BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4626.p (222 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777076.1| cytidylate kinase [Herbaspirillum seropedica... 410 e-113 ref|YP_004754396.1| cytidylate kinase [Collimonas fungivorans Te... 340 1e-91 ref|YP_001100818.1| cytidine monophosphate (CMP) kinase [Hermini... 305 4e-81 ref|YP_001354359.1| cytidylate kinase [Janthinobacterium sp. Mar... 304 6e-81 ref|ZP_08274480.1| Cytidylate kinase [Oxalobacteraceae bacterium... 295 3e-78 >ref|YP_003777076.1| cytidylate kinase [Herbaspirillum seropedicae SmR1] gb|ADJ65168.1| cytidylate kinase protein [Herbaspirillum seropedicae SmR1] Length = 222 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 214/222 (96%), Positives = 219/222 (98%) Query: 1 MEKAKIPVITIDGPTASGKGTVAQKVARQLGFHYLDSGALYRLTALSVLRRGVALDDEHA 60 MEK KIPVITIDGPTASGKGTVAQKVA+QLGFHYLDSGALYRLTALSVLRRG+AL+DEHA Sbjct: 1 MEKPKIPVITIDGPTASGKGTVAQKVAQQLGFHYLDSGALYRLTALSVLRRGIALNDEHA 60 Query: 61 LAKAAEHLHCHFDGGHIFLANEDVTQAIRAEEVGNTASKIAALITVRQALYGLQLSFRKP 120 LAKAAEHLHCHFDG HIFL+NEDVTQAIRAEEVGNTASKIAALITVRQALYGLQLSFRKP Sbjct: 61 LAKAAEHLHCHFDGAHIFLSNEDVTQAIRAEEVGNTASKIAALITVRQALYGLQLSFRKP 120 Query: 121 PGLVADGRDMGTVIFPGARLKVFLTASVEARATRRYKQLIDKGFSANIEDLSRDLKERDE 180 PGLVADGRDMGTVIFPGARLKVFLTASVEARATRRYKQLIDKGFSANIEDLSRDLKERDE Sbjct: 121 PGLVADGRDMGTVIFPGARLKVFLTASVEARATRRYKQLIDKGFSANIEDLSRDLKERDE 180 Query: 181 RDMNRSSAPLKAAEGAYHLDTSDMTADEAVQQVLSWYAALGH 222 RDM+RSSAPLK AEGAYHLDTSDMTADEAVQQVLSWYAALGH Sbjct: 181 RDMSRSSAPLKPAEGAYHLDTSDMTADEAVQQVLSWYAALGH 222 >ref|YP_004754396.1| cytidylate kinase [Collimonas fungivorans Ter331] gb|AEK63573.1| Cytidylate kinase [Collimonas fungivorans Ter331] Length = 232 Score = 340 bits (871), Expect = 1e-91, Method: Composition-based stats. Identities = 184/223 (82%), Positives = 194/223 (86%), Gaps = 4/223 (1%) Query: 1 MEKAKIPVITIDGPTASGKGTVAQKVARQLGFHYLDSGALYRLTALSVLRRG----VALD 56 M IPVITIDGPTASGKGTVAQ+VA+ LGFHYLDSGALYRLTALSV+RR + LD Sbjct: 1 MSNPPIPVITIDGPTASGKGTVAQRVAQHLGFHYLDSGALYRLTALSVMRRANGNPIPLD 60 Query: 57 DEHALAKAAEHLHCHFDGGHIFLANEDVTQAIRAEEVGNTASKIAALITVRQALYGLQLS 116 DEHALAKAAEHLHCHF G HIFLANEDV+ IRAE VGN ASKIAA+ TVRQALYGLQLS Sbjct: 61 DEHALAKAAEHLHCHFSGAHIFLANEDVSNDIRAEAVGNLASKIAAIPTVRQALYGLQLS 120 Query: 117 FRKPPGLVADGRDMGTVIFPGARLKVFLTASVEARATRRYKQLIDKGFSANIEDLSRDLK 176 FR+ PGLVADGRDMGTVIFP A LKVFLTASVEARA RRYKQLIDKGFSAN+EDLS+DL Sbjct: 121 FRQHPGLVADGRDMGTVIFPHAGLKVFLTASVEARALRRYKQLIDKGFSANMEDLSKDLT 180 Query: 177 ERDERDMNRSSAPLKAAEGAYHLDTSDMTADEAVQQVLSWYAA 219 ERD RD NRSSAPLKAAEGAY LDTS MTAD+AV QVL WYAA Sbjct: 181 ERDARDSNRSSAPLKAAEGAYLLDTSAMTADQAVAQVLEWYAA 223 >ref|YP_001100818.1| cytidine monophosphate (CMP) kinase [Herminiimonas arsenicoxydans] emb|CAL62697.1| Cytidylate kinase (CK) (Cytidine monophosphate kinase) (CMP kinase) [Herminiimonas arsenicoxydans] Length = 229 Score = 305 bits (780), Expect = 4e-81, Method: Composition-based