BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4607.p (290 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777070.1| ADP-heptose synthase [Herbaspirillum seroped... 489 e-136 ref|YP_004754390.1| ADP-heptose synthase/ D-glycero-beta-D-manno... 415 e-114 ref|ZP_04579629.1| ADP-heptose synthase [Oxalobacter formigenes ... 371 e-101 ref|YP_002980828.1| bifunctional protein RfaE [Ralstonia pickett... 360 1e-97 ref|ZP_07675788.1| RfaE protein [Ralstonia sp. 5_7_47FAA] >gi|30... 360 1e-97 >ref|YP_003777070.1| ADP-heptose synthase [Herbaspirillum seropedicae SmR1] gb|ADJ65162.1| ADP-heptose synthase protein [Herbaspirillum seropedicae SmR1] Length = 310 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 272/288 (94%), Positives = 279/288 (96%) Query: 1 MLDRYWFGEVNRISPEAPVPVVRVERKEERLGGAANVARNTASLGAQTALLGVTGDDEPA 60 MLDRYWFGEVNRISPEAPVPVVRVERKEERLGGAANVARN ASLGAQTALLGVTGDDEPA Sbjct: 21 MLDRYWFGEVNRISPEAPVPVVRVERKEERLGGAANVARNIASLGAQTALLGVTGDDEPA 80 Query: 61 RVMESMLGEMGIRSHLNRDPGISTIVKLRVIGRQQQLVRIDFEEAPTDTVLRDKLTQFNS 120 RVM++ML EMGI SHLNRDP ISTIVKLRVIGRQQQLVRIDFEEAPTDTVLRDKLTQFN+ Sbjct: 81 RVMDAMLREMGIASHLNRDPSISTIVKLRVIGRQQQLVRIDFEEAPTDTVLRDKLTQFNT 140 Query: 121 LVADYDVIIFSDYAKGGLVNVAEMIATASKLGKRILVDPKGDDFARYAGASVLTPNKSEL 180 LVADYDVI+FSDYAKG LVNVAEMIATA KLGKRILVDPKGDDF RY GAS+LTPNKSEL Sbjct: 141 LVADYDVILFSDYAKGSLVNVAEMIATARKLGKRILVDPKGDDFQRYVGASLLTPNKSEL 200 Query: 181 VRIVGQWKNEEDLTARAQKLRAELNLEALLLTRSEEGMSLYRDGEVTHFPTMAREVFDVS 240 VRIVGQWKNE+DLTARAQKLRAEL LEALLLTRSEEGMSLYRDGEVTHFPTMAREVFDVS Sbjct: 201 VRIVGQWKNEDDLTARAQKLRAELQLEALLLTRSEEGMSLYRDGEVTHFPTMAREVFDVS 260 Query: 241 GAGDTVIGTLAVMLGAGASLVDAVTMANRAGGIVVGKLGTATVTREEL 288 GAGDTVIGTLAVMLGAGASLV+AVTMANRAGGIVVGKLGTATVTREEL Sbjct: 261 GAGDTVIGTLAVMLGAGASLVEAVTMANRAGGIVVGKLGTATVTREEL 308 >ref|YP_004754390.1| ADP-heptose synthase/ D-glycero-beta-D-manno-heptose 7-phosphate kinase [Collimonas fungivorans Ter331] gb|AEK63567.1| ADP-heptose synthase/ D-glycero-beta-D-manno-heptose 7-phosphate kinase [Collimonas fungivorans Ter331] Length = 329 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 217/288 (75%), Positives = 243/288 (84%) Query: 1 MLDRYWFGEVNRISPEAPVPVVRVERKEERLGGAANVARNTASLGAQTALLGVTGDDEPA 60 MLDRYWFGEV+RISPEAPVPVVRVE++EERLGGAANVARN A+LG + LLGV G DE Sbjct: 40 