BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4609.p (375 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_439062.1| hypothetical protein BTH_II0865 [Burkholderia t... 274 1e-71 ref|ZP_05590432.1| hypothetical protein BthaA_23576 [Burkholderi... 268 9e-70 ref|ZP_02360375.1| hypothetical protein BoklE_33202 [Burkholderi... 253 5e-65 ref|YP_001076063.1| hypothetical protein BURPS1106A_A2030 [Burkh... 248 1e-63 ref|ZP_01768871.1| conserved hypothetical protein [Burkholderia ... 247 2e-63 >ref|YP_439062.1| hypothetical protein BTH_II0865 [Burkholderia thailandensis E264] gb|ABC35006.1| Protein of unknown function (DUF1305) superfamily [Burkholderia thailandensis E264] Length = 351 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 153/323 (47%), Positives = 208/323 (64%), Gaps = 10/323 (3%) Query: 48 MAGATGTTSPSVKDDLLARGERYSYFQAIRLLRLFEKN---------TGAARPENLRIRP 98 MA A G P+++ LL + ++YFQAIRLLR + + A P + RP Sbjct: 1 MAAADGGAMPALEPVLLGEAKHFAYFQAIRLLRRIVRERREHHAGAASAPAAPMPIHTRP 60 Query: 99 KLSLNFPDNDVDSIEARPQGGYRITANFFGLYGVASPLPTYYTEDLFDEEREGGHAQREF 158 L+L+FPD DV+ I+ GGYR+ ANFFGLYGV+SPLPT+YTEDL DE +G HA R F Sbjct: 61 NLALSFPDTDVERIDKADDGGYRVVANFFGLYGVSSPLPTFYTEDLIDEAFKGRHAARGF 120 Query: 159 IDIVHYALYPLLFEAWSKYRLEQRVVEDGDAAALGHMFSFVGLDEEQLRVGLLPGSAGLL 218 +D++H ALYPLLF+AW K+RL R+VE+ DA AL +++ G+D R LP A LL Sbjct: 121 LDVLHRALYPLLFDAWLKHRLSLRIVEERDAHALRPLYALAGVDARIARDAGLPEHA-LL 179 Query: 219 RYAGLLNQRPRSALGLRTMLADAFPGASVEIDSCVLRVMAIPPDQQWSLGRQGTSLGEEA 278 R+ GLL+QRPRSA GLR +LADAF A+V+I+ CV + + IP DQ+ +G + LG +A Sbjct: 180 RHVGLLSQRPRSASGLRALLADAFAPAAVDIEPCVPQWLPIPDDQRTRVGARAHRLGVDA 239 Query: 279 YLGSTIDDYGSTLRLRLSELPEALFRQLLPGAAGHQRLRFLTRFYLIDPLEVEVVLDLRS 338 +G+ + D G+ LR+ L ++P LFR L+PG +RLRFL R YL P V+V + +R+ Sbjct: 240 RVGARMRDDGARLRIVLRDVPGPLFRALMPGGDAFRRLRFLVRLYLTQPFTVDVAIRVRA 299 Query: 339 EEAQGMRCNSQQWSRLGQDTWLA 361 +A RC WSR+G D WL Sbjct: 300 RDALPARCGGGAWSRVGLDAWLG 322 >ref|ZP_05590432.1| hypothetical protein BthaA_23576 [Burkholderia thailandensis E264] Length = 343 Score = 268 bits (686), Expect = 9e-70, Method: Composition-based stats. Identities = 149/314 (47%), Positives = 204/314 (64%), Gaps = 10/314 (3%) Query: 57 PSVKDDLLARGERYSYFQAIRLLRLFEKN---------TGAARPENLRIRPKLSLNFPDN 107 P+++ LL + ++YFQAIRLLR + + A P + RP L+L+FPD Sbjct: 2 PALEPVLLGEAKHFAYFQAIRLLRRIVRERREHHAGAASAPAAPMPIHTRPNLALSFPDT 61 Query: 108 DVDSIEARPQGGYRITANFFGLYGVASPLPTYYTEDLFDEEREGGHAQREFIDIVHYALY 167 DV+ I+ GGYR+ ANFFGLYGV+SPLPT+YTEDL DE +G HA R F+D++H ALY Sbjct: 62 