BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4627.p (443 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777077.1| 5-enolpyruvylshikimate-3-phosphate synthase ... 863 0.0 sp|A4G861|AROA_HERAR RecName: Full=3-phosphoshikimate 1-carboxyv... 720 0.0 ref|YP_001354360.1| 3-phosphoshikimate 1-carboxyvinyltransferase... 719 0.0 ref|YP_004754398.1| 5-Enolpyruvylshikimate-3-phosphate synthase ... 717 0.0 ref|YP_001100819.1| 3-phosphoshikimate 1-carboxyvinyltransferase... 706 0.0 >ref|YP_003777077.1| 5-enolpyruvylshikimate-3-phosphate synthase [Herbaspirillum seropedicae SmR1] gb|ADJ65169.1| 5-enolpyruvylshikimate-3-phosphate synthase (EPSP synthase) protein [Herbaspirillum seropedicae SmR1] Length = 445 Score = 863 bits (2230), Expect = 0.0, Method: Composition-based stats. Identities = 428/443 (96%), Positives = 436/443 (98%) Query: 1 MKQPSYPRHIDLNPVPHVQGTVKLPGSKSISNRILLLAALSGGTTRIFDLLASDDTLVML 60 MKQPSYPRHIDL PV HVQGTVKLPGSKSISNRILLLAALSGGTTRIFDLLASDDTLVML Sbjct: 3 MKQPSYPRHIDLAPVHHVQGTVKLPGSKSISNRILLLAALSGGTTRIFDLLASDDTLVML 62 Query: 61 MALQTLGVKWEQIEGTQDYIVHGVNGVLPVHQADLFMGNAGTAIRPLTAALAVLGGDYTL 120 MALQTLGVKWEQIEGTQDYIVHGVNGVLPVHQADLFMGNAGTAIRPLTAALAVLGGDYTL Sbjct: 63 MALQTLGVKWEQIEGTQDYIVHGVNGVLPVHQADLFMGNAGTAIRPLTAALAVLGGDYTL 122 Query: 121 HGVPRMHERPIGDLVDALNAVGMRIEYTGNPGYPPLHIRRGQLTSARMKVRGNVSSQFLT 180 HGVPRMHERPIGDLVDALNAVGMRI+YTGNPGYPPLHIRRGQLTS+RMKVRGNVSSQFLT Sbjct: 123 HGVPRMHERPIGDLVDALNAVGMRIDYTGNPGYPPLHIRRGQLTSSRMKVRGNVSSQFLT 182 Query: 181 ALLMAAPLMAREEAMQIEVVGELISKPYIEITLNLMRRFGVEVERDGWQQFTVKPGQHYR 240 ALLMAAPLMAREEAMQI+VVGELISKPYIEITLNLMRRF VEVERDGWQQF +KPGQHYR Sbjct: 183 ALLMAAPLMAREEAMQIDVVGELISKPYIEITLNLMRRFSVEVERDGWQQFIIKPGQHYR 242 Query: 241 SPGSIHVEGDASSASYFLAAGAITGGPIRVEGVGRDSIQGDVRFVEALEQMGATITMGEN 300 SPGSIHVEGDASSASYFLAAGAITGGPIRVEGVGRDSIQGDVRFVEALE MGATITMGEN Sbjct: 243 SPGSIHVEGDASSASYFLAAGAITGGPIRVEGVGRDSIQGDVRFVEALELMGATITMGEN 302 Query: 301 WIEASSNGPLKAIDADFNHIPDAAMTIAVAALYADGPSTLRNIASWRVKETDRLSAMATE 360 WIEASSNGPLKA+DADFNHIPDAAMTIAVAALYADGPSTLRNIASWRVKETDRL+AMATE