BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4628.p (186 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777078.1| prephenate dehydrogenase [Herbaspirillum ser... 299 1e-79 ref|ZP_08274478.1| Cyclohexadienyl dehydrogenase [Oxalobacterace... 258 3e-67 ref|YP_004754399.1| prephenate dehydrogenase [Collimonas fungivo... 249 2e-64 ref|YP_001354361.1| prephenate dehydrogenase [Janthinobacterium ... 234 3e-60 ref|YP_001100820.1| prephenate dehydrogenase [Herminiimonas arse... 233 8e-60 >ref|YP_003777078.1| prephenate dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ65170.1| prephenate dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 295 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 170/186 (91%), Positives = 177/186 (95%) Query: 1 MGERIAQFVPAHPIAGREKHGPEAALAELYEGKKVVITALPENSEADVETVAAAWRACGA 60 +G+RI QF+PAHPIAGREKHGPEAALAELYEGKKVVITALPEN ADVE VAAAWRACGA Sbjct: 110 LGDRIVQFIPAHPIAGREKHGPEAALAELYEGKKVVITALPENDAADVEIVAAAWRACGA 169 Query: 61 IIHRLSPQEHDAVFASVSHLPHVLAFALVDDIAAKPHAETLFQYAASGFRDFTRIAASSP 120 +IHRLSPQEHDAVFASVSHLPHVLAFALVDDIAAKPHA TLFQYAASGFRDFTRIAASSP Sbjct: 170 VIHRLSPQEHDAVFASVSHLPHVLAFALVDDIAAKPHAATLFQYAASGFRDFTRIAASSP 229 Query: 121 EMWRDITLANRDALLTEVDAYLVQLQGIRAMIADSDGAGLEKIYASAQHARQQWAAAIEA 180 EMWRDITLANRDALLTEVDAYL+QLQ IRAMIA DG G+EKIYASAQHARQQWAAAIEA Sbjct: 230 EMWRDITLANRDALLTEVDAYLLQLQNIRAMIAAGDGPGIEKIYASAQHARQQWAAAIEA 289 Query: 181 AERKAN 186 AERKA+ Sbjct: 290 AERKAS 295 >ref|ZP_08274478.1| Cyclohexadienyl dehydrogenase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32038.1| Cyclohexadienyl dehydrogenase [Oxalobacteraceae bacterium IMCC9480] Length = 302 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 130/182 (71%), Positives = 158/182 (86%) Query: 1 MGERIAQFVPAHPIAGREKHGPEAALAELYEGKKVVITALPENSEADVETVAAAWRACGA 60 +G++I QF+P HPIAGRE++GPEAA+A+LY GKKVV+T LPENS D++ VA+AW+ACGA Sbjct: 113 LGDKIGQFIPGHPIAGREQNGPEAAIADLYSGKKVVLTTLPENSADDIDRVASAWQACGA 172 Query: 61 IIHRLSPQEHDAVFASVSHLPHVLAFALVDDIAAKPHAETLFQYAASGFRDFTRIAASSP 120 IHRLS ++HD VFA+VSHLPH+L++ALVDDIA KPHAE LFQYAASGFRDFTRIA SSP Sbjct: 173 QIHRLSAEDHDRVFAAVSHLPHLLSYALVDDIARKPHAELLFQYAASGFRDFTRIAGSSP 232 Query: 121 EMWRDITLANRDALLTEVDAYLVQLQGIRAMIADSDGAGLEKIYASAQHARQQWAAAIEA 180 EMWRDI+LAN+ ALL E+DAYL QLQG+R M+ + DGAGLE +YA+AQ AR W +AIEA Sbjct: 233 EMWRDISLANQPALLGELDAYLDQLQGLRRMLVERDGAGLEAVYANAQQARHNWISAIEA 292 Query: 181 AE 182 AE Sbjct: 293 AE 294 >ref|YP_004754399.1| prephenate dehydrogenase [Collimonas fungivorans Ter331] gb|AEK63576.1| Prephenate dehydrogenase [Collimonas fungivorans Ter331] Length = 299 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 