MLDRYWFGEVSRISPEAPVPVVRVEKREERLGGAANVARNIATLGGSSGLLGVVGQDEAG 99 Query: 61 RVMESMLGEMGIRSHLNRDPGISTIVKLRVIGRQQQLVRIDFEEAPTDTVLRDKLTQFNS 120 ++ ML EMG+ S L RD ISTI+KLRVIGRQQQL+RIDFEEAPTD VLRDKLT+FN+ Sbjct: 100 DTVDGMLQEMGVNSFLTRDATISTIIKLRVIGRQQQLLRIDFEEAPTDAVLRDKLTRFNT 159 Query: 121 LVADYDVIIFSDYAKGGLVNVAEMIATASKLGKRILVDPKGDDFARYAGASVLTPNKSEL 180 L+ Y V++ SDYAKG LVNVAEMIA A GK ILVDPKGDDF+RYAGA+VLTPNKSE+ Sbjct: 160 LLPQYQVVVLSDYAKGSLVNVAEMIAAARLAGKCILVDPKGDDFSRYAGATVLTPNKSEM 219 Query: 181 VRIVGQWKNEEDLTARAQKLRAELNLEALLLTRSEEGMSLYRDGEVTHFPTMAREVFDVS 240 IVG WK EE+LT +AQKLR L LEALLLTRSEEGMSLY D E+ HFP MAREVFDVS Sbjct: 220 KHIVGSWKTEEELTLKAQKLRESLQLEALLLTRSEEGMSLYTDQEIRHFPAMAREVFDVS 279 Query: 241 GAGDTVIGTLAVMLGAGASLVDAVTMANRAGGIVVGKLGTATVTREEL 288 GAGDTVI TLA+MLGAG + DAV +ANRAGGIVVGKLGTATV+R+EL Sbjct: 280 GAGDTVIATLALMLGAGLPIADAVALANRAGGIVVGKLGTATVSRDEL 327 >ref|ZP_04579629.1| ADP-heptose synthase [Oxalobacter formigenes OXCC13] gb|EEO30602.1| ADP-heptose synthase [Oxalobacter formigenes OXCC13] Length = 311 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 192/288 (66%), Positives = 229/288 (79%) Query: 1 MLDRYWFGEVNRISPEAPVPVVRVERKEERLGGAANVARNTASLGAQTALLGVTGDDEPA 60 MLDRYWFGEVNRISPEAPVPVV +E+ EERLGGAANVARN ++LGA ++LG+ G DE Sbjct: 22 MLDRYWFGEVNRISPEAPVPVVLIEKSEERLGGAANVARNVSALGAGCSILGIVGRDEAG 81 Query: 61 RVMESMLGEMGIRSHLNRDPGISTIVKLRVIGRQQQLVRIDFEEAPTDTVLRDKLTQFNS 120 R +E+ML E GI L+ DP IST VKLRV+GRQQQL+R+DFE+ PT L +K Q+ + Sbjct: 82 RTVENMLNEGGITPFLHVDPHISTTVKLRVVGRQQQLLRLDFEKKPTQETLANKQVQYRT 141 Query: 121 LVADYDVIIFSDYAKGGLVNVAEMIATASKLGKRILVDPKGDDFARYAGASVLTPNKSEL 180 L+ +D+I+FSDY KG L NV+ MIA A + GK LVDPKG+DF Y GA++LTPNKSEL Sbjct: 142 LLDSHDIIVFSDYGKGALSNVSSMIAEAKQAGKTTLVDPKGEDFTIYTGATILTPNKSEL 201 Query: 181 VRIVGQWKNEEDLTARAQKLRAELNLEALLLTRSEEGMSLYRDGEVTHFPTMAREVFDVS 240 ++VG W NEE+LTA+AQKLR L L+ LLLTRSEEGMSL+ EV H PT+AREVFDVS Sbjct: 202 RQVVGGWNNEEELTAKAQKLRESLQLDYLLLTRSEEGMSLFGKDEVIHIPTVAREVFDVS 261 Query: 241 GAGDTVIGTLAVMLGAGASLVDAVTMANRAGGIVVGKLGTATVTREEL 288 GAGDTVI TLA MLG G ++ +AV +ANRAGGIVVGKLGTATVT EEL Sbjct: 262 GAGDTVIATLATMLGNGKTVAEAVDIANRAGGIVVGKLGTATVTSEEL 309 >ref|YP_002980828.1| bifunctional protein RfaE [Ralstonia pickettii 12D] gb|ACS62156.1| rfaE bifunctional protein [Ralstonia pickettii 12D] Length = 310 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 