Sbjct: 303 WIEASSNGPLKAVDADFNHIPDAAMTIAVAALYADGPSTLRNIASWRVKETDRLAAMATE 362 Query: 361 LRKLGAQVEEGADYLTVIPPAEIGTAAIDTYDDHRMAMCFSLAALDGALRRGNRIRINDP 420 LRKLGAQVEEGADYLTV PPAEIGTA IDTYDDHRMAMCFSLA+LDGALRRGNR+RINDP Sbjct: 363 LRKLGAQVEEGADYLTVTPPAEIGTATIDTYDDHRMAMCFSLASLDGALRRGNRVRINDP 422 Query: 421 KCVAKTFPDYFDVFKKIAEQTLI 443 KCVAKTFPDYFDVFKKIAEQTLI Sbjct: 423 KCVAKTFPDYFDVFKKIAEQTLI 445 >sp|A4G861|AROA_HERAR RecName: Full=3-phosphoshikimate 1-carboxyvinyltransferase; AltName: Full=5-enolpyruvylshikimate-3-phosphate synthase; Short=EPSP synthase; Short=EPSPS emb|CAL62698.2| 3-phosphoshikimate 1-carboxyvinyltransferase (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) [Herminiimonas arsenicoxydans] Length = 442 Score = 720 bits (1858), Expect = 0.0, Method: Composition-based stats. Identities = 351/437 (80%), Positives = 387/437 (88%) Query: 6 YPRHIDLNPVPHVQGTVKLPGSKSISNRILLLAALSGGTTRIFDLLASDDTLVMLMALQT 65 YP ++DL P H +G V+LPGSKSISNR LLLAAL+ GTT+I DLLASDDT VMLMALQ Sbjct: 5 YPHYLDLQPAMHAKGVVRLPGSKSISNRTLLLAALADGTTQIRDLLASDDTHVMLMALQK 64 Query: 66 LGVKWEQIEGTQDYIVHGVNGVLPVHQADLFMGNAGTAIRPLTAALAVLGGDYTLHGVPR 125 +GVKWEQI +QDY+VHGVNG PVHQADLFMGNAGTAIRPLTAALAV GGDYTLHGV R Sbjct: 65 IGVKWEQIGESQDYVVHGVNGAFPVHQADLFMGNAGTAIRPLTAALAVTGGDYTLHGVSR 124 Query: 126 MHERPIGDLVDALNAVGMRIEYTGNPGYPPLHIRRGQLTSARMKVRGNVSSQFLTALLMA 185 MHERPIGDLVDALNA+G IEYTG PGYPPLHI+RG++ + RM+VRGNVSSQFLTALLMA Sbjct: 125 MHERPIGDLVDALNAIGTHIEYTGEPGYPPLHIQRGRIHAQRMQVRGNVSSQFLTALLMA 184 Query: 186 APLMAREEAMQIEVVGELISKPYIEITLNLMRRFGVEVERDGWQQFTVKPGQHYRSPGSI 245 APLMARE+ + I+VVGELISKPYIEITLNLMRRFGVEV+RDGWQ FT+ GQ Y SPG I Sbjct: 185 APLMAREQDVTIDVVGELISKPYIEITLNLMRRFGVEVQRDGWQSFTIAAGQRYISPGII 244 Query: 246 HVEGDASSASYFLAAGAITGGPIRVEGVGRDSIQGDVRFVEALEQMGATITMGENWIEAS 305 HVEGDASSASYFLAAGAI GGP+RVEGVG++SIQGDVRFVE+L+QMGATITMG+NWIEA Sbjct: 245 HVEGDASSASYFLAAGAIAGGPVRVEGVGKNSIQGDVRFVESLQQMGATITMGDNWIEAK 304 Query: 306 SNGPLKAIDADFNHIPDAAMTIAVAALYADGPSTLRNIASWRVKETDRLSAMATELRKLG 365 SNG L+AIDADFNHIPDAAMTIAVAALYADG