132/184 (71%), Positives = 157/184 (85%) Query: 1 MGERIAQFVPAHPIAGREKHGPEAALAELYEGKKVVITALPENSEADVETVAAAWRACGA 60 +G +IAQFVP HPIAGRE++GPEAALAELY GKKVV+ LPEN E D+ VAAAW+ CGA Sbjct: 110 LGGKIAQFVPGHPIAGREQNGPEAALAELYVGKKVVLAPLPENGEQDIARVAAAWQQCGA 169 Query: 61 IIHRLSPQEHDAVFASVSHLPHVLAFALVDDIAAKPHAETLFQYAASGFRDFTRIAASSP 120 +IHRLSPQ+HDAVFA+VSHLPHVLA+ALVDDIA KPHA +LFQYAASGFRDFTRIA SSP Sbjct: 170 LIHRLSPQQHDAVFAAVSHLPHVLAYALVDDIANKPHAASLFQYAASGFRDFTRIAGSSP 229 Query: 121 EMWRDITLANRDALLTEVDAYLVQLQGIRAMIADSDGAGLEKIYASAQHARQQWAAAIEA 180 EMWRDI+LAN+ ALL E+DAYL+QL +R ++A DG LE +Y++AQ AR W +AIEA Sbjct: 230 EMWRDISLANQAALLGELDAYLLQLTRLRGLLAAGDGPALEAVYSNAQQARHSWISAIEA 289 Query: 181 AERK 184 AE++ Sbjct: 290 AEQQ 293 >ref|YP_001354361.1| prephenate dehydrogenase [Janthinobacterium sp. Marseille] gb|ABR88315.1| prephenate dehydrogenase [Janthinobacterium sp. Marseille] Length = 291 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 122/182 (67%), Positives = 150/182 (82%) Query: 1 MGERIAQFVPAHPIAGREKHGPEAALAELYEGKKVVITALPENSEADVETVAAAWRACGA 60 +G++IAQFVP HPIAG E +GPEAA+ +LY GKKVV+T LPENS ADV VA AW+ CGA Sbjct: 101 LGDKIAQFVPGHPIAGLEANGPEAAIPDLYVGKKVVLTPLPENSAADVALVAQAWQQCGA 160 Query: 61 IIHRLSPQEHDAVFASVSHLPHVLAFALVDDIAAKPHAETLFQYAASGFRDFTRIAASSP 120 IIH+L+ + HDAVFA+VSHLPH+LA+ALVDDIA KPHA+ LFQYAASGFRDFTRIA SSP Sbjct: 161 IIHQLTAENHDAVFAAVSHLPHLLAYALVDDIANKPHADLLFQYAASGFRDFTRIAGSSP 220 Query: 121 EMWRDITLANRDALLTEVDAYLVQLQGIRAMIADSDGAGLEKIYASAQHARQQWAAAIEA 180 EMWRDI+L+N+ A+LTE+DAY+ QL RA +A DG ++ ++A+AQ ARQ W +IE Sbjct: 221 EMWRDISLSNQGAILTELDAYIAQLTRFRAQLAAGDGEAMQAMFANAQRARQNWQRSIET 280 Query: 181 AE 182 AE Sbjct: 281 AE 282 >ref|YP_001100820.1| prephenate dehydrogenase [Herminiimonas arsenicoxydans] emb|CAL62699.1| Prephenate dehydrogenase (PDH) [Herminiimonas arsenicoxydans] Length = 300 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 120/182 (65%), Positives = 145/182 (79%) Query: 1 MGERIAQFVPAHPIAGREKHGPEAALAELYEGKKVVITALPENSEADVETVAAAWRACGA 60 +GE+I QFVP HPIAG E GP+AA+ LY G+KVV+T LPEN+ + VA AW+ CGA Sbjct: 110 LGEKIVQFVPGHPIAGLESTGPDAAIDSLYVGRKVVLTPLPENTTEQIALVARAWQQCGA 169 Query: 61 IIHRLSPQEHDAVFASVSHLPHVLAFALVDDIAAKPHAETLFQYAASGFRDFTRIAASSP 120 +IH+L+P+ HDAVFA+VSHLPH+LAFALVDDIA KPHAE LFQYAASGFRDFTRIAASSP Sbjct: 170 VIHQLTPENHDAVFAAVSHLPHLLAFALVDDIARKPHAELLFQYAASGFRDFTRIAASSP 229 Query: 121 EMWRDITLANRDALLTEVDAYLVQLQGIRAMIADSDGAGLEKIYASAQHARQQWAAAIEA 180 EMWRDI+LAN+ A+LTE+DAY+ QL R +A DGA + +++ AQ ARQ W IEA Sbjct: 230 EMWRDISLANQTAILTELDAYIAQLTRFRGQLAAGDGAAMHAMFSHAQSARQNWQRNIEA 289 Query: 181 AE 182 AE Sbjct: 290 AE 291