BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4610.p (879 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08423467.1| type VI secretion ATPase, ClpV1 family [Desul... 1029 0.0 ref|YP_002990030.1| ATPase AAA [Desulfovibrio salexigens DSM 263... 1023 0.0 ref|ZP_01286945.1| AAA ATPase, central region:Clp, N terminal [d... 974 0.0 gb|EES52234.1| ATPase AAA-2 domain protein [Leptospirillum ferro... 965 0.0 ref|YP_439061.1| ATP-dependent Clp protease, ATP-binding subunit... 926 0.0 >ref|ZP_08423467.1| type VI secretion ATPase, ClpV1 family [Desulfovibrio africanus str. Walvis Bay] gb|EGJ50572.1| type VI secretion ATPase, ClpV1 family [Desulfovibrio africanus str. Walvis Bay] Length = 874 Score = 1029 bits (2661), Expect = 0.0, Method: Composition-based stats. Identities = 535/879 (60%), Positives = 666/879 (75%), Gaps = 5/879 (0%) Query: 1 MLLVELKPLVGRLNGYSKQALEDGVGLCVSRGHYEITVEHLLVKLLDDLQSDIVLMLRQH 60 M+ V++K L+ RL +S AL++ GLCVSR +YE+TVEH +K LDD SD+ L+LR+ Sbjct: 1 MIDVDIKALLSRLGPFSTTALQNAAGLCVSRTNYEVTVEHFFLKCLDDAGSDMPLILRRF 60 Query: 61 GVDAALVRRALEKSIEDMRTGNAGRPAFSPLLLELLQDAWLIASVNLFESRIRSGAILLA 120 +D + AL S+ED + GNA RP FSPLL+EL + AWLIAS+ L E+RIRS A+LLA Sbjct: 61 AIDQGRLSEALLDSLEDFKAGNASRPVFSPLLIELFEAAWLIASLELCETRIRSAAVLLA 120 Query: 121 FLARATYYATGDYATPLRALNRETLLASFGQICSASIEETAAAADAPGGGEAAGAPAGDG 180 FLA+ ++ +G + +R ++R+ L A G + S E AA APG G GAPAG Sbjct: 121 FLAKPAFFGSGRWMDMVREISRDALKAELGNLLKGSTE---GAAPAPGSGAKDGAPAGAE 177 Query: 181 SAIARFCENFTDKARAGKIDPVFGRDMEIRQMVDILARRRKNNPICVGDPGVGKTAVVEG 240 +A++C +FT KAR GKIDPVFGRD EIRQ+VDILARRRKNNPI VGDPGVGKTAV+EG Sbjct: 178 DFLAKYCTDFTAKAREGKIDPVFGRDAEIRQIVDILARRRKNNPILVGDPGVGKTAVMEG 237 Query: 241 LALRIVTGDVPDSLKEVTILGLDMGLLQAGASVKGEFENRLKGVITEIKSSPKPIILFID 300 LALR+V GDVP+SL VT+LGL+MG L+AGA +KGEFE RL+G++ +K+S +PIILFID Sbjct: 238 LALRVVEGDVPESLTGVTLLGLEMGALEAGAGMKGEFERRLQGLLNAVKASERPIILFID 297 Query: 301 EAHTLIGAGGQAGTSDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQLVKL 360 EAHTLIGAGG G SDAANLLKPALARGE++T AATTW+EYKKYFEKDAALARRFQLV+L Sbjct: 298 EAHTLIGAGGATGGSDAANLLKPALARGEIKTCAATTWSEYKKYFEKDAALARRFQLVRL 357 Query: 361 DEPDLATAVLILRGLKEKYEDVHHVVMRDDAIIAAAELSSRYITGRQLPDKAVDLLDTAC 420 +EP + TA LILRGL++ YE