DVERIDKADDGGYRVVANFFGLYGVSSPLPTFYTEDLIDEAFKGRHAARGFLDVLHRALY 121 Query: 168 PLLFEAWSKYRLEQRVVEDGDAAALGHMFSFVGLDEEQLRVGLLPGSAGLLRYAGLLNQR 227 PLLF+AW K+RL R+VE+ DA AL +++ G+D R LP A LLR+ GLL+QR Sbjct: 122 PLLFDAWLKHRLSLRIVEERDAHALRPLYALAGVDARIARDAGLPEHA-LLRHVGLLSQR 180 Query: 228 PRSALGLRTMLADAFPGASVEIDSCVLRVMAIPPDQQWSLGRQGTSLGEEAYLGSTIDDY 287 PRSA GLR +LADAF A+V+I+ CV + + IP DQ+ +G + LG +A +G+ + D Sbjct: 181 PRSASGLRALLADAFAPAAVDIEPCVPQWLPIPDDQRTRVGARAHRLGVDARVGARMRDD 240 Query: 288 GSTLRLRLSELPEALFRQLLPGAAGHQRLRFLTRFYLIDPLEVEVVLDLRSEEAQGMRCN 347 G+ LR+ L ++P LFR L+PG +RLRFL R YL P V+V + +R+ +A RC Sbjct: 241 GARLRIVLRDVPGPLFRALMPGGDAFRRLRFLVRLYLTQPFTVDVAIRVRARDALPARCG 300 Query: 348 SQQWSRLGQDTWLA 361 WSR+G D WL Sbjct: 301 GGAWSRVGLDAWLG 314 >ref|ZP_02360375.1| hypothetical protein BoklE_33202 [Burkholderia oklahomensis EO147] ref|ZP_02366149.1| hypothetical protein BoklC_25798 [Burkholderia oklahomensis C6786] Length = 339 Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats. Identities = 152/325 (46%), Positives = 207/325 (63%), Gaps = 7/325 (2%) Query: 57 PSVKDDLLARGERYSYFQAIRLLRLFEKN------TGAARPENLRIRPKLSLNFPDNDVD 110 P+++ LL + ++YFQAIRLLR + G A P + RP L+L+FPD DV+ Sbjct: 2 PALEPVLLGEAKHFAYFQAIRLLRRIVRERRGDAADGPAAPMPIHTRPNLTLSFPDTDVE 61 Query: 111 SIEARPQGGYRITANFFGLYGVASPLPTYYTEDLFDEEREGGHAQREFIDIVHYALYPLL 170 I+ GGYR+ ANFFGLYGV+SPLPT+YTEDL DE +G HA R F+D++H LYPLL Sbjct: 62 RIDKAEDGGYRVIANFFGLYGVSSPLPTFYTEDLIDETSKGRHAARGFLDVLHRVLYPLL 121 Query: 171 FEAWSKYRLEQRVVEDGDAAALGHMFSFVGLDEEQLRVGLLPGSAGLLRYAGLLNQRPRS 230 F+AW KYRL R+VE+ DAAAL +++ G+D R L A LLR+ GLL+QRPRS Sbjct: 122 FDAWLKYRLSLRIVEEHDAAALRPLYALAGVDVRTARDAGLHEHA-LLRHVGLLSQRPRS 180 Query: 231 ALGLRTMLADAFPGASVEIDSCVLRVMAIPPDQQWSLGRQGTSLGEEAYLGSTIDDYGST 290 A GLR +LADA ++V+I+ CV + + IP DQ+ +G + LG +A +G + D G Sbjct: 181 ASGLRALLADALAPSTVDIEQCVPQWLPIPDDQRTRVGARAHRLGVDARVGERMRDDGGR 240 Query: 291 LRLRLSELPEALFRQLLPGAAGHQRLRFLTRFYLIDPLEVEVVLDLRSEEAQGMRCNSQQ 350 LR+ L ++P LFR+L+PG +RLRFLTR YL P V+V + +R +A RC Sbjct: 241 LRIMLGDVPGPLFRELMPGGDAFRRLRFLTRLYLTQPFVVDVAVRVRVRDAGPARCGDDA 300 Query: 351 WSRLGQDTWLAPGHGGASTTVKFML 375 WSR+G D WL +T+ +F L Sbjct: 301 WSRVGLDAWLGGPSAERATSPEFRL 325 >ref|YP_001076063.1| hypothetical protein BURPS1106A_A2030 [Burkholderia pseudomallei 1106a] gb|ABN95766.