BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4634.p (204 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777082.1| signal peptide protein [Herbaspirillum serop... 287 6e-76 ref|ZP_04577985.1| outer membrane protein A [Oxalobacter formige... 204 5e-51 ref|YP_004754405.1| outer membrane protein A [Collimonas fungivo... 201 4e-50 ref|ZP_04578073.1| outer membrane protein A [Oxalobacter formige... 200 1e-49 ref|ZP_08272601.1| Outer membrane protein A precursor [Oxalobact... 184 5e-45 >ref|YP_003777082.1| signal peptide protein [Herbaspirillum seropedicae SmR1] emb|CAM32584.1| signal peptide protein [Herbaspirillum seropedicae] gb|ADJ65174.1| signal peptide protein [Herbaspirillum seropedicae SmR1] Length = 203 Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats. Identities = 189/204 (92%), Positives = 189/204 (92%), Gaps = 1/204 (0%) Query: 1 MNKLAKLVFAAASAAIALSATAQETKDIKVRPGSLYLQDGRDVVTRSGYGLCWQTAYVNG 60 MNKLAKLVFAAASAAIALSATAQETKDIKVRP SLYLQDGRDVVTRSGYGLCWQTAYVNG Sbjct: 1 MNKLAKLVFAAASAAIALSATAQETKDIKVRPNSLYLQDGRDVVTRSGYGLCWQTAYVNG 60 Query: 61 PCEEPPAPAPVAAAAPAPAPAPVAAPTSEKVTYAADAFFDFDKATLKPAGKAKLDELVGN 120 P E P AAA APA AAPTSEKVTYAADAFFDFDKATLKPAGKAKLDELVGN Sbjct: 61 P-CEEPPAPAPVAAAAPAAPAAAAAPTSEKVTYAADAFFDFDKATLKPAGKAKLDELVGN 119 Query: 121 LKAINLEVIIAVGHTDSIGSVAYNQKLSVRRAESVKAYLVSKGVEANRVYTEGKGKSQPV 180 LKAINLEVIIAVGHTDSIGSVAYNQKLSVRRAESVKAYLVSKGVEANRVYTEGKGKSQPV Sbjct: 120 LKAINLEVIIAVGHTDSIGSVAYNQKLSVRRAESVKAYLVSKGVEANRVYTEGKGKSQPV 179 Query: 181 ADNKTAAGRAKNRRVEIEVVGTRK 204 ADNKTAAGRAKNRRVEIEVVGTRK Sbjct: 180 ADNKTAAGRAKNRRVEIEVVGTRK 203 >ref|ZP_04577985.1| outer membrane protein A [Oxalobacter formigenes HOxBLS] gb|EEO28947.1| outer membrane protein A [Oxalobacter formigenes HOxBLS] Length = 207 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 119/203 (58%), Positives = 143/203 (70%) Query: 1 MNKLAKLVFAAASAAIALSATAQETKDIKVRPGSLYLQDGRDVVTRSGYGLCWQTAYVNG 60 MNKL K++FAA++ A ++ T+ + +P S YLQ RDV+ RSG GLCW T Y Sbjct: 1 MNKLLKVIFAASAVVAASASAQTMTEYMAKKPYSGYLQTQRDVIVRSGTGLCWHTGYWTP 60 Query: 61 PCEEPPAPAPVAAAAPAPAPAPVAAPTSEKVTYAADAFFDFDKATLKPAGKAKLDELVGN 120 P P+ A A A PT+EKVTYAADAFFDFDK+ +KP GKAKLDELV Sbjct: 61 ADAVPGCDGPLTQPAAAAPVAVAPVPTAEKVTYAADAFFDFDKSIVKPEGKAKLDELVNA 120 Query: 121 LKAINLEVIIAVGHTDSIGSVAYNQKLSVRRAESVKAYLVSKGVEANRVYTEGKGKSQPV 180 L ++ EVI+AVGHTD IG+ AYNQKLS RRA +VKAYLVSKGV A +++TEGKGK QP+ Sbjct: 121 LSGLDTEVIVAVGHTDWIGTDAYNQKLSERRANAVKAYLVSKGVPAEKIFTEGKGKKQPI 180 Query: 181 ADNKTAAGRAKNRRVEIEVVGTR 203 ADNKT GRAKNRRVE+EVV R Sbjct: 181 ADNKTRQGRAKNRRVEVEVVANR 203 >ref|YP_004754405.1| outer membrane protein A [Collimonas fungivorans Ter331] gb|AEK63582.1| Outer membrane protein A precursor [Collimonas fungivorans Ter331] Length = 211 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 