H VV+RDDA+ AAA S RYI+GR LPDKA+DLLDT+C Sbjct: 358 EEPSVQTAALILRGLRDSYEKCHKVVIRDDAMEAAAVFSDRYISGRFLPDKAIDLLDTSC 417 Query: 421 ARVKVLQSAKPDVLEDKERLIQALQREKGGLERDRDNLQPVDLARLDDIDGLLATAEEQA 480 ARVKV +AKP VLEDKER IQAL+REK L+RD N VD R + I + QA Sbjct: 418 ARVKVNLTAKPAVLEDKERSIQALEREKRALDRDLANGVAVDKERQEMIVKRIGEFTAQA 477 Query: 481 EALRQVWQGQKAAADALLAARAARKKARDEGASEEELARLVQEIEAASDAFKTAQGKEPL 540 E +RQ W ++ AA A+LA RA +G S+ E L + A A Q +PL Sbjct: 478 EEIRQRWLKEQEAAKAVLALRAQLHDVGQDGKSQFE--NLKARLADADKALAELQKDDPL 535 Query: 541 VRVDVDPDVVAKVISDWTGIPVGKMLRDQAATVMHMARTLSERVRGQDHAMHQIGEILKT 600 +R++V PD+VA+V+SDWTGIP+GK+ RD+A T++H+ L R+RGQDHA+ + +++ Sbjct: 536 IRIEVCPDLVAQVVSDWTGIPLGKVQRDEAQTIIHLEDRLKARIRGQDHALESLAHVIRA 595 Query: 601 AQSGLRDPQQPLGVFLLAGPSGVGKTETALSVADILFGDEKSTVIINMSEFQEKHNVSRL 660 A+SG+++P QP+GVFLL GPSGVGKTET L++A++LFG EKS V INMSEFQEKH VSRL Sbjct: 596 AKSGIKNPNQPMGVFLLVGPSGVGKTETGLALAELLFGGEKSVVTINMSEFQEKHTVSRL 655 Query: 661 IGSPPGYVGYGEGGVLTEAVRQRPYSVVLLDEVEKAHLDVMNLFYQVFDKGMLSDGEGKE 720 IGSPPGYVGYGEGG+LTEAVR+ PYSVVLLDEVEKAH+DV+N+FYQVFDKGML+DGEGK Sbjct: 656 IGSPPGYVGYGEGGMLTEAVRRNPYSVVLLDEVEKAHVDVLNIFYQVFDKGMLADGEGKV 715 Query: 721 IDFSNTVIFLTSNLATDVITEMTAGDDRPDHDTLLSAVRPILSAHFKPALLARMTVIPYF 780 I+F NTVI LTSNL TDVI EM G++RP + +++AVRPILS HFKPALLARMTVIPY+ Sbjct: 716 INFKNTVIMLTSNLGTDVIQEMAPGEERPPSEAVMAAVRPILSQHFKPALLARMTVIPYY 775 Query: 781 TLARDALAGIVRLKMNKIVSRLLHNNKMKFTYTDAVVEQIASRCTEVETGARNIDFILRG 840 +L A+ IV LK+ K+ L+ NN+M T+ DAV +QI +RCTEVETGARNI++IL G Sbjct: 776 SLPPSAMRLIVELKLGKLRQTLMDNNRMAMTWADAVSDQITARCTEVETGARNIEYILNG 835 Query: 841 TVMPLMSQEILSRMSGEVQPAAITLDVAEDGTFKVDFPA 879 V+P MSQ ILS MS PA + LDVA DG F + F A Sbjct: 836 NVLPQMSQMILSHMSEGGMPAKVHLDVAGDGGFSMVFGA 874 >ref|YP_002990030.1| ATPase AAA [Desulfovibrio salexigens DSM 2638] gb|ACS78491.1| type VI secretion ATPase, ClpV1 family [Desulfovibrio salexigens DSM 2638] Length = 881 Score = 1023 bits (2644), Expect = 0.0, Method: Composition-based stats. Identities = 535/884 (60%), Positives = 677/884 (76%), Gaps = 9/884 (1%) Query: 1 MLLVELKPLVGRLNGYSKQALEDGVGLCVSRGHYEITVEHLLVKLLDDLQSDIVLMLRQH 60 M+ V+++ L+ +L+ + AL + GL VS +YE++VEH +K ++++ SD+ L+ RQ+ Sbjct: 1 MINVDIRNLLSKLDTFCTNALHNAAGLSVSLSNYEVSVEHFFIKCVEEVNSDLPLIFRQY 