BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4575.p (283 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001206252.1| putative D-methionine ABC transporter perisp... 347 8e-94 ref|YP_001239301.1| putative D-methionine ABC transporter perisp... 343 2e-92 ref|YP_553753.1| putative outer membrane lipoprotein [Burkholder... 339 2e-91 ref|ZP_06839119.1| NLPA lipoprotein [Burkholderia sp. Ch1-1] >gi... 336 2e-90 ref|ZP_03267076.1| NLPA lipoprotein [Burkholderia sp. H160] >gi|... 332 6e-89 >ref|YP_001206252.1| putative D-methionine ABC transporter perisplasmic binding lipoprotein (metQ-like) [Bradyrhizobium sp. ORS 278] emb|CAL78027.1| putative D-methionine ABC transporter, perisplasmic binding lipoprotein (metQ-like) [Bradyrhizobium sp. ORS 278] Length = 275 Score = 347 bits (891), Expect = 8e-94, Method: Composition-based stats. Identities = 170/261 (65%), Positives = 208/261 (79%) Query: 11 LSQIVLLAVALVGSAQAAPPVRELKLGFVPGPYIDEFKLGVQPQLEQKGYKIRYYEFSTG 70 L+ VLL V++ G+ A +ELK+GFVPGPYIDEFK+GV P+L++KGY+IRY EFSTG Sbjct: 13 LAASVLLIVSVSGAWAQASEKKELKVGFVPGPYIDEFKIGVAPELQKKGYQIRYVEFSTG 72 Query: 71 LEANSAVFKGDIDANVMQHSVFLASYNERNKTDLVGIVQVPTPPMGLYSRKHKSLDNLKK 130 LEAN+AVFK +IDANVMQH++FL SYNER TDL GIV VPTPPMG+YS+KH + + Sbjct: 73 LEANNAVFKSEIDANVMQHTIFLNSYNERQNTDLTGIVHVPTPPMGIYSKKHPLGTKIGQ 132 Query: 131 GFTVAVPNDPVNLQRALWILQRLGWIRIRENKPVDVTELDVVENKVGLKLVLLENAQGPR 190 G +AVPNDPVNLQRALWIL+ LG I IR++KP+DVTELDV++N G+K+V LE AQ PR Sbjct: 133 GAKIAVPNDPVNLQRALWILRDLGLIEIRDSKPIDVTELDVIKNPGGIKIVPLEAAQAPR 192 Query: 191 ALDDADFAAIQGNFAIFAKLKLSEAFILEDMKPPYINVVAVKKTKQDETYAQDIVQAYRS 250 ALDD DFAAIQGNFAIF+ LKL+ AF LE M PYINVVAVK+ + +A+DIV Y+S Sbjct: 193 ALDDVDFAAIQGNFAIFSGLKLTNAFALEKMTTPYINVVAVKRGNAETAWAKDIVDGYKS 252 Query: 251 EFFQKAIRSEPFYDGFTLPDY 271 F+ AI ++ FYDGFTLPDY Sbjct: 253 PGFKAAILADRFYDGFTLPDY 273 >ref|YP_001239301.1| putative D-methionine ABC transporter perisplasmic binding lipoprotein [Bradyrhizobium sp. BTAi1] gb|ABQ35395.1| putative D-methionine ABC transporter, perisplasmic binding lipoprotein [Bradyrhizobium sp. BTAi1] Length = 275 Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 173/270 (64%), Positives = 211/270 (78%), Gaps = 6/270 (2%) Query: 8 LLRLSQIVLLAVALVGSAQA------APPVRELKLGFVPGPYIDEFKLGVQPQLEQKGYK 61 L RL + L+AV+++ A + ++LK+GFVPGPYIDEFK+GV P+L +KGY+ Sbjct: 4 LTRLRFLGLMAVSVLSIAAGDNALAQSAEKKDLKVGFVPGPYIDEFKIGVAPELAKKGYQ 63 Query: 62 IRYYEFSTGLEANSAVFKGDIDANVMQHSVFLASYNERNKTDLVGIVQVPTPPMGLYSRK 121 IRY EFSTGLEAN+AVFK +IDANVMQH+VFL SYNER KTDLVGIV VPTPPMG+YS+K Sbjct: 64 IRYVEFSTGLEANNAVFKSEIDANVMQHTVFLNSYNERQKTDLVGIVHVPTPPMGIYSKK 123 Query: 122 HKSLDNLKKGFTVAVPNDPVNLQRALWILQRLGWIRIRENKPVDVTELDVVENKVGLKLV 181 H + G VAVPNDPVNLQRALWIL+ LG + IR++KP+DVTELDVV+N G+K++ Sbjct: 124 HPLGTKIGAGAKVAVPNDPVNLQRALWILRDLGLVEIRDSKPIDVTELDVVKNPGGIKII 183 Query: 182 LLENAQGPRALDDADFAAIQGNFAIFAKLKLSEAFILEDMKPPYINVVAVKKTKQDETYA 241 LE AQ PRALDD DFAAIQGNFAIF+ LKL+ AF LE M PYINVVAVK+ + +A Sbjct: 184 PLEAAQAPRALDDVDFAAIQGNFAIFSGLKLTNAFALERMTAPYINVVAVKRDNAETAWA 243 Query: 242 QDIVQAYRSEFFQKAIRSEPFYDGFTLPDY 271 +DIV AY+S F+ AI ++ FYDGFTLPDY Sbjct: 244 KDIVAAYKSPGFKAAILADRFYDGFTLPDY 273 >ref|YP_553753.1| putative outer membrane lipoprotein [Burkholderia xenovorans LB400] gb|ABE34403.1| Putative outer membrane lipoprotein [Burkholderia xenovorans LB400] Length = 291 Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats. Identities = 171/272 (62%), Positives = 208/272 (76%), Gaps = 8/272 (2%) Query: 10 RLSQIVLLAVALVG-------SAQAAPPVRELKLGFVPGPYIDEFKLGVQPQLEQKGYKI 62 R++ +LLA L G + + P +EL++GFVPGPY DEFK GV+PQL +KGY + Sbjct: 18 RITGTLLLAATLAGFTAPTAYATDSGAPSQELRVGFVPGPYADEFKAGVEPQLRKKGYAV 77 Query: 63 RYYEFSTGLEANSAVFKGDIDANVMQHSVFLASYNERNKTDLVGIVQVPTPPMGLYSRKH 122 RY EFSTGLEAN AV++G+I A+VMQH V+L SYN+RN TDLVG+VQVPTPPMGLYS KH Sbjct: 78 RYIEFSTGLEANQAVYRGEIIADVMQHEVYLKSYNDRNGTDLVGVVQVPTPPMGLYSSKH 137 Query: 123 KSLDNLKKGFTVAVPNDPVNLQRALWILQRLGWIRIREN-KPVDVTELDVVENKVGLKLV 181 SL +K G VAVPNDPVNL+RAL ILQR+GWIRI+ N PVDVTE DV+ N G+K+V Sbjct: 138 HSLAEVKPGTRVAVPNDPVNLERALKILQRIGWIRIKPNPNPVDVTERDVIANPAGIKIV 197 Query: 182 LLENAQGPRALDDADFAAIQGNFAIFAKLKLSEAFILEDMKPPYINVVAVKKTKQDETYA 241 LE+AQ PRAL+D D+AAIQGNFAIF+ KL++A LE+M PPYIN V VK + ++ Sbjct: 