stats. Identities = 163/213 (76%), Positives = 175/213 (82%) Query: 6 IPVITIDGPTASGKGTVAQKVARQLGFHYLDSGALYRLTALSVLRRGVALDDEHALAKAA 65 IPVI IDGPTASGKGTVAQ VA QLGFHYLDSGALYRLTALS LR VAL+DE ALAK A Sbjct: 11 IPVIAIDGPTASGKGTVAQLVATQLGFHYLDSGALYRLTALSALRNAVALNDEQALAKLA 70 Query: 66 EHLHCHFDGGHIFLANEDVTQAIRAEEVGNTASKIAALITVRQALYGLQLSFRKPPGLVA 125 E L C F G IFLA E+VT AIRAEEVGN ASKIAAL +RQAL LQL FR PGL+A Sbjct: 71 ETLQCSFTNGDIFLAGENVTLAIRAEEVGNAASKIAALPALRQALVALQLRFRTAPGLIA 130 Query: 126 DGRDMGTVIFPGARLKVFLTASVEARATRRYKQLIDKGFSANIEDLSRDLKERDERDMNR 185 DGRDMGTVIFP A LKVFLTAS EARA RRYKQLIDKGFSAN++DL +DL ERD RD NR Sbjct: 131 DGRDMGTVIFPDADLKVFLTASPEARAQRRYKQLIDKGFSANMQDLLKDLNERDARDANR 190 Query: 186 SSAPLKAAEGAYHLDTSDMTADEAVQQVLSWYA 218 + APLK AEGAY LDTS++T +AV+QVL WYA Sbjct: 191 AVAPLKPAEGAYLLDTSNLTVHQAVEQVLGWYA 223 >ref|YP_001354359.1| cytidylate kinase [Janthinobacterium sp. Marseille] gb|ABR89225.1| cytidylate kinase [Janthinobacterium sp. Marseille] Length = 225 Score = 304 bits (779), Expect = 6e-81, Method: Composition-based stats. Identities = 162/217 (74%), Positives = 182/217 (83%) Query: 4 AKIPVITIDGPTASGKGTVAQKVARQLGFHYLDSGALYRLTALSVLRRGVALDDEHALAK 63 + IPVITIDGPTASGKGTVAQ VA +LGFHYLDSGALYRLTALS L RG+A+DDE A+AK Sbjct: 7 SAIPVITIDGPTASGKGTVAQLVATELGFHYLDSGALYRLTALSALYRGIAIDDEQAVAK 66 Query: 64 AAEHLHCHFDGGHIFLANEDVTQAIRAEEVGNTASKIAALITVRQALYGLQLSFRKPPGL 123 + E L+C F G IFL E+VT +IRAEEVGNTASKIAAL VR+AL LQL FR+ PGL Sbjct: 67 SVETLNCGFKDGDIFLDRENVTMSIRAEEVGNTASKIAALPAVRKALVDLQLRFREAPGL 126 Query: 124 VADGRDMGTVIFPGARLKVFLTASVEARATRRYKQLIDKGFSANIEDLSRDLKERDERDM 183 +ADGRDMGTVIFP A+LKVFLTAS EARA RRYKQLIDKGFSANIEDL +DL ERD RD Sbjct: 127 IADGRDMGTVIFPDAKLKVFLTASAEARAERRYKQLIDKGFSANIEDLLKDLNERDARDA 186 Query: 184 NRSSAPLKAAEGAYHLDTSDMTADEAVQQVLSWYAAL 220 NR+ APLK AE AY LDTS++T +AV QVL+WYAA+ Sbjct: 187 NRAIAPLKPAEEAYLLDTSNLTVQQAVDQVLAWYAAV 223 >ref|ZP_08274480.1| Cytidylate kinase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32040.1| Cytidylate kinase [Oxalobacteraceae bacterium IMCC9480] Length = 231 Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats. Identities = 159/219 (72%), Positives = 177/219 (80%) Query: 1 MEKAKIPVITIDGPTASGKGTVAQKVARQLGFHYLDSGALYRLTALSVLRRGVALDDEHA 60 M IPVITIDGPTASGKGTVA VA +LG HYLDSGALYRLTALS +R+ + DEH Sbjct: 1 MPLTTIPVITIDGPTASGKGTVAHLVAVRLGLHYLDSGALYRLTALSAMRKHIEPTDEHG 60 Query: 61 LAKAAEHLHCHFDGGHIFLANEDVTQAIRAEEVGNTASKIAALITVRQALYGLQLSFRKP 120 LAKAA L+CHF+G H+FL+NEDV+ AIRAEEVGN AS+IA L TVRQALY LQL FR P Sbjct: 61 LAKAAAGLNCHFNGEHVFLSNEDVSAAIRAEEVGNLASRIATLPTVRQALYALQLGFRSP 120 Query: 121 PGLVADGRDMGTVIFPGARLKVFLTASVEARATRRYKQLIDKGFSANIEDLSRDLKERDE 180 PGLVADGRDMGTVIFP A LKVFLTAS EARA RR+KQLI KG SA + DL +DL ERD Sbjct: 121 PGLVADGRDMGTVIFPRATLKVFLTASAEARAERRFKQLIAKGMSATMHDLLKDLNERDA 180 Query: 181 RDMNRSSAPLKAAEGAYHLDTSDMTADEAVQQVLSWYAA 219 RD NR+ APLK AE AY L+TS+MTA+ AV QVL+WYAA Sbjct: 181 RDANRTIAPLKPAEDAYLLETSNMTAEAAVTQVLAWYAA 219