60 Query: 61 GVDAALVRRALEKSIEDMRTGNAGRPAFSPLLLELLQDAWLIASVNLFESRIRSGAILLA 120 GV+ + AL ++D +TGN+G+P FSP+LLEL +DAWLI+SV L E+RIRSGA+LLA Sbjct: 61 GVETPRITAALTDVLQDFKTGNSGKPVFSPMLLELFEDAWLISSVELGETRIRSGAVLLA 120 Query: 121 FLARATYYATGDYATPLRALNRETLLASFGQICSASIEETAAAADAPGGGEAAGAPAGDG 180 FL + +YA+G+YA A+NRETLL F + S+E AA APG EA+ G+G Sbjct: 121 FLGKPNFYASGNYADLFSAINRETLLKEFWTVTKGSVEYKMPAA-APG--EASAPAKGEG 177 Query: 181 SAIARFCENFTDKARAGKIDPVFGRDMEIRQMVDILARRRKNNPICVGDPGVGKTAVVEG 240 I RFC +FT KAR G IDPVFGRD E+RQMVDILARRRKNNPI VG+PGVGKTAV+EG Sbjct: 178 GFIERFCIDFTAKAREGGIDPVFGRDPEMRQMVDILARRRKNNPILVGEPGVGKTAVIEG 237 Query: 241 LALRIVTGDVPDSLKEVTILGLDMGLLQAGASVKGEFENRLKGVITEIKSSPKPIILFID 300 LALRI GDVP+ L +VT+LGLDMGLL+AGA +KGEFENRLKGVI EIKSS PIILFID Sbjct: 238 LALRITEGDVPEILSDVTLLGLDMGLLEAGAGMKGEFENRLKGVIDEIKSSETPIILFID 297 Query: 301 EAHTLIGAGGQAGTSDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQLVKL 360 EAHTL+GAGG AG +DAANLLKPALARGEL+T AATTW EYKKYFEKD ALARRFQLVKL Sbjct: 298 EAHTLVGAGGSAGGADAANLLKPALARGELKTCAATTWTEYKKYFEKDPALARRFQLVKL 357 Query: 361 DEPDLATAVLILRGLKEKYEDVHHVVMRDDAIIAAAELSSRYITGRQLPDKAVDLLDTAC 420 DEP + T+ +ILRGL+E YE H+V++RDDA +AAA S RYI GR LPDKA+DLLDT C Sbjct: 358 DEPSVDTSTIILRGLRESYEKAHNVIIRDDANVAAAVYSDRYIAGRFLPDKAIDLLDTTC 417 Query: 421 ARVKVLQSAKPDVLEDKERLIQALQREKGGLERDRDNLQPVDLARLDDIDGLLATAEEQA 480 ARVKV SAKP LED +R++QAL+REK ++RDR N VD D+ + +A Sbjct: 418 ARVKVNLSAKPGRLEDCQRVVQALEREKKAVDRDRSNAVEVDEDHYKDLLAQIEAKNAEA 477 Query: 481 EALRQVWQGQKAAADALLAARAARKKARD-EGASEEELARLVQEIEAASDAFKTAQGKEP 539 + + W +K AA A+L RA ++AR+ E E+ L++L +++ A A Q +P Sbjct: 478 AEISEKWLKEKDAAHAVLDVRAQIQEARNAEPIDEDGLSKLKDDLDKADAALTNLQSDDP 537 Query: 540 LVRVDVDPDVVAKVISDWTGIPVGKMLRDQAATVMHMARTLSERVRGQDHAMHQIGEILK 599 +V+++V PD+V +V+SDWTGIPVGKM RD+AATV + L R++GQD + I E+++ Sbjct: 538 MVQIEVTPDLVGRVVSDWTGIPVGKMARDEAATVADLDDKLKVRIKGQDQGLASIAEVIR 597 Query: 600 TAQSGLRDPQQPLGVFLLAGPSGVGKTETALSVADILFGDEKSTVIINMSEFQEKHNVSR 659 +++G+++P QP+GVFLL GPSGVGKTET LS+AD+LFGDE+S V +NMSEFQEKH VSR Sbjct: 598 ASKAGIKNPDQPIGVFLLVGPSGVGKTETGLSLADLLFGDERSVVTVNMSEFQEKHTVSR 657 Query: 660 LIGSPPGYVGYGEGGVLTEAVRQRPYSVVLLDEVEKAHLDVMNLFYQVFDKGMLSDGEGK 719 