGSEFRPLHEINPLRLEWINARAPLAGKKVIDIGCGGGIL 67 MNADP E++KFS+LAH+WWDP SEFRPLHEINPLRLEWIN+ APLA K VIDIGCGGGIL Sbjct: 1 MNADPLELKKFSDLAHQWWDPTSEFRPLHEINPLRLEWINSLAPLAAKTVIDIGCGGGIL 60 Query: 68 AESMAKKGADVTGIDLSDKALKVADLHSMESGVQVRYEKIAAEDMAAREAGQYDVVTCME 127 +ESMA+KGA+VTGIDLS+KALKVADLHS+ESGVQVRYE IAAEDMAAREAG++D+VTCME Sbjct: 61 SESMARKGANVTGIDLSEKALKVADLHSLESGVQVRYELIAAEDMAAREAGKFDIVTCME 120 Query: 128 MLEHVPDPAAIVRAAANLAKPGGKLFFSTLNRNMKSYVMAIIGAEYVLRLLPKGTHDYAK 187 MLEHVPDPAAIV AAA LAKPGG +FFST+NRN K+Y+ A++GAEY+LRLLPKGTHDYAK Sbjct: 121 MLEHVPDPAAIVAAAAKLAKPGGTIFFSTINRNPKAYLHAVLGAEYLLRLLPKGTHDYAK 180 Query: 188 FITPAELAHYTREAGLQIDGFKGMGYNPLTKIYSLNDDTSVNYLVACTK 236 FITPAEL+ + REAGL +D +GMG+NPLTKIYSL DTSVNYLVAC+K Sbjct: 181 FITPAELSRFAREAGLTVDTLRGMGFNPLTKIYSLTHDTSVNYLVACSK 229