BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4586.p (580 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08638466.1| dihydroxy-acid dehydratase [Halomonas sp. TD0... 773 0.0 ref|YP_001339389.1| dihydroxy-acid dehydratase [Marinomonas sp. ... 750 0.0 ref|YP_002947553.1| Dihydroxy-acid dehydratase [Variovorax parad... 736 0.0 ref|ZP_07952485.1| dehydratase [Enterobacteriaceae bacterium 9_2... 725 0.0 ref|YP_001236726.1| dihydroxy-acid dehydratase [Bradyrhizobium s... 685 0.0 >ref|ZP_08638466.1| dihydroxy-acid dehydratase [Halomonas sp. TD01] gb|EGP18247.1| dihydroxy-acid dehydratase [Halomonas sp. TD01] Length = 576 Score = 773 bits (1995), Expect = 0.0, Method: Composition-based stats. Identities = 382/580 (65%), Positives = 452/580 (77%), Gaps = 4/580 (0%) Query: 1 MQEKRKQLADLRSQRWLAPDDMRSFAHRQRLQQMGLRREDFMTRPVIAVINTWSDLSPCH 60 M ++++ +LRSQRW DMR FAHRQR QQMGLRRE+FM +PV+ +INTWSDLSPCH Sbjct: 1 MNGTQRKIEELRSQRWYNSQDMRGFAHRQRTQQMGLRREEFMGKPVVGIINTWSDLSPCH 60 Query: 61 AHLRERAEVVKRGILMAGGLPVELPAMSLGEVMVKPTTMIYRNMLAMETEELLRSLPIDG 120 AHLR+RA+ VKR + GG PVELPA+SLGEV+VKPTTM+YRN LAME EELLRS PIDG Sbjct: 61 AHLRDRADAVKRAVWAGGGYPVELPALSLGEVLVKPTTMLYRNFLAMEAEELLRSHPIDG 120 Query: 121 AILMGGCDKTTPGLMMGALSADLPCLYVPAGPMLSDRYNGQVVGAGTHTRKFWDEYVAGN 180 +L+GGCDKTTP L+MGA+S D+P ++ PAGPML+ ++ G+ +GAGTHTRK+WDE +GN Sbjct: 121 VVLLGGCDKTTPALLMGAISMDIPAIFCPAGPMLNGKWKGKTLGAGTHTRKYWDELRSGN 180 Query: 181 IDKEEWIALESRMTRAPGTCNTMGTASTMTSIVEAMGFTLPGATSIPAMDAAHPRMCAAS 240 I +++W+ LESRMTR+ GTCNTMGTASTMTSIV+ MG TLPGA+SIPA DAAH RM ++ Sbjct: 181 ISQDDWVDLESRMTRSNGTCNTMGTASTMTSIVDTMGLTLPGASSIPASDAAHIRMASSC 240 Query: 241 GERIVAMVWEDLKPSCIFSRSAVDNGIIAYMALGGSTNAAIHTIAIAGRGGVELTLDDFV 300 G R++ M+WEDLKPS I +R NG YMALGGSTNAAIH IA+A R V+LTLDD Sbjct: 241 GSRVIEMIWEDLKPSDILTRDNFLNGAKCYMALGGSTNAAIHLIALARRANVKLTLDDLD 300 Query: 301 KVGAGIPVLADIFPSGTRLMEDFYYAGGLPALLDQLKPHLALDCLTVTGLSLGENLARCA 360 V IPVL +IFPSG LMEDFYYAGGLPALL QL HL L +V+G +L E+L Sbjct: 301 AVAREIPVLTNIFPSGQYLMEDFYYAGGLPALLIQLVDHLDLTTKSVSGRTLKEDL---- 