BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4578.p (498 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001892362.1| Na+/solute symporter [Ralstonia pickettii 12... 688 0.0 ref|ZP_07673971.1| transporter, solute:sodium symporter (SSS) fa... 683 0.0 ref|YP_002824475.1| monocarboxylic acid permease [Sinorhizobium ... 576 e-162 ref|YP_001523938.1| monocarboxylic acid permease [Azorhizobium c... 575 e-162 ref|YP_001831224.1| Na+/solute symporter [Beijerinckia indica su... 556 e-156 >ref|YP_001892362.1| Na+/solute symporter [Ralstonia pickettii 12J] ref|YP_002983863.1| Na+/solute symporter [Ralstonia pickettii 12D] gb|ACD28935.1| Na+/solute symporter [Ralstonia pickettii 12J] gb|ACS65191.1| Na+/solute symporter [Ralstonia pickettii 12D] Length = 502 Score = 688 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 411/496 (82%), Positives = 450/496 (90%), Gaps = 4/496 (0%) Query: 7 IHWTALWVFLFFFVLVTVMGFLASKWMAGPSNKGAHLDEWGLGGRNFGTWITWFLVGGDF 66 I+WTAL VF+FFF LVTVMGF+AS+W G S+KGAH++EWGLGGRNFGTWITWFLVGGDF Sbjct: 5 INWTALAVFVFFFALVTVMGFIASRWQRGQSDKGAHIEEWGLGGRNFGTWITWFLVGGDF 64 Query: 67 YTAYTVIAVPALVYAVGAYGFFALPYTILVYPIVFVIMPKLWHAAHKAGHVTAADVVWGR 126 YTAYTVIAVPALVYAVGAYGFFALPYTILVYPIVF+IMPKLW AH GHVTAAD V+GR Sbjct: 65 YTAYTVIAVPALVYAVGAYGFFALPYTILVYPIVFLIMPKLWKVAHAKGHVTAADAVYGR 124 Query: 127 YQSRPLEFAIALTGVVATMPYIALQLIGMEVVIKALGLTGELPLLAAFVILALYTYSAGL 186 Y SRPLEFA+ALTGVVATMPYIALQLIGMEVVIKALGLTGELPL AAFVILALYTYSAGL Sbjct: 125 YGSRPLEFAVALTGVVATMPYIALQLIGMEVVIKALGLTGELPLAAAFVILALYTYSAGL 184 Query: 187 RAPALIAFVKDIMIYIVVLVAVVVVPAKLGGYGAVFNSAREAFAIKGGATGLTLKPTQFL 246 RAPALIAFVKDIMIYIVVLVAVV+VPAKLGGYGAVF A +AFA+KGGATGLTLKP QFL Sbjct: 185 RAPALIAFVKDIMIYIVVLVAVVLVPAKLGGYGAVFAHAHDAFAVKGGATGLTLKPAQFL 244 Query: 247 PFASLALGSALAAFMYPHTLTGIFAAKDANTIRKNAVFLPAYTVLLGLIALLGYMAYAAG 306 PFA+LA+GSALAAFMYPHTLTGIFAA+ A+TIRKNAVFLPAYTVLLGLIALLG+MAYAAG Sbjct: 245 PFATLAIGSALAAFMYPHTLTGIFAARSADTIRKNAVFLPAYTVLLGLIALLGFMAYAAG 304 Query: 307 IKVQANNDVVPALFNGLFPGWFAGFAFAAIAIGALVPAAVMSIGASNLFTRNFWKPYVNP 366 +KV NNDVVPALFN LFP WF GFAF+AIAIGALVPAAVMSIGA+NLFTRNFWKPYV P Sbjct: 305 VKVTNNNDVVPALFNALFPSWFTGFAFSAIAIGALVPAAVMSIGAANLFTRNFWKPYVAP 