LIGSPPGYVGYGEGG+LTEAVR++PYSVVLLDEVEKAHLDVMN FYQVFDKG+L+DGEGK Sbjct: 658 LIGSPPGYVGYGEGGMLTEAVRRQPYSVVLLDEVEKAHLDVMNTFYQVFDKGVLTDGEGK 717 Query: 720 EIDFSNTVIFLTSNLATDVITEMTA----GDDRPDHDTLLSAVRPILSAHFKPALLARMT 775 +I+F NT++ LTSNL TDVI EMTA GD+ P D +LSAVRPILS HFKPALLARM Sbjct: 718 DINFRNTILILTSNLGTDVIQEMTASLDPGDEMP-MDAVLSAVRPILSQHFKPALLARMN 776 Query: 776 VIPYFTLARDALAGIVRLKMNKIVSRLLHNNKMKFTYTDAVVEQIASRCTEVETGARNID 835 V+PYF+L +A+ I +LK+ K+ LL NNKMK +Y D+VV+QIA+RCTEVETGARNI+ Sbjct: 777 VVPYFSLNPEAMKLITKLKLGKLEKMLLANNKMKLSYDDSVVDQIAARCTEVETGARNIE 836 Query: 836 FILRGTVMPLMSQEILSRMSGEVQPAAITLDVAEDGTFKVDFPA 879 +IL G V+P MS+EIL M+ PAA+ L V EDG+F ++F A Sbjct: 837 YILNGNVLPKMSKEILIHMTEGGMPAAVHLGVDEDGSFNMEFSA 880 >ref|ZP_01286945.1| AAA ATPase, central region:Clp, N terminal [delta proteobacterium MLMS-1] gb|EAT06612.1| AAA ATPase, central region:Clp, N terminal [delta proteobacterium MLMS-1] Length = 878 Score = 974 bits (2519), Expect = 0.0, Method: Composition-based stats. Identities = 539/880 (61%), Positives = 659/880 (74%), Gaps = 6/880 (0%) Query: 1 MLLVELKPLVGRLNGYSKQALEDGVGLCVSRGHYEITVEHLLVKLLDDLQSDIVLMLRQH 60 M+ V++K L+ + N Y+ QAL GL V+R HYE+TVEHLL+ L+D +DI L L + Sbjct: 1 MIGVDMKALLEKCNSYTTQALHTAAGLTVNRTHYEVTVEHLLLSCLEDQSADIPLALARF 60 Query: 61 GVDAALVRRALEKSIEDMRTGNAGRPAFSPLLLELLQDAWLIASVNLFESRIRSGAILLA 120 GVD+ ++ AL S+ED R GN+ RP FSPLL+ELL+ AWL+ASV+L RIRSGA+LLA Sbjct: 61 GVDSGRLKAALNDSMEDFRAGNSSRPVFSPLLMELLEAAWLVASVDLGLGRIRSGAVLLA 120 Query: 121 FLARATYYATGDYATPLRALNRETLLASFGQICSASIEETAAAADAPGGGEAAGAPAGDG 180 FL + YA G Y + +NRE L F ++ S E + AP G A A Sbjct: 121 FLRKPALYAQGGYTDQIGLINREELQKKFWELAKVSSESAGESGSAPATGAADQGGAAGA 180 Query: 181 ---SAIARFCENFTDKARAGKIDPVFGRDMEIRQMVDILARRRKNNPICVGDPGVGKTAV 237 S IA+FCE+FT KA+ GKID VFGRD EIRQ+VDILARRRKNNPI VG+PGVGKTAV Sbjct: 181 GGESFIAKFCEDFTAKAQNGKIDAVFGRDQEIRQIVDILARRRKNNPILVGEPGVGKTAV 240 Query: 238 VEGLALRIVTGDVPDSLKEVTILGLDMGLLQAGASVKGEFENRLKGVITEIKSSPKPIIL 297 +EGLALRI+ GDVP+ L VT+LGLDMGLL+AGA +KGEFE RLKGV+ EIK+S KPIIL Sbjct: 241 IEGLALRIIEGDVPEVLAGVTLLGLDMGLLEAGAGMKGEFERRLKGVLDEIKASEKPIIL 300 Query: 298 FIDEAHTLIGAGGQAGTSDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQL 357 FIDEAHTL+GAGG AG SDAANLLKPALARGE++T AATTW EY+KYFEKD