BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4583.p (273 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001339387.1| short-chain dehydrogenase/reductase SDR [Mar... 265 5e-69 ref|ZP_08638471.1| short-chain dehydrogenase/reductase SDR [Halo... 259 2e-67 ref|YP_004474571.1| 3-oxoacyl-(acyl-carrier-protein) reductase [... 232 4e-59 ref|ZP_03268311.1| short-chain dehydrogenase/reductase SDR [Burk... 221 7e-56 ref|YP_004751964.1| putative L-arabinose 1-dehydrogenase [Collim... 216 3e-54 >ref|YP_001339387.1| short-chain dehydrogenase/reductase SDR [Marinomonas sp. MWYL1] gb|ABR69452.1| short-chain dehydrogenase/reductase SDR [Marinomonas sp. MWYL1] Length = 254 Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats. Identities = 135/259 (52%), Positives = 176/259 (67%), Gaps = 7/259 (2%) Query: 8 PLPRASYPWLAGQVVFISGGASGIGEALVKAFWEQGARVAFCDIDPAAGQALCQRLAAQP 67 P YP L +VVFI+GG SGIGE LV F +QGARVA+ DID A+ L Q+LA + Sbjct: 2 PTLTNQYPSLKDKVVFITGGGSGIGEFLVHHFMKQGARVAYIDIDDASSTTLNQKLADE- 60 Query: 68 GSAPARHTPWFAVCDVRDIPAYQVVLDHAAAALGAIRVLVNNAGRDTRHGLDELSVEMWN 127 + TPWF DVRDI A Q +D AA LG + VL+NNAG+D RH +++++ E W+ Sbjct: 61 ----FKVTPWFRKVDVRDIAALQSAIDDAAQELGHLDVLINNAGKDDRHKIEDVTPEYWD 116 Query: 128 DMLSVNLSHHVFATQRVAPGMREAGGGAIINLGSISWLRGRPNLIGYTASKAAISGITRT 187 + L++N+ H F Q A M++ G +IIN+GSISW+RGR ++GYT SK AI +TRT Sbjct: 117 NCLNINMRPHFFGMQAAAKWMKD--GSSIINMGSISWMRGRAGMVGYTTSKGAIHTMTRT 174 Query: 188 LARELGEAGIRVNAVLPGAVVTERQTALWRDASSDRQFLDLQCLKFRVEPTHIADSVLFL 247 +ARELG GIRVN+++PGAVVTERQ ALW D++F+D+Q LKFR+EP I LFL Sbjct: 175 MARELGPRGIRVNSIVPGAVVTERQKALWLTPELDQEFIDVQSLKFRIEPDDIVAMALFL 234 Query: 248 ASPQAAAVTGQNLIVDAGL 266 AS + A GQN IVDAG+ Sbjct: 235 ASQDSRACAGQNFIVDAGI 253 >ref|ZP_08638471.1| short-chain dehydrogenase/reductase SDR [Halomonas sp. TD01] gb|EGP18252.1| short-chain dehydrogenase/reductase SDR [Halomonas sp. TD01] Length = 255 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 138/254 (54%), Positives = 175/254 (68%), Gaps = 9/254 (3%) Query: 13 SYPWLAGQVVFISGGASGIGEALVKAFWEQGARVAFCDIDPAAGQALCQRLAAQPGSAPA 72 +Y L G+ V ISGGASGIG LVKA+ QGA VAF DID AG++L L + A Sbjct: 8 TYQSLNGKRVIISGGASGIGAELVKAYIAQGASVAFLDIDRTAGESLASELGDK-----A 62 Query: 73 RHTPWFAVCDVRDIPAYQVVLDHAAAALGAIRVLVNNAGRDTRHGLDELSVEMWNDMLSV 132 R F CDVRDI Q V+ A G +VL+NNAG D RH L+EL+ + W++ ++ Sbjct: 63 R----FYFCDVRDISRLQAVIADIEVAQGPTQVLINNAGLDDRHTLEELTPDYWDNCQAI 118 Query: 133 NLSHHVFATQRVAPGMREAGGGAIINLGSISWLRGRPNLIGYTASKAAISGITRTLAREL 192 NL HHVFATQ V P M+ G GA+INLGSISW+RGRP ++GYTA+KAAI+G+TRTLA+EL Sbjct: 119 NLRHHVFATQAVLPAMKAEGQGAVINLGSISWMRGRPGMVGYTAAKAAINGLTRTLAQEL 178 Query: 193 GEAGIRVNAVLPGAVVTERQTALWRDASSDRQFLDLQCLKFRVEPTHIADSVLFLASPQA 252 GE GIRVN+++PGA++TERQ LW +++FLD Q LKFR+ +A LFL S ++ Sbjct: 179 GEHGIRVNSLVPGAILTERQERLWLTPEVNQRFLDQQALKFRLRADDVARLALFLGSDES 238 Query: 253 AAVTGQNLIVDAGL 266 TGQN IVDAGL Sbjct: 239 RGCTGQNFIVDAGL 252 >ref|YP_004474571.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Pseudomonas fulva 12-X] gb|AEF22477.