364 Query: 367 GISHEGEAKVAKVVSLVVKFGALVFILFLPTKFALDLQLLGGVWILQTFPALVFGLF--V 424 +SH GE KVAKV+SL+VK GALVFILFLPTKFALDLQLLGGVWI+QTFP++VFGLF Sbjct: 365 DLSHAGEEKVAKVISLIVKAGALVFILFLPTKFALDLQLLGGVWIVQTFPSVVFGLFKLS 424 Query: 425 GWFGARALLCGWAVGIVGGSWLAFSDGIKPVHSFLIGGETYTLYTGLIALALNVVVAVIA 484 F A ALL GWA G++GGSWLAF+DGIKPVH+F+IGG+ YT+YTGL ALA N+VVAV+ Sbjct: 425 NRFRAPALLAGWAAGMIGGSWLAFTDGIKPVHTFVIGGDKYTIYTGLAALAFNIVVAVVV 484 Query: 485 NLILGKGSQ--PALKR 498 LI GK + PAL++ Sbjct: 485 QLIFGKRGEEAPALRQ 500 >ref|ZP_07673971.1| transporter, solute:sodium symporter (SSS) family [Ralstonia sp. 5_7_47FAA] gb|EFP67646.1| transporter, solute:sodium symporter (SSS) family [Ralstonia sp. 5_7_47FAA] Length = 502 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 407/492 (82%), Positives = 447/492 (90%), Gaps = 2/492 (0%) Query: 6 NIHWTALWVFLFFFVLVTVMGFLASKWMAGPSNKGAHLDEWGLGGRNFGTWITWFLVGGD 65 +I+WTAL VF+FFF LVTV+GF+AS+W G S+KGAH++EWGLGGRNFGTWITWFLVGGD Sbjct: 4 HINWTALAVFIFFFALVTVLGFIASRWQRGNSDKGAHIEEWGLGGRNFGTWITWFLVGGD 63 Query: 66 FYTAYTVIAVPALVYAVGAYGFFALPYTILVYPIVFVIMPKLWHAAHKAGHVTAADVVWG 125 FYTAYTVIAVPALVYAVGAYGFFALPYTILVYPIVF+IMPKLW AH GHVTAAD V+G Sbjct: 64 FYTAYTVIAVPALVYAVGAYGFFALPYTILVYPIVFLIMPKLWKVAHANGHVTAADAVYG 123 Query: 126 RYQSRPLEFAIALTGVVATMPYIALQLIGMEVVIKALGLTGELPLLAAFVILALYTYSAG 185 RY SR LEFA+ALTGVVATMPYIALQLIGMEVVIKALGLTGELPL AAFVILALYTYSAG Sbjct: 124 RYGSRSLEFAVALTGVVATMPYIALQLIGMEVVIKALGLTGELPLAAAFVILALYTYSAG 183 Query: 186 LRAPALIAFVKDIMIYIVVLVAVVVVPAKLGGYGAVFNSAREAFAIKGGATGLTLKPTQF 245 LRAPALIAFVKDIMIYIVVLVAVV+VPAKLGGYGAVF +A +AFAIKGGATGLTLKP QF Sbjct: 184 LRAPALIAFVKDIMIYIVVLVAVVLVPAKLGGYGAVFANAHDAFAIKGGATGLTLKPAQF 243 Query: 246 LPFASLALGSALAAFMYPHTLTGIFAAKDANTIRKNAVFLPAYTVLLGLIALLGYMAYAA 305 LPFA+LA+GSALAAFMYPHTLTGIFAA+ A+TIRKNAVFLPAYTVLLGLIALLG+MAYAA Sbjct: 244 LPFATLAIGSALAAFMYPHTLTGIFAARSADTIRKNAVFLPAYTVLLGLIALLGFMAYAA 303 Query: 306 GIKVQANNDVVPALFNGLFPGWFAGFAFAAIAIGALVPAAVMSIGASNLFTRNFWKPYVN 365 GIKV NNDVVPALFN LFP WF GFAF+AIAIGALVPAAVMSIGA+NLFTRNFWKPYV Sbjct: 304 GIKVTNNNDVVPALFNALFPSWFTGFAFSAIAIGALVPAAVMSIGAANLFTRNFWKPYVA 363 Query: 366 