ALARRFQL Sbjct: 301 FIDEAHTLVGAGGSAGGSDAANLLKPALARGEIKTCAATTWKEYQKYFEKDPALARRFQL 360 Query: 358 VKLDEPDLATAVLILRGLKEKYEDVHHVVMRDDAIIAAAELSSRYITGRQLPDKAVDLLD 417 VKLDEP + T+ LILRG+++ YE H VV+RDDAI AAAE ++RYITGR LPDKA+DL+D Sbjct: 361 VKLDEPGVKTSALILRGIRDSYEKAHQVVIRDDAIEAAAEFANRYITGRFLPDKAIDLMD 420 Query: 418 TACARVKVLQSAKPDVLEDKERLIQALQREKGGLERDRDNLQPVDLARLDDIDGLLATAE 477 TACARVKV ++KP LEDKER IQA RE+ L RDR N PVD RL + + + Sbjct: 421 TACARVKVSLASKPGALEDKERAIQAAGREQKALVRDRTNGAPVDEERLGALAETITSLT 480 Query: 478 EQAEALRQVWQGQKAAADALLAARAARKKARDEGASEEELARLVQEIEAASDAFKTAQGK 537 + E LR WQ + AA AL+ AR ++ G EE I+A S ++ A+ Sbjct: 481 SETELLRADWQNELEAARALVTARTTLNQSL--GEEEEPAELRENFIKA-SRTYEAARVG 537 Query: 538 EPLVRVDVDPDVVAKVISDWTGIPVGKMLRDQAATVMHMARTLSERVRGQDHAMHQIGEI 597 + LV ++V PDVVAKV+SDWTGIPVGK+ R+QAA + + + L R++GQD A++ + E Sbjct: 538 DGLVSIEVTPDVVAKVVSDWTGIPVGKVAREQAALAVDLEKQLGVRIKGQDAALYAVSEA 597 Query: 598 LKTAQSGLRDPQQPLGVFLLAGPSGVGKTETALSVADILFGDEKSTVIINMSEFQEKHNV 657 +K +++GLR P+QP GVFLL GPSGVGKTET L++ADILFGDEKS V +NMSEFQEKH V Sbjct: 598 IKASKAGLRGPEQPGGVFLLVGPSGVGKTETGLALADILFGDEKSVVTVNMSEFQEKHTV 657 Query: 658 SRLIGSPPGYVGYGEGGVLTEAVRQRPYSVVLLDEVEKAHLDVMNLFYQVFDKGMLSDGE 717 SRLIGSPPGYVGYGEGG+LTEAVRQRPYSVVLLDEVEKAHLDVMNLFYQVFDKGML+DGE Sbjct: 658 SRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKAHLDVMNLFYQVFDKGMLTDGE 717 Query: 718 GKEIDFSNTVIFLTSNLATDVITEMTAGDDRPDHDTLLSAVRPILSAHFKPALLARMTVI 777 GK I F NTVI LTSNLA+DVI EMT + ++LL AVRPILS HFKPALLARM+++ Sbjct: 718 GKLISFRNTVIMLTSNLASDVIQEMTKDGTAMELESLLGAVRPILSEHFKPALLARMSIV 777 Query: 778 PYFTLARDALAGIVRLKMNKIVSRLLHNNKMKFTYTDAVVEQIASRCTEVETGARNIDFI 837 P+ +L+ A+ GI LK++ + +RLL NNKM TYT V E IA+RCTEVETGARNI++I Sbjct: 778 PFQSLSPAAMQGIAALKLDTLAARLLANNKMTMTYTPQVAELIAARCTEVETGARNIEYI 837 Query: 838 LRGTVMPLMSQEILSRMSGEVQPAAITLDVAEDGTFKVDF 877 L GT++P MSQEIL+ MS P + L+V E+G+F +DF Sbjct: 838 LSGTILPRMSQEILAHMSDAGMPRRVNLEVNEEGSFAMDF 877 >gb|EES52234.1| ATPase AAA-2 domain protein [Leptospirillum ferrodiazotrophum] Length = 890 Score = 965 bits (2494), Expect = 0.0, Method: Composition-based stats. Identities = 505/872 (57%), Positives = 648/872 (74%), Gaps = 12/872 (1%) Query: 1 MLLVELKPLVGRLNGYSKQALEDGVGLCVSRGHYEITVEHLLVKLLDDLQSDIVLMLRQH 