BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4598.p (415 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777063.1| acyl-CoA transferases/carnitine dehydratase ... 791 0.0 ref|YP_001099355.1| putative Formyl-CoA transferase [Herminiimon... 702 0.0 ref|ZP_08274879.1| CAIB/BAIF family protein [Oxalobacteraceae ba... 684 0.0 ref|NP_887987.1| hypothetical protein BB1441 [Bordetella bronchi... 625 e-177 ref|ZP_06689365.1| CAIB/BAIF family protein [Achromobacter piech... 624 e-177 >ref|YP_003777063.1| acyl-CoA transferases/carnitine dehydratase [Herbaspirillum seropedicae SmR1] gb|ADJ65155.1| acyl-CoA transferases/carnitine dehydratase protein [Herbaspirillum seropedicae SmR1] Length = 415 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 393/415 (94%), Positives = 406/415 (97%) Query: 1 MSTATSKPGPLAGIKVLELGTLIAGPFCSRMLAEFGAEVIKIEAPGDGDPLRHWRVLKDG 60 M+T TSKPGPLAGIKVLELGTLIAGPFCSRMLAEFGA+VIK+EAPG+GDPLR WRVLKDG Sbjct: 1 MTTGTSKPGPLAGIKVLELGTLIAGPFCSRMLAEFGADVIKVEAPGNGDPLRQWRVLKDG 60 Query: 61 TSLWWSVQARNKKSITLNMKDERAQQIARQLALDADVIIENYRPGVLEKWKLGYEDLKQL 120 TSLWWSVQARNKKSITLNMKDERAQ+IAR+LAL+ADVIIENYRPGVLEKWKLGYEDLKQL Sbjct: 61 TSLWWSVQARNKKSITLNMKDERAQEIARKLALEADVIIENYRPGVLEKWKLGYEDLKQL 120 Query: 121 NPATIMVRLSGYGQTGPLRDLPGFGAIGESMGGIRYVSGHPDRPPVRIGISIGDSIAALH 180 NPATIMVRLSGYGQTGPLRDLPGFGAIGESMGGIRYVSGHPDRPPVRIGISIGDSIAALH Sbjct: 121 NPATIMVRLSGYGQTGPLRDLPGFGAIGESMGGIRYVSGHPDRPPVRIGISIGDSIAALH 180 Query: 181 GVIGAMMALRHRDVSGGRWNGKSGADCVAGQGQMVDVALYEAVFNMMESMVPEFDFAGVV 240 GVIGAMMALRHRDV+GGRWNGK GADCVAGQGQMVDVALYEAVFNMMESMVPEFDFAGVV Sbjct: 181 GVIGAMMALRHRDVTGGRWNGKQGADCVAGQGQMVDVALYEAVFNMMESMVPEFDFAGVV 240 Query: 241 RERTGGALPGIVPSNTYTTGEGMNIVIAGNGDAIFKRLMSAIGRDDMANDPGLARNDGRV 300 RERTGGALPGIVPSNTYTTGEGMNIVIAGNGDAIFKRLMSAIGR+DMANDPGLARNDGRV Sbjct: 241 RERTGGALPGIVPSNTYTTGEGMNIVIAGNGDAIFKRLMSAIGREDMANDPGLARNDGRV 300 Query: 301 PRTEEIDAAIQQWCSTQTIDSALATLQAADVPVGKIYSVKDMMNDAQFLARDMFEQHQFA 360 PRTEEIDAAIQQWCSTQTI++ALATLQAADVPVGKIYSVKDMMNDAQFLARDMFEQHQFA Sbjct: 301 PRTEEIDAAIQQWCSTQTIETALATLQAADVPVGKIYSVKDMMNDAQFLARDMFEQHQFA 360 Query: 361 DGTPVKLPGITPKMSETPGQTRWLGPELGAHSDEILQSLGYDEAQIAQLRQDKVI 415 DGTPVKLPGITPKMSETPGQT+WLGPELGAHSDEILQSLGYDEA I LR V+ Sbjct: 361 DGTPVKLPGITPKMSETPGQTKWLGPELGAHSDEILQSLGYDEAHIKMLRDQGVV 415 >ref|YP_001099355.1| putative Formyl-CoA transferase [Herminiimonas arsenicoxydans] emb|CAL61228.1| putative CoA-transferase family III [Herminiimonas arsenicoxydans] Length = 414 Score = 702 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 342/413 (82%), Positives = 381/413 (92%) Query: 3 TATSKPGPLAGIKVLELGTLIAGPFCSRMLAEFGAEVIKIEAPGDGDPLRHWRVLKDGTS 62 T TS GPLAGIKVLELGTLIAGPFCSRMLAEFGA+VIKIE+P GDP+R WRVLKDGTS Sbjct: 2 TKTSSSGPLAGIKVLELGTLIAGPFCSRMLAEFGADVIKIESPDGGDPIRQWRVLKDGTS 61 Query: 63 LWWSVQARNKKSITLNMKDERAQQIARQLALDADVIIENYRPGVLEKWKLGYEDLKQLNP 122 LWWSVQARNKKS+TLN+KD R QQIA++LAL+AD+IIENYRPGVLEKW LGYE LK NP Sbjct: 62 LWWSVQARNKKSLTLNLKDPRGQQIAKKLALEADIIIENYRPGVLEKWSLGYEQLKAENP 121 Query: 123 ATIMVRLSGYGQTGPLRDLPGFGAIGESMGGIRYVSGHPDRPPVRIGISIGDSIAALHGV 182 ATIMVRLSG+GQTGPL+D PGFGAIGESMGG+RYVSG PDRPP+RIGISIGDS+AALHGV Sbjct: 122 ATIMVRLSGFGQTGPLKDQPGFGAIGESMGGMRYVSGFPDRPPLRIGISIGDSVAALHGV 181 Query: 183 IGAMMALRHRDVSGGRWNGKSGADCVAGQGQMVDVALYEAVFNMMESMVPEFDFAGVVRE 242 IGAMMALRHRD +GGRWNGKSGA+CVAGQGQM+DVALYEAVFNMMES+VPE+D+AGVVRE Sbjct: 182 IGAMMALRHRDATGGRWNGKSGAECVAGQGQMIDVALYEAVFNMMESLVPEYDYAGVVRE 241 Query: 243 RTGGALPGIVPSNTYTTGEGMNIVIAGNGDAIFKRLMSAIGRDDMANDPGLARNDGRVPR 302 RTGGALPGIVPSNTYTTG+G NIVIAGNGDAIFKRLM A+GRDD+AND LARNDGRVPR Sbjct: 242 RTGGALPGIVPSNTYTTGDGENIVIAGNGDAIFKRLMLAMGRDDLANDAQLARNDGRVPR 301 Query: 303 TEEIDAAIQQWCSTQTIDSALATLQAADVPVGKIYSVKDMMNDAQFLARDMFEQHQFADG 362 T EID AIQ WC+TQTIDSA+A LQAADVP GKIYSV+DMMND QFLAR MFEQH FADG Sbjct: 302 TAEIDGAIQAWCATQTIDSAMAILQAADVPAGKIYSVRDMMNDPQFLARKMFEQHTFADG 361 Query: 363 TPVKLPGITPKMSETPGQTRWLGPELGAHSDEILQSLGYDEAQIAQLRQDKVI 415 TP+KLP ITPK+SETPG+T+WLGP LG H+D++L++LGYD+A IA+LR+D V+ Sbjct: 362 TPIKLPAITPKLSETPGETKWLGPALGEHTDDVLKTLGYDDAGIAELRRDGVV 414 >ref|ZP_08274879.1| CAIB/BAIF family protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF31648.1| CAIB/BAIF family protein [Oxalobacteraceae bacterium IMCC9480] Length = 415 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 344/415 (82%), Positives = 372/415 (89%) Query: 1 MSTATSKPGPLAGIKVLELGTLIAGPFCSRMLAEFGAEVIKIEAPGDGDPLRHWRVLKDG 60 MS A G LAGIKVLELGTLIAGPFC+RML EFGA+VIKIEAP GDPLR WRVLKDG Sbjct: 1 MSAAKPAAGALAGIKVLELGTLIAGPFCARMLGEFGADVIKIEAPDGGDPLRQWRVLKDG 60 Query: 61 TSLWWSVQARNKKSITLNMKDERAQQIARQLALDADVIIENYRPGVLEKWKLGYEDLKQL 120 TSLWWSVQARNKKS+TLN+KD RAQ IAR+LALDAD+IIENYRPGVLEKW+LGYE LK + Sbjct: 61 TSLWWSVQARNKKSLTLNLKDPRAQDIARRLALDADIIIENYRPGVLEKWQLGYEQLKAI 120 Query: 121 NPATIMVRLSGYGQTGPLRDLPGFGAIGESMGGIRYVSGHPDRPPVRIGISIGDSIAALH 180 NPA IMVRLSGYGQTGP++DLPGFGAI ESMGG+RYVSGH DRPPVR+GISIGDS+AA+H Sbjct: 121 NPAAIMVRLSGYGQTGPMKDLPGFGAIAESMGGLRYVSGHADRPPVRVGISIGDSVAAMH 180 Query: 181 GVIGAMMALRHRDVSGGRWNGKSGADCVAGQGQMVDVALYEAVFNMMESMVPEFDFAGVV 240 GVIGAMMALRHRD SGGRWNGK+G DCVAGQGQMVDVALYE+VFN+MES+VPEFD AGVV Sbjct: 181 GVIGAMMALRHRDASGGRWNGKTGDDCVAGQGQMVDVALYESVFNLMESLVPEFDHAGVV 240 Query: 241 RERTGGALPGIVPSNTYTTGEGMNIVIAGNGDAIFKRLMSAIGRDDMANDPGLARNDGRV 300 RERTGGALPGIVPSNTYTTG+G NIVIAGNGDAIFKRLM AIGR DMA+DP LARNDGRV Sbjct: 241 RERTGGALPGIVPSNTYTTGDGDNIVIAGNGDAIFKRLMVAIGRSDMASDPQLARNDGRV 300 Query: 301 PRTEEIDAAIQQWCSTQTIDSALATLQAADVPVGKIYSVKDMMNDAQFLARDMFEQHQFA 360 PRT EID AIQ WCSTQTID ALATLQ ADVPV KIYSV+DM++D QFLAR MFEQH FA Sbjct: 301 PRTAEIDGAIQAWCSTQTIDVALATLQGADVPVSKIYSVRDMLHDPQFLARQMFEQHAFA 360 Query: 361 DGTPVKLPGITPKMSETPGQTRWLGPELGAHSDEILQSLGYDEAQIAQLRQDKVI 415 DGTPVKLP I+PK+S TPGQTRWLGP LGAH+ E+L LG+D A IAQLR D VI Sbjct: 361 DGTPVKLPAISPKLSATPGQTRWLGPALGAHNAEVLGDLGFDAAAIAQLRDDGVI 415 >ref|NP_887987.1| hypothetical protein BB1441 [Bordetella bronchiseptica RB50] emb|CAE31939.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 416 Score = 625 bits (1611), Expect = e-177, Method: Composition-based stats. Identities = 311/411 (75%), Positives = 350/411 (85%), Gaps = 6/411 (1%) Query: 11 LAGIKVLELGTLIAGPFCSRMLAEFGAEVIKIEAP------GDGDPLRHWRVLKDGTSLW 64 L G+KVLELGTLIAGPF +RM EFGAEVIK+E P G GDP+R WR L G SLW Sbjct: 4 LKGLKVLELGTLIAGPFAARMFGEFGAEVIKVETPHGPDGTGGGDPIRSWRHLHRGDSLW 63 Query: 65 WSVQARNKKSITLNMKDERAQQIARQLALDADVIIENYRPGVLEKWKLGYEDLKQLNPAT 124 W+VQARNK+SI LN+KD RAQ+IAR+LAL+ADV++ENYRPGVLEKW LGYE L+ +NPAT Sbjct: 64 WTVQARNKQSIALNLKDPRAQEIARRLALEADVVVENYRPGVLEKWGLGYEQLRAINPAT 123 Query: 125 IMVRLSGYGQTGPLRDLPGFGAIGESMGGIRYVSGHPDRPPVRIGISIGDSIAALHGVIG 184 IMVRLSGYGQTGPLRDLPGFGAIGESMGG+RYVSGHPDRPPVR+GISIGDS+AALHGVIG Sbjct: 124 IMVRLSGYGQTGPLRDLPGFGAIGESMGGLRYVSGHPDRPPVRVGISIGDSLAALHGVIG 183 Query: 185 AMMALRHRDVSGGRWNGKSGADCVAGQGQMVDVALYEAVFNMMESMVPEFDFAGVVRERT 244 A+MALRHRD +GGRWNG +G C AGQGQMVDVALYE+VFNMMES+VPE+D AGVVRERT Sbjct: 184 ALMALRHRDATGGRWNGATGEQCQAGQGQMVDVALYESVFNMMESLVPEYDVAGVVRERT 243 Query: 245 GGALPGIVPSNTYTTGEGMNIVIAGNGDAIFKRLMSAIGRDDMANDPGLARNDGRVPRTE 