PGISHEGEAKVAKVVSLVVKFGALVFILFLPTKFALDLQLLGGVWILQTFPALVFGLF-- 423 P +SH GE KVAKV+SL+VK GALVFILFLPTKFALDLQLLGGVWI+QTFP++VFGLF Sbjct: 364 PDLSHAGEEKVAKVISLIVKAGALVFILFLPTKFALDLQLLGGVWIVQTFPSVVFGLFNI 423 Query: 424 VGWFGARALLCGWAVGIVGGSWLAFSDGIKPVHSFLIGGETYTLYTGLIALALNVVVAVI 483 F A ALL GWA G++ GSWLAFSDGIKPVH+F+IGG+ YT+YTGL ALA N++VAV+ Sbjct: 424 SNRFRAPALLAGWAAGMIAGSWLAFSDGIKPVHTFVIGGDKYTIYTGLAALAFNIIVAVV 483 Query: 484 ANLILGKGSQPA 495 L++GK + A Sbjct: 484 VQLLMGKRGEEA 495 >ref|YP_002824475.1| monocarboxylic acid permease [Sinorhizobium fredii NGR234] gb|ACP23722.1| predicted monocarboxylic acid permease [Sinorhizobium fredii NGR234] Length = 502 Score = 576 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 343/471 (72%), Positives = 398/471 (84%), Gaps = 3/471 (0%) Query: 4 TSNIHWTALWVFLFFFVLVTVMGFLASKWMAGPSNKGAHLDEWGLGGRNFGTWITWFLVG 63 T+NI +AL VF+FFFVLVT MGF AS+W S HLDEWGLGGR FGTWITWFLVG Sbjct: 2 TANIDMSALAVFIFFFVLVTAMGFFASRWRRAESLD--HLDEWGLGGRKFGTWITWFLVG 59 Query: 64 GDFYTAYTVIAVPALVYAVGAYGFFALPYTILVYPIVFVIMPKLWHAAHKAGHVTAADVV 123 GDFYTAYTVIAVPALVYA+GAYGFFALPYTI+VYP+VF +MP LW AA + G+VTA DVV Sbjct: 60 GDFYTAYTVIAVPALVYAIGAYGFFALPYTIIVYPLVFAVMPLLWKAAKERGYVTAGDVV 119 Query: 124 WGRYQSRPLEFAIALTGVVATMPYIALQLIGMEVVIKALGLTGELPLLAAFVILALYTYS 183 G Y SR LE A+A TGV+ATMPYIALQLIGMEV IKALGLTGE+P++ AF++LALYTYS Sbjct: 120 RGTYGSRALELAVASTGVIATMPYIALQLIGMEVAIKALGLTGEMPIVLAFLVLALYTYS 179 Query: 184 AGLRAPALIAFVKDIMIYIVVLVAVVVVPAKLGGYGAVFNSAREAFAIKGGATGLTLKPT 243 +GLRAPALIAFVKDIMIYIVVL A++VVP+KLGGY AVF++A AF KG G+ L P Sbjct: 180 SGLRAPALIAFVKDIMIYIVVLAAIIVVPSKLGGYSAVFSAADAAFEAKGKG-GILLDPA 238 Query: 244 QFLPFASLALGSALAAFMYPHTLTGIFAAKDANTIRKNAVFLPAYTVLLGLIALLGYMAY 303 Q +P+ +LALGSALAAFMYPHTLTGIFA+ ANTIRKNAV LPAYT+LLGL+ALLGYM + Sbjct: 239 QLVPYVTLALGSALAAFMYPHTLTGIFASSGANTIRKNAVLLPAYTLLLGLLALLGYMGH 298 Query: 304 AAGIKVQANNDVVPALFNGLFPGWFAGFAFAAIAIGALVPAAVMSIGASNLFTRNFWKPY 363 AAG+++Q+NNDVVP LF LFPGWFAGFAF+AIAIGALVPAAVMSIGA+NLFTRNFWK + Sbjct: 299 AAGLQLQSNNDVVPTLFKTLFPGWFAGFAFSAIAIGALVPAAVMSIGAANLFTRNFWKVW 358 Query: 364 VNPGISHEGEAKVAKVVSLVVKFGALVFILFLPTKFALDLQLLGGVWILQTFPALVFGLF 423 VNP ++ GEA+VAK+ S++VK GALV