356 Query: 361 ASARTANETAIRPLDQPVTEGAALAVLRGNLAPNGAVIKPSAASPHLLKHRGRALVFDSM 420 A N IRPLD PV EGAALAVLRGNLAP GAVIKPS+A P L+KHRGRA+VF++ Sbjct: 357 EGAECYNNDVIRPLDNPVCEGAALAVLRGNLAPRGAVIKPSSADPKLVKHRGRAIVFENH 416 Query: 421 AEMNASIHDPDLDVDADTVLVLRGGGPIGAPGMPEWGNLPIPKKLLAAGVRDMLRISDAR 480 A+M A I DP+LDV AD++LVLR GP GAPGMPEWG LPIPKKLLA GVRDM+R+SDAR Sbjct: 417 ADMVARIDDPELDVTADSILVLRQAGPRGAPGMPEWGALPIPKKLLAQGVRDMVRLSDAR 476 Query: 481 MSGTHYGTCVLHVSPESAVGGPLALIRTGDIIELDVAAGSINVLLSEQELAQRRGQWQAP 540 MSGTHYGTCVLH++PESAVGGPLAL+R GD IELDVAA + +L+ EL RR W+AP Sbjct: 477 MSGTHYGTCVLHIAPESAVGGPLALVRDGDEIELDVAARRLELLVDAAELDARRQCWRAP 536 Query: 541 PLPRQRGYIRLYVEHVSQADKGCDFDFLTGFETPVEPSIF 580 RGY L+ EHV+QAD GCDFD L G + EP IF Sbjct: 537 SPRIDRGYTALFQEHVTQADMGCDFDILQGGQRQGEPEIF 576 >ref|YP_001339389.1| dihydroxy-acid dehydratase [Marinomonas sp. MWYL1] gb|ABR69454.1| Dihydroxy-acid dehydratase [Marinomonas sp. MWYL1] Length = 573 Score = 750 bits (1936), Expect = 0.0, Method: Composition-based stats. Identities = 355/575 (61%), Positives = 441/575 (76%), Gaps = 4/575 (0%) Query: 6 KQLADLRSQRWLAPDDMRSFAHRQRLQQMGLRREDFMTRPVIAVINTWSDLSPCHAHLRE 65 K++ DLRSQRW APD+MR+FAHRQR QQ G +R DFM RPVI +INTWSD+S CH HLRE Sbjct: 3 KRIEDLRSQRWFAPDNMRAFAHRQRTQQTGYKRSDFMNRPVIGIINTWSDISTCHTHLRE 62 Query: 66 RAEVVKRGILMAGGLPVELPAMSLGEVMVKPTTMIYRNMLAMETEELLRSLPIDGAILMG 125 RA+ VK GI+ AGG P+E+PAMSLGEVMVKPTTM+YRN LAMETEELLRS PIDGAILMG Sbjct: 63 RAQFVKEGIIRAGGYPLEMPAMSLGEVMVKPTTMMYRNFLAMETEELLRSHPIDGAILMG 122 Query: 126 GCDKTTPGLMMGALSADLPCLYVPAGPMLSDRYNGQVVGAGTHTRKFWDEYVAGNIDKEE 185 GCDKTTPGL+MGA+S ++P +Y+PAG L+ + GQ +G GTHTRKFWDE AGN+ E+ Sbjct: 123 GCDKTTPGLLMGAISMNIPAIYIPAGASLNGNFKGQKIGTGTHTRKFWDEKRAGNLSDED 182 Query: 186 WIALESRMTRAPGTCNTMGTASTMTSIVEAMGFTLPGATSIPAMDAAHPRMCAASGERIV 245 W+ LE++MTR+ GTCNTMGTAS++TS+ E +GF LPG+ +IPA D+AH R+C+ +GERI Sbjct: 183 WLELEAKMTRSVGTCNTMGTASSLTSMAEVLGFCLPGSATIPAADSAHQRLCSLAGERIT 242 Query: 246 AMVWEDLKPSCIFSRSAVDNGIIAYMALGGSTNAAIHTIAIAGRGGVELTLDDFVKVGAG 305 