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Pseudomonas fulva 12-X] Length = 260 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 130/262 (49%), Positives = 163/262 (62%), Gaps = 6/262 (2%) Query: 4 SPSTPLPRASYPWLAGQVVFISGGASGIGEALVKAFWEQGARVAFCDIDPAAGQALCQRL 63 S + P +A Y LAG+ V ISGGA+GIG ALV AF +QGAR AF DID G+AL L Sbjct: 3 SHNQPSGKAVYADLAGRTVLISGGATGIGRALVTAFAKQGARTAFVDIDDKHGKALASEL 62 Query: 64 AAQPGSAPARHTPWFAVCDVRDIPAYQVVLDHAAAALGAIRVLVNNAGRDTRHGLDELSV 123 A H F CD+ D+ AYQ + A G I L+NNA D RH LD +SV Sbjct: 63 TE------AGHQVLFLRCDITDVKAYQAAIHKVAEQFGPITALLNNAANDVRHALDSISV 116 Query: 124 EMWNDMLSVNLSHHVFATQRVAPGMREAGGGAIINLGSISWLRGRPNLIGYTASKAAISG 183 E ++++++VNL H FATQ V P MR+AGGGAIIN GS+ W+ Y ASKAA G Sbjct: 117 ERFDELIAVNLRHATFATQAVVPMMRQAGGGAIINFGSVGWMMASAGYPVYAASKAATHG 176 Query: 184 ITRTLARELGEAGIRVNAVLPGAVVTERQTALWRDASSDRQFLDLQCLKFRVEPTHIADS 243 +TR LAR+LG+ IRVN ++PG V+TE+Q A+W D ++ Q QC+ ++ P HIAD Sbjct: 177 LTRGLARDLGKDRIRVNTLVPGWVMTEKQLAMWVDEAAKEQIRQNQCMPGQLLPEHIADM 236 Query: 244 VLFLASPQAAAVTGQNLIVDAG 265 LFLAS AA T QN IVD G Sbjct: 237 ALFLASDAAAMCTAQNFIVDGG 258 >ref|ZP_03268311.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. H160] gb|EEA00119.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. H160] Length = 255 Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats. Identities = 119/254 (46%), Positives = 157/254 (61%), Gaps = 6/254 (2%) Query: 12 ASYPWLAGQVVFISGGASGIGEALVKAFWEQGARVAFCDIDPAAGQALCQRLAAQPGSAP 71 A YP L+ + + ++GG SGIG A+V+AF +QGARV F D+ A LA Q Sbjct: 4 AIYPSLSDKTIVVTGGGSGIGAAMVEAFAQQGARVFFLDV------AEHDSLALQEALRH 57 Query: 72 ARHTPWFAVCDVRDIPAYQVVLDHAAAALGAIRVLVNNAGRDTRHGLDELSVEMWNDMLS 131 A+H P F CD++++ A + A G I VLVNNAG D RH + EL+ W+D ++ Sbjct: 58 AKHPPKFRRCDLKNVDAIESTFAAIVDAAGPIDVLVNNAGNDDRHEIGELTASYWDDRIA 117 Query: 132 VNLSHHVFATQRVAPGMREAGGGAIINLGSISWLRGRPNLIGYTASKAAISGITRTLARE 191 VNL HH F Q A MR AG G I+NLGS+SW PNL Y +KA I G+TR LAR+ Sbjct: 118 VNLRHHFFCAQAAAKSMRRAGRGVILNLGSVSWHVALPNLAIYMTAKAGIEGLTRGLARD 177 Query: 192 LGEAGIRVNAVLPGAVVTERQTALWRDASSDRQFLDLQCLKFRVEPTHIADSVLFLASPQ 251 LG GIRVN ++PGAV T RQ LW+ A S+ + + QCL+ R+EP H+A LFLAS Sbjct: 178 LGGVGIRVNCIIPGAVKTPRQMQLWQSAESEAKVVASQCLQLRIEPEHVARMALFLASDD 237 Query: 252 AAAVTGQNLIVDAG 265 A+ +G++ VDAG Sbjct: 238 ASRCSGRDYFVDAG 251 >ref|YP_004751964.1| putative L-arabinose 1-dehydrogenase [Collimonas fungivorans Ter331] gb|AEK61141.1| putative L-arabinose 1-dehydrogenase [Collimonas fungivorans Ter331] Length = 260 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 130/256 (50%), Positives = 164/256 (64%), Gaps = 5/256 (1%) Query: 12 ASYPWLAGQVVFISGGASGIGEALVKAFWEQGARVAFCDIDPAAGQALCQRLAAQPGSAP 71 A +P L G+ VF++GG SGIG A+V AF EQGARVAF DI+ AA +ALC++LAA Sbjct: 10 AHFPSLKGKNVFVTGGGSGIGAAIVGAFAEQGARVAFVDIETAASEALCEQLAAA----- 64 Query: 72 ARHTPWFAVCDVRDIPAYQVVLDHAAAALGAIRVLVNNAGRDTRHGLDELSVEMWNDMLS 131 P F CD+RDI A Q ++ A LG VLVNNA D RH +E++V+ WND ++ Sbjct: 65 GLPRPLFRHCDIRDIAALQSTIEGLAQELGDFDVLVNNAANDQRHQWEEVTVDYWNDRIA 124 Query: 132 VNLSHHVFATQRVAPGMREAGGGAIINLGSISWLRGRPNLIGYTASKAAISGITRTLARE 191 +N F Q VAPGMR+ GGG+IINL SISW YT +KAA+ G+TR LAR+ Sbjct: 125 INQRPMFFTCQAVAPGMRKKGGGSIINLSSISWHLSNGGYPVYTTAKAAVVGLTRGLARD 184 Query: 192 LGEAGIRVNAVLPGAVVTERQTALWRDASSDRQFLDLQCLKFRVEPTHIADSVLFLASPQ 251 LG IRVN V PG V+TERQ ALW DA+ + QCL +++P H+A VLFLA+ Sbjct: 185 LGPHNIRVNTVSPGWVMTERQIALWLDAAGEEDIKRNQCLPGKLQPWHLARMVLFLAADD 244 Query: 252 AAAVTGQNLIVDAGLA 267 +A T Q IVDAG A Sbjct: 245 SAMCTAQEFIVDAGWA 260