IL LPT+FALDLQLLGG+WILQT PALVFGL+ Sbjct: 359 VNPDVTAAGEAQVAKITSMLVKVGALVAILLLPTQFALDLQLLGGLWILQTLPALVFGLY 418 Query: 424 VGWFGARALLCGWAVGIVGGSWLAFSDGIKPVHSFLIGGETYTLYTGLIAL 474 WF A ALL GWA G +GGS L +SDG+KP+H+ G T ++YTGL+AL Sbjct: 419 TSWFRAPALLAGWAAGFIGGSALVWSDGLKPLHALAFDGVTVSVYTGLLAL 469 >ref|YP_001523938.1| monocarboxylic acid permease [Azorhizobium caulinodans ORS 571] dbj|BAF87020.1| monocarboxylic acid permease [Azorhizobium caulinodans ORS 571] Length = 494 Score = 575 bits (1481), Expect = e-162, Method: Composition-based stats. Identities = 348/464 (75%), Positives = 396/464 (85%), Gaps = 2/464 (0%) Query: 9 WTALWVFLFFFVLVTVMGFLASKWMAGPSNKGAHLDEWGLGGRNFGTWITWFLVGGDFYT 68 W L VFL FF LVT+MGF+AS+W ++ A LDEWGLGGR FG WITWFLVGGDFYT Sbjct: 7 WAELSVFLVFFALVTIMGFVASRWKK--ADNHAKLDEWGLGGRQFGVWITWFLVGGDFYT 64 Query: 69 AYTVIAVPALVYAVGAYGFFALPYTILVYPIVFVIMPKLWHAAHKAGHVTAADVVWGRYQ 128 AYTVIAVPALVYAVGAYGFFALPYTI+VYP +F++MP+LW AH AGHVTAADVV G Y Sbjct: 65 AYTVIAVPALVYAVGAYGFFALPYTIVVYPFIFLVMPRLWKVAHAAGHVTAADVVHGTYN 124 Query: 129 SRPLEFAIALTGVVATMPYIALQLIGMEVVIKALGLTGELPLLAAFVILALYTYSAGLRA 188 +R LE A+ALTG+VATMPYIALQL+GM+ VI A+GL GELP++ AF+ILALYTYSAGLRA Sbjct: 125 NRWLELAVALTGLVATMPYIALQLVGMQAVIGAMGLKGELPIIVAFLILALYTYSAGLRA 184 Query: 189 PALIAFVKDIMIYIVVLVAVVVVPAKLGGYGAVFNSAREAFAIKGGATGLTLKPTQFLPF 248 PALIAFVKD+MIYIVV+VAVVVVP LGGYGAVF++A +A KGG TGL LK Q LP+ Sbjct: 185 PALIAFVKDVMIYIVVIVAVVVVPMHLGGYGAVFSAADAVYAAKGGNTGLVLKDAQMLPY 244 Query: 249 ASLALGSALAAFMYPHTLTGIFAAKDANTIRKNAVFLPAYTVLLGLIALLGYMAYAAGIK 308 A+LALGSALAAFMYPHTLTGIFAAK ANTIR NAV LPAYTVLLGLIALLGYMA+AAG+K Sbjct: 245 ATLALGSALAAFMYPHTLTGIFAAKSANTIRSNAVLLPAYTVLLGLIALLGYMAHAAGVK 304 Query: 309 VQANNDVVPALFNGLFPGWFAGFAFAAIAIGALVPAAVMSIGASNLFTRNFWKPYVNPGI 368 V + DVVP LF LF GWF+GFAFAAI IGALVPAAVMSIGASNLFTRN WK YVNP + Sbjct: 305 VTSPTDVVPVLFQTLFSGWFSGFAFAAIGIGALVPAAVMSIGASNLFTRNVWKAYVNPQV 364 Query: 369 SHEGEAKVAKVVSLVVKFGALVFILFLPTKFALDLQLLGGVWILQTFPALVFGLFVGWFG 428 + GEA+VAK+VSLVVK GAL I+F+PTKFA+DLQLLGG+WILQTFP+LVFGLF WF Sbjct: 365 TEAGEAQVAKIVSLVVKVGALACIVFMPTKFAIDLQLLGGLWILQTFPSLVFGLFTRWFR 424 Query: 429 ARALLCGWAVGIVGGSWLAFSDGIKPVHSFLIGGETYTLYTGLI 