MV+EDL P + ++ A +N I+ Y+ALGGSTN IH IA+AGR G++L + F + Sbjct: 243 KMVFEDLTPKSLATKEAFENAIVTYVALGGSTNGIIHLIAMAGRAGIDLPMSLFDEWARK 302 Query: 306 IPVLADIFPSGTRLMEDFYYAGGLPALLDQLKPHLALDCLTVTGLSLGENLARCAASART 365 +PV+A++ P+G LMED +YAGGLPALL +LK L LD V G +LGENL Sbjct: 303 VPVIANLMPAGEYLMEDLFYAGGLPALLTRLKDFLHLDQGNVNGRTLGENL----DGVEI 358 Query: 366 ANETAIRPLDQPVTEGAALAVLRGNLAPNGAVIKPSAASPHLLKHRGRALVFDSMAEMNA 425 NE IRPL+ PV + + V+ GNL P+GAV KPSAASPHLL HRG+ALVF++ A+M A Sbjct: 359 YNEDVIRPLNNPVNDRGTIGVITGNLCPDGAVCKPSAASPHLLNHRGKALVFENHAQMTA 418 Query: 426 SIHDPDLDVDADTVLVLRGGGPIGAPGMPEWGNLPIPKKLLAAGVRDMLRISDARMSGTH 485 I DPDLDVD +TVLVL+ GPIG PGMPEWG LPIPKKLL GVRDM+RISDARMSGTH Sbjct: 419 QIDDPDLDVDENTVLVLKNAGPIGGPGMPEWGGLPIPKKLLQKGVRDMVRISDARMSGTH 478 Query: 486 YGTCVLHVSPESAVGGPLALIRTGDIIELDVAAGSINVLLSEQELAQRRGQWQAPPLPRQ 545 YGTC+LHV+PES VGGPLA ++TGD I LDV ++N+ +S++E+A R+ W PP Sbjct: 479 YGTCILHVAPESYVGGPLAFVQTGDWIALDVEKRTLNLEISDEEMAARKAAWAPPPPKFA 538 Query: 546 RGYIRLYVEHVSQADKGCDFDFLTGFETPVEPSIF 580 RGY ++ HV+QA++GCDFDFL G EP IF Sbjct: 539 RGYGAMFSTHVTQANQGCDFDFLQGDAVIDEPEIF 573 >ref|YP_002947553.1| Dihydroxy-acid dehydratase [Variovorax paradoxus S110] gb|ACS22287.1| Dihydroxy-acid dehydratase [Variovorax paradoxus S110] Length = 587 Score = 736 bits (1900), Expect = 0.0, Method: Composition-based stats. Identities = 378/579 (65%), Positives = 456/579 (78%), Gaps = 4/579 (0%) Query: 6 KQLADLRSQRWLAPDDMRSFAHRQRLQQMGLRREDFMTRPVIAVINTWSDLSPCHAHLRE 65 K L +LRSQRW A DD+R FAHRQR+QQ GL RE+FM RPVI ++NTWS+LSPCHAHLRE Sbjct: 9 KTLQELRSQRWFASDDIRGFAHRQRMQQQGLAREEFMGRPVIGIVNTWSELSPCHAHLRE 68 Query: 66 RAEVVKRGILMAGGLPVELPAMSLGEVMVKPTTMIYRNMLAMETEELLRSLPIDGAILMG 125 RAE VKRG+L AGG P+ELPA+SLGEVMVKPTTMIYRN+LA+E EELLRSLPIDG +LMG Sbjct: 69 RAESVKRGVLQAGGYPLELPALSLGEVMVKPTTMIYRNLLAIECEELLRSLPIDGVVLMG 128 Query: 126 GCDKTTPGLMMGALSADLPCLYVPAGPMLSDRYNGQVVGAGTHTRKFWDEYVAGNIDKEE 185 GCDKTTPGL+MGALS D+P +++PAGPM++DRY GQ VGAGTHT+KFW E GNID+ E Sbjct: 129 GCDKTTPGLVMGALSMDIPAIFLPAGPMMNDRYKGQAVGAGTHTKKFWAERTIGNIDEAE 