BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4621.p (336 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_02366155.1| pentapeptide repeat family protein, putative ... 213 3e-53 ref|ZP_02359086.1| pentapeptide repeat family protein, putative ... 213 3e-53 ref|YP_001076067.1| pentapeptide repeat-containing protein [Burk... 202 7e-50 ref|ZP_04900043.1| pentapeptide repeat protein [Burkholderia pse... 201 1e-49 ref|ZP_01768828.1| pentapeptide repeat protein [Burkholderia pse... 201 1e-49 >ref|ZP_02366155.1| pentapeptide repeat family protein, putative [Burkholderia oklahomensis C6786] Length = 354 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 141/334 (42%), Positives = 189/334 (56%), Gaps = 20/334 (5%) Query: 16 RRLSDIDLSGADLSGRDLSGCTLINVRLANARLSSANLANAYLQNVDLSGANLEGVQAAQ 75 R LS +DLS ADLS RDLSGCT V L A LS++ L + DL+GA ++G Sbjct: 16 RTLSGVDLSHADLSRRDLSGCTFDRVILRGANLSASQLDTTCWLHCDLTGARVDGATLGG 75 Query: 76 ASFNEVDLNAAQLQR----------AELLQAT----------FGHCRLDGAILAGAQLVR 115 +S++EV L+AA L+ A+L +AT F C L A AGA+L+R Sbjct: 76 SSWHEVALHAASLRATTGAAFAMTDADLAEATLADALWARSTFERCDLAAAQCAGAKLLR 135 Query: 116 CDMNEVTLLNTDLSGANLTRWTAMHTDLSSVRLAGAVLTQAFLKDSQLQAQNFAGCDLTM 175 C+ + +TD + A L R+ AMH DLSS R LT A L ++ L+ Q F CDLTM Sbjct: 136 CEAVDCRFEHTDFANAELERFAAMHADLSSARFDATRLTNALLTNADLRGQRFDHCDLTM 195 Query: 176 TMFVNAQLQQADFTSARLDRTSFMGAQLQQANLAGTRSSYLCFIDAQAQQVNLAGAAFEM 235 T F A+L +DF+ A L +T F A L++A LAG R ++ F DA +L+GAAF+ Sbjct: 196 THFNGAKLSGSDFSGASLVQTMFFDADLERATLAGARGRHVRFADATLVGADLSGAAFDE 255 Query: 236 SDASQADFSEAKAAGVSWHMSVHQKTLWKRAQLKGSAWVHCDLSHADFSEADCSQADLGG 295 +D ++A S A A G+ MS+ A L G ++V+CD SHA S ADC+ AD Sbjct: 256 TDFARARLSSANARGLRARMSLFAHADCADATLAGGSFVYCDFSHAKLSRADCTDADFSH 315 Query: 296 ANIHGLLQQNTRWDGTNFDGVRPTDPLLERAERW 329 AN+H + + RWDGT G RPTDP L +AERW Sbjct: 316 ANLHAVDDRAARWDGTRKTGARPTDPTLAQAERW 349 >ref|ZP_02359086.1| pentapeptide repeat family protein, putative [Burkholderia oklahomensis EO147] Length = 354 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 141/334 (42%), Positives = 189/334 (56%), Gaps = 20/334 (5%) Query: 16 RRLSDIDLSGADLSGRDLSGCTLINVRLANARLSSANLANAYLQNVDLSGANLEGVQAAQ 75 R LS +DLS ADLS RDLSGCT V L A LS++ L + DL+GA ++G Sbjct: 16 RTLSGVDLSYADLSRRDLSGCTFDRVILRGANLSASQLDTTCWLHCDLTGARVDGATLGG 75 Query: 76 ASFNEVDLNAAQLQR----------AELLQAT----------FGHCRLDGAILAGAQLVR 115 +S++EV L+AA L+ A+L +AT F C L A AGA+L+R Sbjct: 76 SSWHEVALHAASLRATTGAAFAMTDADLAEATLADALWARSTFERCDLAAAQCAGAKLLR 135 Query: 116 CDMNEVTLLNTDLSGANLTRWTAMHTDLSSVRLAGAVLTQAFLKDSQLQAQNFAGCDLTM 175 C+ + +TD + A L R+ AMH DLSS R LT A L ++ L+ Q F CDLTM Sbjct: 136 CEAVDCRFEHTDFANAELERFAAMHADLSSARFDATRLTNALLTNADLRGQRFDHCDLTM 