472 A ALL GW VGIVGG+ +AF+DG+ PVH+ +IGG+ YT+Y GL+ Sbjct: 425 APALLAGWLVGIVGGTTVAFADGLVPVHTLVIGGQNYTIYVGLL 468 >ref|YP_001831224.1| Na+/solute symporter [Beijerinckia indica subsp. indica ATCC 9039] gb|ACB93735.1| Na+/solute symporter [Beijerinckia indica subsp. indica ATCC 9039] Length = 498 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 343/484 (70%), Positives = 405/484 (83%), Gaps = 3/484 (0%) Query: 5 SNIHWTALWVFLFFFVLVTVMGFLASKWMAGPSNKGAHLDEWGLGGRNFGTWITWFLVGG 64 + I + AL VFLFFFVLVT++GF+A+ W + AH+DEWGLGGR FGTWITWFLVGG Sbjct: 3 TEIDYAALGVFLFFFVLVTLLGFVAAYWRRPKTL--AHIDEWGLGGRQFGTWITWFLVGG 60 Query: 65 DFYTAYTVIAVPALVYAVGAYGFFALPYTILVYPIVFVIMPKLWHAAHKAGHVTAADVVW 124 DFYTAYTVIAVPALVYA GA+GFFALPYTI+VYP VF +MP LW A +VTAADVV Sbjct: 61 DFYTAYTVIAVPALVYATGAFGFFALPYTIIVYPFVFAVMPILWKVAKDNNYVTAADVVH 120 Query: 125 GRYQSRPLEFAIALTGVVATMPYIALQLIGMEVVIKALGLTGELPLLAAFVILALYTYSA 184 GRY SR LE A+A TGV+ATMPYIALQL+GM VI+ALGLTGELPL+ AF++LA YTYS+ Sbjct: 121 GRYGSRGLELAVAATGVIATMPYIALQLVGMAAVIQALGLTGELPLIIAFLVLAFYTYSS 180 Query: 185 GLRAPALIAFVKDIMIYIVVLVAVVVVPAKLGGYGAVFNSAREAFAIKGGATGLTLKPTQ 244 GLRAPALIAFVKD+MIYIVVLVA+ +VP KLGGYGAVF +A+ AF KG G+ L P Q Sbjct: 181 GLRAPALIAFVKDVMIYIVVLVAIAIVPFKLGGYGAVFQAAQAAFEAKGSG-GILLAPAQ 239 Query: 245 FLPFASLALGSALAAFMYPHTLTGIFAAKDANTIRKNAVFLPAYTVLLGLIALLGYMAYA 304 +P+ASLAL SALAAFMYPHTLTGIFA++ +TIRKNA+ LPAYT+LLGL+ALLGYM +A Sbjct: 240 MVPYASLALVSALAAFMYPHTLTGIFASRSGDTIRKNAMLLPAYTLLLGLLALLGYMGHA 299 Query: 305 AGIKVQANNDVVPALFNGLFPGWFAGFAFAAIAIGALVPAAVMSIGASNLFTRNFWKPYV 364 AG+K+ NNDVVPALF LFPGWFAGF+FAAIAIGALVPAAVMSIGA+NLFTRNFWK YV Sbjct: 300 AGLKLSHNNDVVPALFQTLFPGWFAGFSFAAIAIGALVPAAVMSIGAANLFTRNFWKAYV 359 Query: 365 NPGISHEGEAKVAKVVSLVVKFGALVFILFLPTKFALDLQLLGGVWILQTFPALVFGLFV 424 NP ++ GEA+VAK+ S++VK GAL+ I++LPT+FALDLQLLGG+WILQTFPAL+FGLF Sbjct: 360 NPQVTPAGEAQVAKITSMLVKVGALLVIIYLPTQFALDLQLLGGLWILQTFPALIFGLFT 419 Query: 425 GWFGARALLCGWAVGIVGGSWLAFSDGIKPVHSFLIGGETYTLYTGLIALALNVVVAVIA 484 +F A+ALL GWAVG V G++LA+SDG+KP+H + G TLY GLIAL LN++VA I Sbjct: 420 RFFKAKALLIGWAVGFVVGTYLAWSDGLKPLHKLVYGDWNVTLYVGLIALTLNILVAAIL 479 Query: 485 NLIL 488 +L L Sbjct: 480 SLFL 483