STLRNI SWRVKETDR+SAM ELRKLG Sbjct: 305 SNGALRAIDADFNHIPDAAMTIAVAALYADGTSTLRNIGSWRVKETDRISAMTIELRKLG 364 Query: 366 AQVEEGADYLTVIPPAEIGTAAIDTYDDHRMAMCFSLAALDGALRRGNRIRINDPKCVAK 425 A VEEG DYL + PPA I AAIDTYDDHRMAMCFSLA LDGA+R+G++IRINDP+CVAK Sbjct: 365 ASVEEGEDYLRITPPAVIQPAAIDTYDDHRMAMCFSLATLDGAIRKGSKIRINDPQCVAK 424 Query: 426 TFPDYFDVFKKIAEQTL 442 TFPDYF F K+ E +L Sbjct: 425 TFPDYFTAFAKVTEDSL 441 >ref|YP_001354360.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Janthinobacterium sp. Marseille] sp|A6T1G3|AROA_JANMA RecName: Full=3-phosphoshikimate 1-carboxyvinyltransferase; AltName: Full=5-enolpyruvylshikimate-3-phosphate synthase; Short=EPSP synthase; Short=EPSPS gb|ABR88781.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Janthinobacterium sp. Marseille] Length = 441 Score = 719 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 352/437 (80%), Positives = 387/437 (88%) Query: 6 YPRHIDLNPVPHVQGTVKLPGSKSISNRILLLAALSGGTTRIFDLLASDDTLVMLMALQT 65 YP ++DL P H +G V+LPGSKSISNR LLLAAL+ GTT I DLLASDDT VMLMALQ Sbjct: 4 YPHYLDLKPAMHAKGVVRLPGSKSISNRTLLLAALAQGTTHIRDLLASDDTHVMLMALQK 63 Query: 66 LGVKWEQIEGTQDYIVHGVNGVLPVHQADLFMGNAGTAIRPLTAALAVLGGDYTLHGVPR 125 LGVKWEQI +QDYIVHGV+G PVHQADLFMGNAGTAIRPLTAALAV GGDYTLHGV R Sbjct: 64 LGVKWEQIGESQDYIVHGVDGSFPVHQADLFMGNAGTAIRPLTAALAVTGGDYTLHGVSR 123 Query: 126 MHERPIGDLVDALNAVGMRIEYTGNPGYPPLHIRRGQLTSARMKVRGNVSSQFLTALLMA 185 MHERPIGDLVDALNA+G IEYTG PGYPPLHI+RG++ + M VRGNVSSQFLTALLMA Sbjct: 124 MHERPIGDLVDALNAIGTHIEYTGEPGYPPLHIQRGRIHAHEMSVRGNVSSQFLTALLMA 183 Query: 186 APLMAREEAMQIEVVGELISKPYIEITLNLMRRFGVEVERDGWQQFTVKPGQHYRSPGSI 245 APLM RE+ + I V+G+LISKPYIEITLNL++RFGVEV+R+GWQ FT+K GQ Y SPG+I Sbjct: 184 APLMTREQDVIINVIGDLISKPYIEITLNLIQRFGVEVQRNGWQSFTIKAGQRYISPGNI 243 Query: 246 HVEGDASSASYFLAAGAITGGPIRVEGVGRDSIQGDVRFVEALEQMGATITMGENWIEAS 305 HVEGDASSASYFLAAGAI GGP+RVEGVGRDSIQGDVRFVEALEQMGAT+ MG+NWIEA Sbjct: 244 HVEGDASSASYFLAAGAIAGGPVRVEGVGRDSIQGDVRFVEALEQMGATVRMGDNWIEAE 303 Query: 306 SNGPLKAIDADFNHIPDAAMTIAVAALYADGPSTLRNIASWRVKETDRLSAMATELRKLG 