153/210 (72%), Positives = 163/210 (77%), Gaps = 8/210 (3%) Query: 1 MNKLAKLVFAAASAAIALSATAQETKDIKV-RPGSLYLQDGRDVVTRSGYGLCWQTAY-- 57 MNKLAKLVFAA++ SA+AQE KDI+ P S Y+QD R V+ R YGLCW T Y Sbjct: 1 MNKLAKLVFAASAVVAL-SASAQEIKDIQAATPNSAYVQDARGVIARDPYGLCWHTGYWT 59 Query: 58 ----VNGPCEEPPAPAPVAAAAPAPAPAPVAAPTSEKVTYAADAFFDFDKATLKPAGKAK 113 V G E AP A APAP P P AP S+KVT+AADAFFDFDKA LKP GKAK Sbjct: 60 PADSVPGCDGEIAQAAPAPAPAPAPTPVPPPAPVSQKVTFAADAFFDFDKAVLKPEGKAK 119 Query: 114 LDELVGNLKAINLEVIIAVGHTDSIGSVAYNQKLSVRRAESVKAYLVSKGVEANRVYTEG 173 LD+L L AINLEVIIAVGHTDSIGSVAYNQKLSVRRAE+VKAYLV KGVEANRVYTEG Sbjct: 120 LDDLTSKLGAINLEVIIAVGHTDSIGSVAYNQKLSVRRAEAVKAYLVHKGVEANRVYTEG 179 Query: 174 KGKSQPVADNKTAAGRAKNRRVEIEVVGTR 203 KGKSQPVADNKTAAGRAKNRRVEIEVVGTR Sbjct: 180 KGKSQPVADNKTAAGRAKNRRVEIEVVGTR 209 >ref|ZP_04578073.1| outer membrane protein A [Oxalobacter formigenes OXCC13] gb|EEO29046.1| outer membrane protein A [Oxalobacter formigenes OXCC13] Length = 207 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 116/203 (57%), Positives = 141/203 (69%) Query: 1 MNKLAKLVFAAASAAIALSATAQETKDIKVRPGSLYLQDGRDVVTRSGYGLCWQTAYVNG 60 MNKL K++FAA++ A ++ T+ + +P S YLQ RD + RSG GLCW T Y Sbjct: 1 MNKLLKVIFAASAVVAASASAQTMTEYMAKKPYSGYLQTQRDTIVRSGTGLCWHTGYWTP 60 Query: 61 PCEEPPAPAPVAAAAPAPAPAPVAAPTSEKVTYAADAFFDFDKATLKPAGKAKLDELVGN 120 P P+ A A A PT+EKVTYAADAFFDFDK+ +KP GKAKLDEL+ Sbjct: 61 ADAVPGCDGPLTQPAAAAPVAVAPVPTAEKVTYAADAFFDFDKSIVKPEGKAKLDELIKA 120 Query: 121 LKAINLEVIIAVGHTDSIGSVAYNQKLSVRRAESVKAYLVSKGVEANRVYTEGKGKSQPV 180 L ++ EVI+AVGHTD IG+ YNQKLS RRA +VKAYLVSKGV AN+++TEGKGK QP+ Sbjct: 121 LSGMDTEVIVAVGHTDWIGTDKYNQKLSERRANAVKAYLVSKGVPANKIFTEGKGKKQPI 180 Query: 181 ADNKTAAGRAKNRRVEIEVVGTR 203 A NKT GRAKNRRVE+EVV R Sbjct: 181 ASNKTREGRAKNRRVEVEVVANR 203 >ref|ZP_08272601.1| Outer membrane protein A precursor [Oxalobacteraceae bacterium IMCC9480] gb|EGF33931.1| Outer membrane protein A precursor [Oxalobacteraceae bacterium IMCC9480] Length = 214 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 132/214 (61%), Positives = 150/214 (70%), Gaps = 13/214 (6%) Query: 1 MNKLAKLVFAAASAAIALSATAQETKDIKVRPGSLYLQDGRDVVTRSGYGLCWQTAYVNG 60 MNKL KLVFAA++ SA AQE K P S Y+QD R V+ R +GLCW+T Y Sbjct: 1 MNKLVKLVFAASAVVAL-SAQAQENIQAKT-PNSAYVQDARGVIVRDPFGLCWRTGYWTP 58 Query: 61 PCEEPPAPAPVA-----------AAAPAPAPAPVAAPTSEKVTYAADAFFDFDKATLKPA 109 P +A A AP SEKVT+AADAFFDFDK+ LKP Sbjct: 59 ADAVPGCDGEIAKPVPVAVVAPAPAPAPAPVVVPPAPVSEKVTFAADAFFDFDKSVLKPD 118 Query: 110 GKAKLDELVGNLKAINLEVIIAVGHTDSIGSVAYNQKLSVRRAESVKAYLVSKGVEANRV 169 GKAKLD+L L+ +NLEVIIAVGHTDS+GS AYNQKLSVRR+E+VKAYLVSKG+EANRV Sbjct: 119 GKAKLDDLASKLQGMNLEVIIAVGHTDSVGSDAYNQKLSVRRSEAVKAYLVSKGIEANRV 178 Query: 170 YTEGKGKSQPVADNKTAAGRAKNRRVEIEVVGTR 203 YTEGKG+ QPVADNK+AAGRAKNRRVEIEVVGTR Sbjct: 179 YTEGKGEKQPVADNKSAAGRAKNRRVEIEVVGTR 212