60 M++ +LKPL R++ +A+E G GLC+SR HYEIT EH+++ LLD SD++ +L Sbjct: 1 MIIADLKPLFRRMSPILTRAVEQGAGLCLSRSHYEITPEHVVISLLDHPDSDVMKILAAE 60 Query: 61 GVDAALVRRALEKSIEDMRTGNAGRPAFSPLLLELLQDAWLIASVNLFESRIRSGAILLA 120 G+D VRR + +++D+R+GN GRP FSPLL+E+LQDA LIAS+N E RSG L A Sbjct: 61 GIDGGSVRREMSNALDDLRSGNGGRPVFSPLLIEVLQDAHLIASINRNEPHTRSGVFLQA 120 Query: 121 FLARATYYATGDYATPLRALNRETLLASFGQICSASIEETAAAADAPGGGEAAGAPAGDG 180 F+ R + Y++G + L + +E L F + S S E GG E+ P+ +G Sbjct: 121 FVNRLSAYSSGRPSKSLERIGKERLKDQFDTLASGSAEAIG------GGQESQEGPSEEG 174 Query: 181 SAIARFCENFTDKARAGKIDPVFGRDMEIRQMVDILARRRKNNPICVGDPGVGKTAVVEG 240 +AI RFCE+FT+KAR GKIDPVFGRD E+RQ++DIL+RRRKNNPICVGDPGVGKTAVVE Sbjct: 175 TAIGRFCEDFTEKARKGKIDPVFGRDAEVRQIIDILSRRRKNNPICVGDPGVGKTAVVES 234 Query: 241 LALRIVTGDVPDSLKEVTILGLDMGLLQAGASVKGEFENRLKGVITEIKSSPKPIILFID 300 LALRIV GDVP+SL +V +LGLDMG L+AGA VKGEFENRLKGVI EIK+S P+ILFID Sbjct: 235 LALRIVEGDVPESLSKVRLLGLDMGALEAGAGVKGEFENRLKGVINEIKASSVPVILFID 294 Query: 301 EAHTLIGAGGQAGTSDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQLVKL 360 EAHTLIGAGG G DAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQ VKL Sbjct: 295 EAHTLIGAGGAQGGGDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQPVKL 354 Query: 361 DEPDLATAVLILRGLKEKYEDVHHVVMRDDAIIAAAELSSRYITGRQLPDKAVDLLDTAC 420 DEP + TA+LILRGLK YE VHHV +RDDA++AAA LS RY+TGR+LPDKAVDLLDT+ Sbjct: 355 DEPSVETAILILRGLKAHYEAVHHVTIRDDALVAAATLSDRYLTGRKLPDKAVDLLDTSA 414 Query: 421 ARVKVLQSAKPDVLEDKERLIQALQREKGGLERDRDNLQPVDLARLDDIDGLLATAEEQA 480 AR+++ QS+KP+ +E ER IQAL+REK GL RD+ Q + RLD I L T E++ Sbjct: 415 ARIRISQSSKPEKIEGLERRIQALEREKNGLVRDQTFGQDIPAERLDAIGRELGTLEQEL 474 Query: 481 EALRQVWQGQKAAADALLAARAARKKARDEGASEEELARLVQEIEAASDAFKTAQGKEPL 540 R+ W+ +K A LL A R+ R EG E ++E+ A + Q P+ Sbjct: 475 SRQRERWEKEKTAVAELL---AHREDPRREGPDRES---WMKELRTKEAAVRKIQEDHPM 528 Query: 541 VRVDVDPDVVAKVISDWTGIPVGKMLRDQAATVMHMARTLSERVRGQDHAMHQIGEILKT 600 + +VDP+ VA+V+S+WTGIP+GK+LR+QA TVM + TL ERV GQ+ A+ ++GEI++ Sbjct: 529 IHFEVDPETVARVVSNWTGIPLGKLLREQAQTVMRLQETLGERVLGQEPALARVGEIIRN 588 Query: 601 AQSGLRDPQQPLGVFLLAGPSGVGKTETALSVADILFGDEKSTVIINMSEFQEKHNVSRL 660 +++G + P QP+G+FLL GPSGVGKTETAL+VADILFGDEK+TV +NMSEFQEKH SRL Sbjct: 589 