304 GGALPGIVPSNTYTT +G NIVIAGNGDAIF RLM AIGR D+A+DP L RNDGR R Sbjct: 244 GGALPGIVPSNTYTTRDGQNIVIAGNGDAIFHRLMLAIGRSDLAHDPQLERNDGRARRAT 303 Query: 305 EIDAAIQQWCSTQTIDSALATLQAADVPVGKIYSVKDMMNDAQFLARDMFEQHQFADGTP 364 EID+AIQ+WC T TI+ ALATL+AADVPVGKIYSV DM D QFLAR M EQH F DG+P Sbjct: 304 EIDSAIQRWCDTHTIEQALATLRAADVPVGKIYSVADMFTDPQFLARGMIEQHHFPDGSP 363 Query: 365 VKLPGITPKMSETPGQTRWLGPELGAHSDEILQSLGYDEAQIAQLRQDKVI 415 VKLP + PK+SETPG TRWLGP LG H++E+L++LGYD A IA+L Q I Sbjct: 364 VKLPAVVPKLSETPGGTRWLGPRLGEHTEEVLKALGYDAAAIAELAQTGAI 414 >ref|ZP_06689365.1| CAIB/BAIF family protein [Achromobacter piechaudii ATCC 43553] gb|EFF73755.1| CAIB/BAIF family protein [Achromobacter piechaudii ATCC 43553] Length = 419 Score = 624 bits (1610), Expect = e-177, Method: Composition-based stats. Identities = 310/411 (75%), Positives = 352/411 (85%), Gaps = 6/411 (1%) Query: 11 LAGIKVLELGTLIAGPFCSRMLAEFGAEVIKIEAP------GDGDPLRHWRVLKDGTSLW 64 L G+KVLELGTLIAGPF +R+ EFGA+VIK+E P G GDP+R WR L +G SLW Sbjct: 4 LTGLKVLELGTLIAGPFAARIFGEFGADVIKVETPHGPDGTGGGDPIRSWRHLHEGNSLW 63 Query: 65 WSVQARNKKSITLNMKDERAQQIARQLALDADVIIENYRPGVLEKWKLGYEDLKQLNPAT 124 W+VQARNK+SI LN+KD RAQ+IAR+LALDADV++ENYRPGVLEKW LGYE L+ +NPA Sbjct: 64 WTVQARNKQSIALNLKDPRAQEIARKLALDADVVVENYRPGVLEKWGLGYEQLRAINPAL 123 Query: 125 IMVRLSGYGQTGPLRDLPGFGAIGESMGGIRYVSGHPDRPPVRIGISIGDSIAALHGVIG 184 IMVRLSGYGQTGP++D PGFGAIGESMGG+RYVSGHPDRPPVR+GISIGDSIAALHGVIG Sbjct: 124 IMVRLSGYGQTGPMKDQPGFGAIGESMGGLRYVSGHPDRPPVRVGISIGDSIAALHGVIG 183 Query: 185 AMMALRHRDVSGGRWNGKSGADCVAGQGQMVDVALYEAVFNMMESMVPEFDFAGVVRERT 244 AMMALRHRD +GGRWNGK+G C AGQGQMVDVALYEAVFNMMES+VPE+D AGVVRERT Sbjct: 184 AMMALRHRDATGGRWNGKTGEACQAGQGQMVDVALYEAVFNMMESLVPEYDVAGVVRERT 243 Query: 245 GGALPGIVPSNTYTTGEGMNIVIAGNGDAIFKRLMSAIGRDDMANDPGLARNDGRVPRTE 304 GGALPGIVPSNTYTT +G NIVIAGNGDAIF RLM AIGRDD+A DP L RNDGR R + Sbjct: 244 GGALPGIVPSNTYTTRDGQNIVIAGNGDAIFHRLMRAIGRDDLAEDPELVRNDGRARRVQ 303 Query: 305 EIDAAIQQWCSTQTIDSALATLQAADVPVGKIYSVKDMMNDAQFLARDMFEQHQFADGTP 364 +ID AIQQWC +TID AL TL+AADVPVGKIYSV DM ND QFLAR M EQHQ ADG+P Sbjct: 304 DIDGAIQQWCDGRTIDQALDTLKAADVPVGKIYSVADMFNDPQFLARRMIEQHQLADGSP 363 Query: 365 VKLPGITPKMSETPGQTRWLGPELGAHSDEILQSLGYDEAQIAQLRQDKVI 415 VKLP + PK+SETPGQTRW+GP+LG H++E+L++LGYD A I +L + I Sbjct: 364 VKLPAVVPKLSETPGQTRWVGPKLGEHTEEVLKTLGYDSAAIDELAKTGAI 414