188/288 (65%), Positives = 237/288 (82%) Query: 1 MLDRYWFGEVNRISPEAPVPVVRVERKEERLGGAANVARNTASLGAQTALLGVTGDDEPA 60 MLDRYWFG+V RISPEAPVPVV+++R++ERLGGAANVARN A+LGAQ A+LGV GDDEP Sbjct: 21 MLDRYWFGDVERISPEAPVPVVQIKRQDERLGGAANVARNVAALGAQAAMLGVIGDDEPG 80 Query: 61 RVMESMLGEMGIRSHLNRDPGISTIVKLRVIGRQQQLVRIDFEEAPTDTVLRDKLTQFNS 120 R +E++LGE + HL+RDP ++T +KLRV+ RQQQL+R+DFE APT VL L +F++ Sbjct: 81 RSIETLLGESQVTGHLHRDPAVNTTIKLRVLARQQQLIRVDFENAPTHEVLMSVLDRFST 140 Query: 121 LVADYDVIIFSDYAKGGLVNVAEMIATASKLGKRILVDPKGDDFARYAGASVLTPNKSEL 180 LV +DV++ SDY KGGL +V +MI T+ + G+R+LVDPKGDD++RY GA+++TPN++E+ Sbjct: 141 LVPQHDVVVLSDYGKGGLTHVGKMIETSRQAGRRVLVDPKGDDYSRYKGATMITPNRAEM 200 Query: 181 VRIVGQWKNEEDLTARAQKLRAELNLEALLLTRSEEGMSLYRDGEVTHFPTMAREVFDVS 240 ++VG WK+E+DLT RAQ LR EL LEALLLTRSEEGM+LY + EV H AREVFDVS Sbjct: 201 RQVVGSWKSEQDLTIRAQNLRRELQLEALLLTRSEEGMTLYTEHEVLHVSAQAREVFDVS 260 Query: 241 GAGDTVIGTLAVMLGAGASLVDAVTMANRAGGIVVGKLGTATVTREEL 288 GAGDTVI TLA +LGAGA++ +AV ANRAGGIVVGKLGTA VT EL Sbjct: 261 GAGDTVIATLATLLGAGANIKEAVQYANRAGGIVVGKLGTAVVTHAEL 308 >ref|ZP_07675788.1| RfaE protein [Ralstonia sp. 5_7_47FAA] gb|EFP65775.1| RfaE protein [Ralstonia sp. 5_7_47FAA] Length = 310 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 187/288 (64%), Positives = 237/288 (82%) Query: 1 MLDRYWFGEVNRISPEAPVPVVRVERKEERLGGAANVARNTASLGAQTALLGVTGDDEPA 60 MLDRYWFG+V+RISPEAPVPVV+++R++ERLGGAANVARN A+LGAQ A+LGV GDDEP Sbjct: 21 MLDRYWFGDVDRISPEAPVPVVQIKRQDERLGGAANVARNVAALGAQAAMLGVIGDDEPG 80 Query: 61 RVMESMLGEMGIRSHLNRDPGISTIVKLRVIGRQQQLVRIDFEEAPTDTVLRDKLTQFNS 120 R +E++LGE + HL+RDP ++T +KLRV+ RQQQL+R+DFE APT VL L ++ + Sbjct: 81 RSIETLLGESHVTGHLHRDPAVNTTIKLRVLARQQQLIRVDFENAPTHEVLMSVLDRYGT 140 Query: 121 LVADYDVIIFSDYAKGGLVNVAEMIATASKLGKRILVDPKGDDFARYAGASVLTPNKSEL 180 LV +DV++ SDY KGGL +V +MI T+ + G+R+LVDPKGDD++RY GA+++TPN++E+ Sbjct: 141 LVPQHDVVVLSDYGKGGLTHVGKMIETSRQAGRRVLVDPKGDDYSRYKGATMITPNRAEM 200 Query: 181 VRIVGQWKNEEDLTARAQKLRAELNLEALLLTRSEEGMSLYRDGEVTHFPTMAREVFDVS 240 ++VG WK+E+DLT RAQ LR EL LEALLLTRSEEGM+LY + EV H AREVFDVS Sbjct: 201 RQVVGSWKSEQDLTIRAQNLRRELQLEALLLTRSEEGMTLYTEHEVLHVSAQAREVFDVS 260 Query: 241 GAGDTVIGTLAVMLGAGASLVDAVTMANRAGGIVVGKLGTATVTREEL 288 GAGDTVI TLA +LGAGA++ +AV ANRAGGIVVGKLGTA VT EL Sbjct: 261 GAGDTVIATLATLLGAGANIKEAVQYANRAGGIVVGKLGTAVVTHAEL 308