195 Query: 176 TMFVNAQLQQADFTSARLDRTSFMGAQLQQANLAGTRSSYLCFIDAQAQQVNLAGAAFEM 235 T F A+L +DF+ A L +T F A L++A LAG R ++ F DA +L+GAAF+ Sbjct: 196 THFNGAKLSGSDFSGASLVQTMFFDADLERATLAGARGRHVRFADATLVGADLSGAAFDE 255 Query: 236 SDASQADFSEAKAAGVSWHMSVHQKTLWKRAQLKGSAWVHCDLSHADFSEADCSQADLGG 295 +D ++A S A A G+ MS+ A L G ++V+CD SHA S ADC+ AD Sbjct: 256 TDFARARLSSANARGLRARMSLFAHADCADATLAGGSFVYCDFSHAKLSRADCTDADFSH 315 Query: 296 ANIHGLLQQNTRWDGTNFDGVRPTDPLLERAERW 329 AN+H + + RWDGT G RPTDP L +AERW Sbjct: 316 ANLHAVDDRAARWDGTRKTGARPTDPTLAQAERW 349 >ref|YP_001076067.1| pentapeptide repeat-containing protein [Burkholderia pseudomallei 1106a] ref|ZP_02475660.1| pentapeptide repeat protein [Burkholderia pseudomallei B7210] ref|ZP_04809965.1| pentapeptide repeat protein [Burkholderia pseudomallei 1106b] gb|ABN94859.1| pentapeptide repeat protein [Burkholderia pseudomallei 1106a] gb|EES20590.1| pentapeptide repeat protein [Burkholderia pseudomallei 1106b] Length = 354 Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 138/338 (40%), Positives = 173/338 (51%), Gaps = 20/338 (5%) Query: 12 LAQERRLSDIDLSGADLSGRDLSGCTLINVRLANARLSSANLANAYLQNVDLSGANLEGV 71 LA R L+ IDLS ADLSGRDLSGCT V L A LS+A L + DL+GA L+G Sbjct: 12 LADTRTLTGIDLSDADLSGRDLSGCTFERVSLRGANLSAAQLDATRWLHCDLTGARLDGA 71 Query: 72 QAAQASF--------------------NEVDLNAAQLQRAELLQATFGHCRLDGAILAGA 111 ++S+ E DL A L A +ATF A A Sbjct: 72 TLGESSWYAVALRAASLRATTGDAFAMTETDLAGATLTDALWARATFERGDFSAAQCGRA 131 Query: 112 QLVRCDMNEVTLLNTDLSGANLTRWTAMHTDLSSVRLAGAVLTQAFLKDSQLQAQNFAGC 171 +L+RC+ + TD + A L R+ AM +LSS R LT AF ++ L+ Q F C Sbjct: 132 KLLRCEAADCRFERTDFANAELERFVAMRAELSSARFDATRLTHAFFAEANLRGQRFERC 191 Query: 172 DLTMTMFVNAQLQQADFTSARLDRTSFMGAQLQQANLAGTRSSYLCFIDAQAQQVNLAGA 231 DLTMT F A L DF+ A L +T F A L++A LAG R ++ F A NLA A Sbjct: 192 DLTMTHFSRAALAGCDFSGASLMQTMFFDADLERATLAGARGRHVRFAGATLDGANLAHA 251 Query: 232 AFEMSDASQADFSEAKAAGVSWHMSVHQKTLWKRAQLKGSAWVHCDLSHADFSEADCSQA 291 AF+ SD ++A A A G+ MS+ +A L G +V+CD SHA S ADC+ A Sbjct: 252 AFDESDFARARLRTANARGLRARMSLFAHADCAKATLAGGHFVYCDFSHATLSHADCTGA 311 Query: 292 DLGGANIHGLLQQNTRWDGTNFDGVRPTDPLLERAERW 329 D AN+HGL RWDG G R TDP L AERW Sbjct: 312 DFSHANLHGLADHAARWDGARKTGARATDPALAHAERW 349 >ref|ZP_04900043.1| pentapeptide repeat protein [Burkholderia pseudomallei S13] gb|EDS83055.1| pentapeptide repeat protein [Burkholderia pseudomallei S13] Length = 354 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 138/338 (40%), Positives = 173/338 (51%), Gaps = 20/338 (5%) Query: 12 LAQERRLSDIDLSGADLSGRDLSGCTLINVRLANARLSSANLANAYLQNVDLSGANLEGV 71 LA R L+ IDLS ADLSGRDLSGCT V L A LS+A L + DL+GA L+G Sbjct: 12 LADTRTLTGIDLSDADLSGRDLSGCTFERVSLRGANLSAAQLDATRWLHCDLTGARLDGA 