SRAGFKAPNQPVGIFLLVGPSGVGKTETALAVADILFGDEKATVTLNMSEFQEKHQASRL 648 Query: 661 IGSPPGYVGYGEGGVLTEAVRQRPYSVVLLDEVEKAHLDVMNLFYQVFDKGMLSDGEGKE 720 IGSPPGYVGYGEGG+LTEAVRQRPYSVVLLDEVEKAH D++N+FYQVFDKG+LSDGEGKE Sbjct: 649 IGSPPGYVGYGEGGLLTEAVRQRPYSVVLLDEVEKAHPDILNMFYQVFDKGVLSDGEGKE 708 Query: 721 IDFSNTVIFLTSNLATDVITEMTAGDDRPDHDTLLSAVRPILSAHFKPALLARMTVIPYF 780 IDFSNTVIFLTSNLA++ ++ ++ L++ +RP LS HFKPALLARMT++PY Sbjct: 709 IDFSNTVIFLTSNLASEKLSAYALEHPEASYEDLVTLIRPDLSRHFKPALLARMTIVPYL 768 Query: 781 TLARDALAGIVRLKMNKIVSRLLHNNKMKFTYTDAVVEQIASRCTEVETGARNIDFILRG 840 L +AL IVRLK ++ + NN ++ + D++++ +A +C E GARNID++L+ Sbjct: 769 PLRGEALGRIVRLKTKRLSRSFVQNNGVEIVFEDSLIDHVALQCETSEAGARNIDYLLQS 828 Query: 841 TVMPLMSQEILSRMSGEVQPAAITLDVAEDGT 872 ++P +S+E++ R+ + + +A DGT Sbjct: 829 RILPEISRELIGRLVEGTLDGPVRVGIAPDGT 860 >ref|YP_439061.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia thailandensis E264] ref|ZP_05590431.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia thailandensis E264] gb|ABC35698.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia thailandensis E264] Length = 958 Score = 926 bits (2392), Expect = 0.0, Method: Composition-based stats. Identities = 538/911 (59%), Positives = 660/911 (72%), Gaps = 32/911 (3%) Query: 1 MLLVELKPLVGRLNGYSKQALEDGVGLCVSRGHYEITVEHLLVKLLDDLQSDIVLMLRQH 60 MLLV+LKPL+ RLN Y + ALE+ VG CV+R H ++ VEHLL +L D+ +D+ L+LR Sbjct: 1 MLLVDLKPLIERLNPYCRTALENAVGACVARRHDDVAVEHLLARLCDEPSADVALLLRAS 60 Query: 61 GVDAALVRRALEKSIEDMRTGNAGRPAFSPLLLELLQDAWLIASVNLFESRIRSGAILLA 120 G DAA +RR + +++ G GRPAF+P LL LLQDAWLIAS+ L E++IRS A+L A Sbjct: 61 GADAARLRRQADAALDARPAGGGGRPAFAPSLLALLQDAWLIASLELGETQIRSAAVLAA 120 Query: 121 FLARATYYATGDYATPLRALNRETLLASFGQICSASIEETAAAADAPGGGEAAGAPAGD- 179 +ARA + L++L R+ L+A F C+ SIE A G+A P Sbjct: 121 AVARAARQPSRGGDDMLQSLRRDALVARFAHACAQSIESRGPGARDAAPGDANDTPGAHD 180 Query: 180 -GSAIARFCENFTDKARAGKIDPVFGRDMEIRQMVDILARRRKNNPICVGDPGVGKTAVV 238 SAIAR+CE+FT KARAG+IDPVFGRD +IRQ+VDILARRRKNNP+CVG+PGVGKTAVV Sbjct: 181 ASSAIARYCEDFTAKARAGRIDPVFGRDAQIRQIVDILARRRKNNPVCVGEPGVGKTAVV 240 Query: 239 EGLALRIVTGDVPDSLKEVTILGLDMGLLQAGASVKGEFENRLKGVITEIKSSPKPIILF 298 EGLALRI GDVP +L+ T+LGLD+GLLQAGASVKGEFE RLK VI EI +S P++LF Sbjct: 241 