365 SNG L+AIDADFNHIPDAAMTIAVAALYADGPS LRNI SWRVKETDR+SAMATELRKLG Sbjct: 304 SNGVLRAIDADFNHIPDAAMTIAVAALYADGPSILRNIGSWRVKETDRISAMATELRKLG 363 Query: 366 AQVEEGADYLTVIPPAEIGTAAIDTYDDHRMAMCFSLAALDGALRRGNRIRINDPKCVAK 425 A VEEG DYL V PPAEI +AAIDTYDDHRMAMCFSLA LDGA RRGN+ RINDP+CVAK Sbjct: 364 AIVEEGEDYLKVTPPAEILSAAIDTYDDHRMAMCFSLATLDGAARRGNKERINDPQCVAK 423 Query: 426 TFPDYFDVFKKIAEQTL 442 TFP+YF+ F K+ E++L Sbjct: 424 TFPEYFEAFAKVTEESL 440 >ref|YP_004754398.1| 5-Enolpyruvylshikimate-3-phosphate synthase [Collimonas fungivorans Ter331] gb|AEK63575.1| 5-Enolpyruvylshikimate-3-phosphate synthase [Collimonas fungivorans Ter331] Length = 426 Score = 717 bits (1850), Expect = 0.0, Method: Composition-based stats. Identities = 359/426 (84%), Positives = 386/426 (90%) Query: 18 VQGTVKLPGSKSISNRILLLAALSGGTTRIFDLLASDDTLVMLMALQTLGVKWEQIEGTQ 77 +QGTV+LPGSKSISNR LLLAAL+ GTTRI DLLASDDTLVMLMAL+ LGV WEQ EGTQ Sbjct: 1 MQGTVRLPGSKSISNRTLLLAALANGTTRIHDLLASDDTLVMLMALKQLGVAWEQAEGTQ 60 Query: 78 DYIVHGVNGVLPVHQADLFMGNAGTAIRPLTAALAVLGGDYTLHGVPRMHERPIGDLVDA 137 Y VHG +G PVHQADLFMGNAGTAIRPLTAALA +GGDYTLHGV RMHERPIGDLVDA Sbjct: 61 TYTVHGSDGSFPVHQADLFMGNAGTAIRPLTAALAAMGGDYTLHGVARMHERPIGDLVDA 120 Query: 138 LNAVGMRIEYTGNPGYPPLHIRRGQLTSARMKVRGNVSSQFLTALLMAAPLMAREEAMQI 197 LNAVG RI YTG GYPPLHI+RGQL + RM+VRGNVSSQFLTALLMAAPLMA+ EA+ I Sbjct: 121 LNAVGTRIAYTGVAGYPPLHIQRGQLHTQRMQVRGNVSSQFLTALLMAAPLMAKHEAVTI 180 Query: 198 EVVGELISKPYIEITLNLMRRFGVEVERDGWQQFTVKPGQHYRSPGSIHVEGDASSASYF 257 EVVGELISKPYIEITLNLM+RFGV VERDGWQ FT+ GQ YRSP +IHVEGDASSASYF Sbjct: 181 EVVGELISKPYIEITLNLMQRFGVSVERDGWQSFTIPAGQQYRSPDTIHVEGDASSASYF 240 Query: 258 LAAGAITGGPIRVEGVGRDSIQGDVRFVEALEQMGATITMGENWIEASSNGPLKAIDADF 317 LAAGAITGGP+RVEGVG +SIQGDVRFVEAL+QMGATITMG+NWIEASSNG LKAIDADF Sbjct: 241 LAAGAITGGPLRVEGVGNNSIQGDVRFVEALQQMGATITMGDNWIEASSNGVLKAIDADF 300 Query: 318 NHIPDAAMTIAVAALYADGPSTLRNIASWRVKETDRLSAMATELRKLGAQVEEGADYLTV 377 NHIPDAAMTIAVAALYADGPSTLRNIASWRVKETDRLSAMATELRKLGA +EEG+DYL V Sbjct: 301 NHIPDAAMTIAVAALYADGPSTLRNIASWRVKETDRLSAMATELRKLGATIEEGSDYLRV 360 Query: 378 IPPAEIGTAAIDTYDDHRMAMCFSLAALDGALRRGNRIRINDPKCVAKTFPDYFDVFKKI 437 PPA++ AAIDTYDDHRMAMCFSLA+LDGA RG +RINDP+CVAKTFPDYF VF +I Sbjct: 361 TPPAQLQAAAIDTYDDHRMAMCFSLASLDGAALRGTVVRINDPQCVAKTFPDYFTVFAQI 420 Query: 438 AEQTLI 443 AEQTL+ Sbjct: 421 AEQTLL 426 >ref|YP_001100819.