71 Query: 72 QAAQASF--------------------NEVDLNAAQLQRAELLQATFGHCRLDGAILAGA 111 ++S+ E DL A L A +ATF A A Sbjct: 72 TLGESSWYAVALRAASLRATTGDAFAMTETDLAGATLTDALWARATFERGDFSAAQCGRA 131 Query: 112 QLVRCDMNEVTLLNTDLSGANLTRWTAMHTDLSSVRLAGAVLTQAFLKDSQLQAQNFAGC 171 +L+RC+ + +TD + A L R+ AM +LSS R LT AF ++ L+ Q F C Sbjct: 132 KLLRCEAADCRFEHTDFANAELERFVAMRAELSSARFDATRLTHAFFAEANLRGQRFERC 191 Query: 172 DLTMTMFVNAQLQQADFTSARLDRTSFMGAQLQQANLAGTRSSYLCFIDAQAQQVNLAGA 231 DLTMT F A L DF+ A L +T F A L++A LAG R ++ F A NLA A Sbjct: 192 DLTMTHFSRAALAGCDFSGASLMQTMFFDADLERATLAGARGRHVRFAGATLDGANLAHA 251 Query: 232 AFEMSDASQADFSEAKAAGVSWHMSVHQKTLWKRAQLKGSAWVHCDLSHADFSEADCSQA 291 AF+ SD ++A A A G+ MS+ A L G +V+CD SHA S ADC+ A Sbjct: 252 AFDESDFARARLRTANARGLRARMSLFAHADCAEATLAGGHFVYCDFSHATLSHADCTGA 311 Query: 292 DLGGANIHGLLQQNTRWDGTNFDGVRPTDPLLERAERW 329 D AN+HGL RWDG G R TDP L AERW Sbjct: 312 DFSHANLHGLADHAARWDGARKTGARATDPALAHAERW 349 >ref|ZP_01768828.1| pentapeptide repeat protein [Burkholderia pseudomallei 305] ref|ZP_02407414.1| pentapeptide repeat protein [Burkholderia pseudomallei DM98] ref|ZP_02460167.1| pentapeptide repeat protein [Burkholderia pseudomallei 9] ref|ZP_03791546.1| pentapeptide repeat protein [Burkholderia pseudomallei Pakistan 9] gb|EBA46739.1| pentapeptide repeat protein [Burkholderia pseudomallei 305] gb|EEH27854.1| pentapeptide repeat protein [Burkholderia pseudomallei Pakistan 9] Length = 354 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 138/338 (40%), Positives = 173/338 (51%), Gaps = 20/338 (5%) Query: 12 LAQERRLSDIDLSGADLSGRDLSGCTLINVRLANARLSSANLANAYLQNVDLSGANLEGV 71 LA R L+ IDLS ADLSGRDLSGCT V L A LS+A L + DL+GA L+G Sbjct: 12 LADTRTLTGIDLSDADLSGRDLSGCTFERVSLRGANLSAAQLDATRWLHCDLTGARLDGA 71 Query: 72 QAAQASFN--------------------EVDLNAAQLQRAELLQATFGHCRLDGAILAGA 111 ++S++ E DL A L A +ATF A A Sbjct: 72 TLGESSWHAVALRAASLRATTGDAFAMTETDLAGATLTDALWARATFERGDFSAAQCGRA 131 Query: 112 QLVRCDMNEVTLLNTDLSGANLTRWTAMHTDLSSVRLAGAVLTQAFLKDSQLQAQNFAGC 171 +L+RC+ + TD + A L R+ AM +LSS R LT AF ++ L+ Q F C Sbjct: 132 KLLRCEAADCRFERTDFANAELERFVAMRAELSSARFDATRLTHAFFAEANLRGQRFERC 191 Query: 172 DLTMTMFVNAQLQQADFTSARLDRTSFMGAQLQQANLAGTRSSYLCFIDAQAQQVNLAGA 231 DLTMT F A L DF+ A L +T F A L++A LAG R ++ F A NLA A Sbjct: 192 DLTMTHFSRAALAGCDFSGASLMQTMFFDADLERATLAGARGRHVRFAGATLDGANLAHA 251 Query: 232 AFEMSDASQADFSEAKAAGVSWHMSVHQKTLWKRAQLKGSAWVHCDLSHADFSEADCSQA 291 AF+ SD ++A A A G+ MS+ A L G +V+CD SHA S ADC+ A Sbjct: 252 AFDESDFARARLRTANARGLRARMSLFAHADCAEATLAGGHFVYCDFSHATLSHADCTGA 311 Query: 292 DLGGANIHGLLQQNTRWDGTNFDGVRPTDPLLERAERW 329 D AN+HGL RWDG G R TDP L AERW Sbjct: 312 DFSHANLHGLADHAARWDGARKTGARATDPALAHAERW 349