EGLALRIAEGDVPAALRHATLLGLDLGLLQAGASVKGEFEQRLKRVIAEIHASQAPVVLF 300 Query: 299 IDEAHTLIGAGGQAGTSDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQLV 358 +DEAHTLIGAGG AG SDAANLLKPALARGELRTIAATTW+EYKKYFEKDAALARRFQ V Sbjct: 301 VDEAHTLIGAGGPAGASDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQPV 360 Query: 359 KLDEPDLATAVLILRGLKEKYEDVHHVVMRDDAIIAAAELSSRYITGRQLPDKAVDLLDT 418 KLD PD+AT+V+ILRGLKE+Y+D H V +RDDA++AAAELS RYITGRQLPDKA+DLLDT Sbjct: 361 KLDSPDVATSVMILRGLKERYQDAHGVTIRDDALVAAAELSERYITGRQLPDKAIDLLDT 420 Query: 419 ACARVKVLQSAKPDVLEDKERLIQALQREKGGLERDRDNLQPVDLARLDDIDGLLATAEE 478 ACARVKV Q KP LED ER IQAL+RE+ L RD D R+ DID LA Sbjct: 421 ACARVKVRQQTKPAALEDAERAIQALERERRALRRDLAERCAPDTPRVADIDRELAALSA 480 Query: 479 QAEALRQVWQGQKAAADALLAARAARKKARDEG--------------------------- 511 +A+AL + W Q+ AA AL+ AR A + D Sbjct: 481 RADALSEAWAAQRDAAQALVEARRACRAIADAAEAAETASASGVAGVAGVAAAADVAPGA 540 Query: 512 -ASEEELARLVQEIEAASDAFKTAQGKEPLVRVDVDPDVVAKVISDWTGIPVGKMLRDQA 570 AS + R + + A+ F+ A+ PLVR+DVDP+ +A V++DWTGI GK+ RD+A Sbjct: 541 EASADARERAARALADATHRFEHARRDAPLVRIDVDPEAIADVVADWTGIAAGKLRRDRA 600 Query: 571 ATVMHMARTLSERVRGQDHAMHQIGEILKTAQSGLRDPQQPLGVFLLAGPSGVGKTETAL 630 ++ +A TL R+RGQDHA+ QI E +K +G+ DP++PLGVFLLAGPSG GKTETAL Sbjct: 601 NVMLRLADTLKGRIRGQDHAIEQISEAVKAGAAGVHDPRRPLGVFLLAGPSGTGKTETAL 660 Query: 631 SVADILFGDEKSTVIINMSEFQEKHNVSRLIGSPPGYVGYGEGGVLTEAVRQRPYSVVLL 690 +VAD LFGDE+S V++NMSEFQE+H+VSRLIGSPPGYVGYGEGG+LTEAVRQRPYSVVLL Sbjct: 661 AVADALFGDERSIVVVNMSEFQERHDVSRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVLL 720 Query: 691 DEVEKAHLDVMNLFYQVFDKGMLSDGEGKEIDFSNTVIFLTSNLATDVITEMTAGDDRPD 750 DEVEKAH DV+NLFYQVFDKG L DGEGKE+DF+NTVIFLTSNL DVI ++ A RPD Sbjct: 721 DEVEKAHPDVLNLFYQVFDKGSLCDGEGKEVDFANTVIFLTSNLGADVIADLAARGGRPD 780 Query: 751 HDTLLSAVRPILSAHFKPALLARMTVIPYFTLARDALAGIVRLKMNKIVSRLLHNNKMKF 810 D + +A+RP LS HFKPALLARMT IPY TLA D LA I R K+ +I +R+ + + Sbjct: 781 PDAMRAAIRPALSRHFKPALLARMTEIPYATLAPDTLADIARRKLERIAARVAAQHATRV 840 Query: 811 TYTDAVVEQIASRCTEVETGARNIDFILRGTVMPLMSQEILSRMSGEVQPAAITLDVAED 870 Y +AVV +A+RCTEVE+GAR++DFIL+ V+P ++Q +L AAI + + + Sbjct: 841 VYDEAVVAHVAARCTEVESGARSVDFILQRHVLPALAQHVLVCAGDATPMAAIRIAIDAN 900 Query: 871 GTFKV--DFPA 879 G F V D PA Sbjct: 901 GRFVVSTDEPA 911