188 Query: 186 WIALESRMTRAPGTCNTMGTASTMTSIVEAMGFTLPGATSIPAMDAAHPRMCAASGERIV 245 WI LE+RMTR PGTCNTMGTASTMT+I EAMG +LPGA SIPA+D+ H RM GERIV Sbjct: 189 WIHLEARMTRTPGTCNTMGTASTMTAIAEAMGLSLPGAMSIPAVDSEHSRMAWRCGERIV 248 Query: 246 AMVWEDLKPSCIFSRSAVDNGIIAYMALGGSTNAAIHTIAIAGRGGVELTLDDFVKVGAG 305 +MVWEDLKPS I ++++ N + AYMALGGSTNAA+H A+AGR G+EL +D+ + Sbjct: 249 SMVWEDLKPSRIVTKASFLNAVAAYMALGGSTNAAVHLPAMAGRAGIELNIDELDAIARR 308 Query: 306 IPVLADIFPSGTRLMEDFYYAGGLPALLDQLKPHLALDCLTVTGLSLGENLARCAASART 365 +PV+A+++PSG +LMEDF+YAGGLPA+L+++ HL L TVTG +LGE++A A Sbjct: 309 VPVIANLYPSGEKLMEDFHYAGGLPAVLNRIAAHLDLSARTVTGRTLGEDIAGWPAEDDG 368 Query: 366 ANETAIRPLDQPVTE----GAALAVLRGNLAPNGAVIKPSAASPHLLKHRGRALVFDSMA 421 PL Q E G ALAVLRGNL P+GAVIKPSAA+P LL+H GRALVFDS A Sbjct: 369 TILDPASPLKQGTPECPEAGIALAVLRGNLCPDGAVIKPSAATPELLRHTGRALVFDSNA 428 Query: 422 EMNASIHDPDLDVDADTVLVLRGGGPIGAPGMPEWGNLPIPKKLLAAGVRDMLRISDARM 481 EM A++ D +LD DA TVLVLR GGP+G PGMPEWGNLPIPKKLL GVRDMLRISD+RM Sbjct: 429 EMLAAMADEELDCDASTVLVLRNGGPVGGPGMPEWGNLPIPKKLLRQGVRDMLRISDSRM 488 Query: 482 SGTHYGTCVLHVSPESAVGGPLALIRTGDIIELDVAAGSINVLLSEQELAQRRGQWQAPP 541 SGTHYGTCVLHVSPESA+GGPLAL++TGD I LD+ +++L+S++ELA+RR +W P Sbjct: 489 SGTHYGTCVLHVSPESAIGGPLALLKTGDTIRLDIGERRLDMLVSDEELAERRKEWTPPA 548 Query: 542 LPRQRGYIRLYVEHVSQADKGCDFDFLTGFETPVEPSIF 580 RGY +++ V+QA GCDF L G EP I+ Sbjct: 549 PAYARGYTKIFQHEVTQAHLGCDFASLAGNAPTPEPPIY 587 >ref|ZP_07952485.1| dehydratase [Enterobacteriaceae bacterium 9_2_54FAA] gb|EFV39185.1| dehydratase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 583 Score = 725 bits (1871), Expect = 0.0, Method: Composition-based stats. Identities = 353/580 (60%), Positives = 442/580 (76%), Gaps = 7/580 (1%) Query: 4 KRKQLADLRSQRWLAPDDMRSFAHRQRLQQMGLRREDFMTRPVIAVINTWSDLSPCHAHL 63 KR++++ LRSQRW AP+ +R+FAHRQR QQMG RRE+F+ +PVI +INTWSD+S CH HL Sbjct: 8 KRREISALRSQRWYAPNTIRAFAHRQRSQQMGYRREEFLGKPVIGIINTWSDMSTCHTHL 67 Query: 64 RERAEVVKRGILMAGGLPVELPAMSLGEVMVKPTTMIYRNMLAMETEELLRSLPIDGAIL 123 RERAE VKRGI AGG