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a] Length = 348 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 156/334 (46%), Positives = 211/334 (63%), Gaps = 7/334 (2%) Query: 48 MAGATGTTSPSVKDDLLARGERYSYFQAIRLLRLF---EKNTGAARPEN---LRIRPKLS 101 MA A G P+++ LL + ++YFQAIRLLR + A RP+ + RP LS Sbjct: 1 MAAANGGAMPALEPVLLGEAKHFAYFQAIRLLRRIARERRGDAAGRPDAPLPIHTRPNLS 60 Query: 102 LNFPDNDVDSIEARPQGGYRITANFFGLYGVASPLPTYYTEDLFDEEREGGHAQREFIDI 161 L+FPD DV+ I+ GGYR+ ANFFGLYGV+SPLPT+YTEDL DE G HA R F+D+ Sbjct: 61 LSFPDTDVERIDKADDGGYRVVANFFGLYGVSSPLPTFYTEDLIDEAFRGRHAARGFLDV 120 Query: 162 VHYALYPLLFEAWSKYRLEQRVVEDGDAAALGHMFSFVGLDEEQLRVGLLPGSAGLLRYA 221 +H ALYPLLF+AW K+RL R+VE+ D AL +++ G+D R L A LLRY Sbjct: 121 LHRALYPLLFDAWLKHRLALRIVEERDEHALRPLYALAGVDARIARDAGLHEHA-LLRYV 179 Query: 222 GLLNQRPRSALGLRTMLADAFPGASVEIDSCVLRVMAIPPDQQWSLGRQGTSLGEEAYLG 281 GLL+QRPRSA GLR +LADAF A+V+I+ CV + + IP DQ+ +G + LG +A +G Sbjct: 180 GLLSQRPRSAAGLRALLADAFAPATVDIEPCVPQWLPIPDDQRTRVGTRARRLGADARVG 239 Query: 282 STIDDYGSTLRLRLSELPEALFRQLLPGAAGHQRLRFLTRFYLIDPLEVEVVLDLRSEEA 341 + + D G+ LR+ L ++P LFR L+PG RLR L R YL P V+VV+ +R+ +A Sbjct: 240 ARMRDDGARLRIVLGDVPGPLFRALMPGGDAFARLRLLVRLYLTQPFAVDVVVRVRARDA 299 Query: 342 QGMRCNSQQWSRLGQDTWLAPGHGGASTTVKFML 375 RC + WSR+G D WL + + +F L Sbjct: 300 APARCGRRAWSRVGLDAWLGGPSAERAASPEFRL 333 >ref|ZP_01768871.1| conserved hypothetical protein [Burkholderia pseudomallei 305] gb|EBA46782.1| conserved hypothetical protein [Burkholderia pseudomallei 305] Length = 348 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 156/334 (46%), Positives = 211/334 (63%), Gaps = 7/334 (2%) Query: 48 MAGATGTTSPSVKDDLLARGERYSYFQAIRLLRLF---EKNTGAARPEN---LRIRPKLS 101 MA A G P+++ LL + ++YFQAIRLLR + A RP+ + RP LS Sbjct: 1 MAAADGGAMPALEPVLLGEAKHFAYFQAIRLLRRIARERRGDAAGRPDAPLPIHTRPNLS 60 Query: 102 LNFPDNDVDSIEARPQGGYRITANFFGLYGVASPLPTYYTEDLFDEEREGGHAQREFIDI 161 L+FPD DV+ I+ GGYR+ ANFFGLYGV+SPLPT+YTEDL DE G HA R F+D+ Sbjct: 61 LSFPDTDVERIDKADDGGYRVVANFFGLYGVSSPLPTFYTEDLIDEAFRGRHAARGFLDV 120 Query: 162 VHYALYPLLFEAWSKYRLEQRVVEDGDAAALGHMFSFVGLDEEQLRVGLLPGSAGLLRYA 221 +H ALYPLLF+AW K+RL R+VE+ D AL +++ G+D R L A LLRY Sbjct: 121 LHRALYPLLFDAWLKHRLALRIVEERDEHALRPLYALAGVDARIARDAGLHEHA-LLRYV 179 Query: 222 GLLNQRPRSALGLRTMLADAFPGASVEIDSCVLRVMAIPPDQQWSLGRQGTSLGEEAYLG 281 GLL+QRPRSA GLR +LADAF A+V+I+ CV + + IP DQ+ +G + LG +A +G Sbjct: 180 GLLSQRPRSAAGLRALLADAFAPATVDIEPCVPQWLPIPDDQRTRVGARAHRLGADARVG 239 Query: 282 STIDDYGSTLRLRLSELPEALFRQLLPGAAGHQRLRFLTRFYLIDPLEVEVVLDLRSEEA 341 + + D G+ LR+ L ++P LFR L+PG RLR L R YL P V+VV+ +R+ +A Sbjct: 240 ARMRDDGARLRIVLGDVPGPLFRALMPGGDAFARLRLLVRLYLTQPFAVDVVVRVRARDA 299 Query: 342 QGMRCNSQQWSRLGQDTWLAPGHGGASTTVKFML 375 RC + WSR+G D WL + + +F L Sbjct: 300 APARCGGRVWSRVGLDAWLGGPSAERAASPEFRL 333