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Herminiimonas arsenicoxydans] Length = 428 Score = 706 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 346/426 (81%), Positives = 380/426 (89%) Query: 17 HVQGTVKLPGSKSISNRILLLAALSGGTTRIFDLLASDDTLVMLMALQTLGVKWEQIEGT 76 H +G V+LPGSKSISNR LLLAAL+ GTT+I DLLASDDT VMLMALQ +GVKWEQI + Sbjct: 2 HAKGVVRLPGSKSISNRTLLLAALADGTTQIRDLLASDDTHVMLMALQKIGVKWEQIGES 61 Query: 77 QDYIVHGVNGVLPVHQADLFMGNAGTAIRPLTAALAVLGGDYTLHGVPRMHERPIGDLVD 136 QDY+VHGVNG PVHQADLFMGNAGTAIRPLTAALAV GGDYTLHGV RMHERPIGDLVD Sbjct: 62 QDYVVHGVNGAFPVHQADLFMGNAGTAIRPLTAALAVTGGDYTLHGVSRMHERPIGDLVD 121 Query: 137 ALNAVGMRIEYTGNPGYPPLHIRRGQLTSARMKVRGNVSSQFLTALLMAAPLMAREEAMQ 196 ALNA+G IEYTG PGYPPLHI+RG++ + RM+VRGNVSSQFLTALLMAAPLMARE+ + Sbjct: 122 ALNAIGTHIEYTGEPGYPPLHIQRGRIHAQRMQVRGNVSSQFLTALLMAAPLMAREQDVT 181 Query: 197 IEVVGELISKPYIEITLNLMRRFGVEVERDGWQQFTVKPGQHYRSPGSIHVEGDASSASY 256 I+VVGELISKPYIEITLNLMRRFGVEV+RDGWQ FT+ GQ Y SPG IHVEGDASSASY Sbjct: 182 IDVVGELISKPYIEITLNLMRRFGVEVQRDGWQSFTIAAGQRYISPGIIHVEGDASSASY 241 Query: 257 FLAAGAITGGPIRVEGVGRDSIQGDVRFVEALEQMGATITMGENWIEASSNGPLKAIDAD 316 FLAAGAI GGP+RVEGVG++SIQGDVRFVE+L+QMGATITMG+NWIEA SNG L+AIDAD Sbjct: 242 FLAAGAIAGGPVRVEGVGKNSIQGDVRFVESLQQMGATITMGDNWIEAKSNGALRAIDAD 301 Query: 317 FNHIPDAAMTIAVAALYADGPSTLRNIASWRVKETDRLSAMATELRKLGAQVEEGADYLT 376 FNHIPDAAMTIAVAALYADG STLRNI SWRVKETDR+SAM ELRKLGA VEEG DYL Sbjct: 302 FNHIPDAAMTIAVAALYADGTSTLRNIGSWRVKETDRISAMTIELRKLGASVEEGEDYLR 361 Query: 377 VIPPAEIGTAAIDTYDDHRMAMCFSLAALDGALRRGNRIRINDPKCVAKTFPDYFDVFKK 436 + PPA I AAIDTYDDHRMAMCFSLA LDGA+R+G++IRINDP+CVAKTFPDYF F K Sbjct: 362 ITPPAVIQPAAIDTYDDHRMAMCFSLATLDGAIRKGSKIRINDPQCVAKTFPDYFTAFAK 421 Query: 437 IAEQTL 442 + E +L Sbjct: 422 VTEDSL 427