PVELPA+S+GEVMVKPTTM+YRN LAMETEELLR PIDG +L Sbjct: 68 RERAEAVKRGIWAAGGFPVELPALSMGEVMVKPTTMLYRNFLAMETEELLRQHPIDGVVL 127 Query: 124 MGGCDKTTPGLMMGALSADLPCLYVPAGPMLSDRYNGQVVGAGTHTRKFWDEYVAGNIDK 183 +GGCDK+TP L+MGA+S D+P ++ PAGPM S +++GQV GAGTHT+K+WD+ G I + Sbjct: 128 LGGCDKSTPALLMGAISMDIPAIFCPAGPMSSGKWHGQVTGAGTHTKKYWDQLRLGAITQ 187 Query: 184 EEWIALESRMTRAPGTCNTMGTASTMTSIVEAMGFTLPGATSIPAMDAAHPRMCAASGER 243 +WI LE MTR+ GTCNTMGTASTMTSI +AMGFTLPGA+SIPA D+ HP+M + GE Sbjct: 188 HDWIELEGAMTRSIGTCNTMGTASTMTSIADAMGFTLPGASSIPAADSRHPQMASLCGET 247 Query: 244 IVAMVWEDLKPSCIFSRSAVDNGIIAYMALGGSTNAAIHTIAIAGRGGVELTLDDFVKVG 303 IV MVW D KPS R NGI AY++LGGSTNAAIH IA+A R V+LTLDD ++ Sbjct: 248 IVDMVWYDHKPSNWLKRENFLNGIAAYLSLGGSTNAAIHLIAMANRAKVQLTLDDMAELA 307 Query: 304 AGIPVLADIFPSGTRLMEDFYYAGGLPALLDQLKPHLALDCLTVTGLSLGENLARCAASA 363 IPVLA++FPSG +LME+FY+AGGL A L ++ L + + VT + + L +A Sbjct: 308 RHIPVLANLFPSGEKLMEEFYFAGGLLAQLSKITDFLHQESVGVTNQPVSQWL----ENA 363 Query: 364 RTANETAIRPLDQPV---TEGAALAVLRGNLAPNGAVIKPSAASPHLLKHRGRALVFDSM 420 ++ IR LD P+ ++G AL VLRGNL PNGAV+K SAASP L HRG ALVFD+ Sbjct: 364 HCYDDDIIRNLDNPIVPLSQGCALTVLRGNLCPNGAVMKSSAASPALRHHRGPALVFDTH 423 Query: 421 AEMNASIHDPDLDVDADTVLVLRGGGPIGAPGMPEWGNLPIPKKLLAAGVRDMLRISDAR 480 +++ I DPDLDV D+V++LR GP+GAPGMPEWGNLPIPKKLL GV DM+RISD R Sbjct: 424 QQLSDCIDDPDLDVTKDSVIILRNAGPVGAPGMPEWGNLPIPKKLLQQGVTDMVRISDCR 483 Query: 481 MSGTHYGTCVLHVSPESAVGGPLALIRTGDIIELDVAAGSINVLLSEQELAQRRGQWQAP 540 MSGTHYGTC+LHV+PE+AVGGPLAL++TGD+IEL++ AG++N+L+ + LA+RR +Q Sbjct: 484 MSGTHYGTCILHVAPEAAVGGPLALVQTGDLIELNIDAGTLNMLVDDTTLARRRADFQPT 543 Query: 541 PLPRQRGYIRLYVEHVSQADKGCDFDFLTGFETPVEPSIF 580 QR + LY +HV+QAD+GCDFDFL EP IF Sbjct: 544 HRVFQRSWAALYQQHVTQADEGCDFDFLQAGSDVPEPPIF 583 >ref|YP_001236726.1| dihydroxy-acid dehydratase [Bradyrhizobium sp. BTAi1] gb|ABQ32820.1| dihydroxyacid dehydratase [Bradyrhizobium sp. BTAi1] Length = 578 Score = 685 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 343/581 (59%), Positives = 426/581 (73%), Gaps = 9/581 (1%) Query: 4 KRKQLADLRSQRWLAPDDMRSFAHRQRLQQMGLRREDFMTRPVIAVINTWSDLSPCHAHL 63 K+KQ LRS RW APDD+RSF HR R+ QMG +E++ RPVIA++NTWSD PCH H Sbjct: 3 KQKQPDQLRSARWFAPDDLRSFGHRSRVMQMGYAQEEWKGRPVIAIVNTWSDAQPCHMHF 62 Query: 64 RERAEVVKRGILMAGGLPVELPAMSLGEVMVKPTTMIYRNMLAMETEELLRSLPIDGAIL 123 ++R + VKRG+LMAGG P+ELPA+SL E ++KPTTM+YRNMLAM+ EELLRS P+DG +L Sbjct: 63 KQRVDDVKRGVLMAGGFPIELPALSLSESLLKPTTMLYRNMLAMDVEELLRSHPVDGVVL 122 Query: 124 MGGCDKTTPGLMMGALSADLPCLYVPAGPMLSDRYNGQVVGAGTHTRKFWDEYVAGNIDK 183 MGGCDKTTP L++GA S +LP +Y+PAGPML + G+ +G+G+ K+WDE AG + Sbjct: 123 MGGCDKTTPALLLGATSMNLPAIYLPAGPMLRGNWKGKTLGSGSDAWKYWDERRAGKLSD 182 Query: 184 EEWIALESRMTRAPGTCNTMGTASTMTSIVEAMGFTLPGATSIPAMDAAHPRMCAASGER 243 +W A+E+ + R+ GTC TMGTASTMT+I EA+G TLPGA+SIPA DA H RM + G R Sbjct: 183 ADWSAMEAGIARSHGTCMTMGTASTMTAIAEAIGMTLPGASSIPAADAEHIRMSSECGRR 242 Query: 244 IVAMVWEDLKPSCIFSRSAVDNGIIAYMALGGSTNAAIHTIAIAGRGGVELTLDDFVKVG 303 IV MVWEDL P+ I SR A +N I MA+G STNA IH IA A R G ++ LDDF Sbjct: 243 IVEMVWEDLTPAKIQSRQAFENAIAVAMAMGCSTNAIIHVIAQARRAGADIGLDDFEAAS 302 Query: 304 AGIPVLADIFPSG-TRLMEDFYYAGGLPALLDQLKPHLALDCLTVTGLSLGENLARCAAS 362 +PVLA++ PSG T LMEDFYYAGGLP L+ ++K HL L CLTV G +LG+N+ A Sbjct: 303 RKVPVLANVRPSGDTYLMEDFYYAGGLPGLMSRMKEHLHLGCLTVNGRTLGDNI----AD 358 Query: 363 ARTANETAIRPLDQPVTEGAALAVLRGNLAPNGAVIKPSAASPHLLKHRGRALVFDSMAE 422 A N+ IRP P+ ALAVL+GNLAP+G VIKPSA P LKH G ALVFD Sbjct: 359 AGVYNDDVIRPQSNPIYREGALAVLKGNLAPDGCVIKPSACDPRFLKHTGPALVFDDYPS 418 Query: 423 MNASIHDPDLDVDADTVLVLRGGGPIGAPGMPEWGNLPIPKKLLAAGVRDMLRISDARMS 482 M +I DPDLDV AD VL+LR GP G PGMPEWG LPIP KL+ GVRDM+R+SDARMS Sbjct: 419 MKKAIDDPDLDVTADHVLILRNAGPQGGPGMPEWGMLPIPTKLVKQGVRDMVRLSDARMS 478 Query: 483 GTHYGTCVLHVSPESAVGGPLALIRTGDIIELDVAAGSINVLLSEQELAQRRGQWQAPPL 542 GT YG C+LHV+PE+ VGGPLAL+R GD+I LDVAA +I++ + E ELA+RR +WQ PP Sbjct: 479 GTSYGACILHVAPEAYVGGPLALVRNGDLITLDVAARTIDLDVPEDELARRRAEWQ-PPA 537 Query: 543 PR-QRGYIRLYVEHVSQADKGCDFDFL-TGFETPV-EPSIF 580 PR +RGY ++ H+ QA+ GCDFDFL T F P+ EP+I+ Sbjct: 538 PRFERGYGWMFARHIKQANDGCDFDFLETSFGAPIGEPAIY 578