198 PLESAQAPRALEDVDYAAIQGNFAIFSGHKLTDALALEEMTPPYINQVVVKASNRNARAT 257 Query: 242 QDIVQAYRSEFFQKAIRSEPFYDGFTLPDYFS 273 QDIVQAY+S FQ+AIRS FYDGF LP YFS Sbjct: 258 QDIVQAYQSADFQRAIRSNRFYDGFRLPAYFS 289 >ref|ZP_06839119.1| NLPA lipoprotein [Burkholderia sp. Ch1-1] gb|EFG73565.1| NLPA lipoprotein [Burkholderia sp. Ch1-1] Length = 291 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 166/251 (66%), Positives = 200/251 (79%), Gaps = 1/251 (0%) Query: 24 SAQAAPPVRELKLGFVPGPYIDEFKLGVQPQLEQKGYKIRYYEFSTGLEANSAVFKGDID 83 +A + P +EL++GFVPGPY DEFK GV+PQL +KGY +RY EFSTGLEAN AV++G+I Sbjct: 39 AADSGAPSQELRVGFVPGPYADEFKAGVEPQLRKKGYAVRYVEFSTGLEANQAVYRGEII 98 Query: 84 ANVMQHSVFLASYNERNKTDLVGIVQVPTPPMGLYSRKHKSLDNLKKGFTVAVPNDPVNL 143 A+VMQH V+L SYN+RN TDLVG+VQVPTPPMGLYS KH SL +K G VAVPNDPVNL Sbjct: 99 ADVMQHEVYLKSYNDRNGTDLVGVVQVPTPPMGLYSSKHHSLAEVKPGTRVAVPNDPVNL 158 Query: 144 QRALWILQRLGWIRIREN-KPVDVTELDVVENKVGLKLVLLENAQGPRALDDADFAAIQG 202 +RAL ILQR+GWIRI+ N PVDVTE DV+ N G+K+V LE+AQ PRAL+D D+AAIQG Sbjct: 159 ERALKILQRIGWIRIKPNPNPVDVTERDVIANPAGIKIVPLESAQAPRALEDVDYAAIQG 218 Query: 203 NFAIFAKLKLSEAFILEDMKPPYINVVAVKKTKQDETYAQDIVQAYRSEFFQKAIRSEPF 262 NFAIF+ KL++A LE+M PPYIN V VK + ++ QDIVQAY+S FQ+AIRS F Sbjct: 219 NFAIFSGHKLTDALALEEMTPPYINQVVVKASNRNARATQDIVQAYQSADFQRAIRSNRF 278 Query: 263 YDGFTLPDYFS 273 YDGF LP YFS Sbjct: 279 YDGFRLPAYFS 289 >ref|ZP_03267076.1| NLPA lipoprotein [Burkholderia sp. H160] gb|EEA01300.1| NLPA lipoprotein [Burkholderia sp. H160] Length = 300 Score = 332 bits (850), Expect = 6e-89, Method: Composition-based stats. Identities = 165/245 (67%), Positives = 195/245 (79%), Gaps = 1/245 (0%) Query: 29 PPVRELKLGFVPGPYIDEFKLGVQPQLEQKGYKIRYYEFSTGLEANSAVFKGDIDANVMQ 88 P +EL++GFVPGPY DEF+ GV+PQL +KGY I+Y EFSTGLEAN AV++G+I A+VMQ Sbjct: 53 PAPQELRIGFVPGPYADEFRQGVEPQLRKKGYSIKYVEFSTGLEANQAVYRGEIVADVMQ 112 Query: 89 HSVFLASYNERNKTDLVGIVQVPTPPMGLYSRKHKSLDNLKKGFTVAVPNDPVNLQRALW 148 H V+L SYN+RN TDLVG+VQVPTPPMGLYS +H SL ++K G VAVPNDPVNL+RAL Sbjct: 113 HEVYLKSYNDRNGTDLVGVVQVPTPPMGLYSTRHHSLADVKPGARVAVPNDPVNLERALK 172 Query: 149 ILQRLGWIRIREN-KPVDVTELDVVENKVGLKLVLLENAQGPRALDDADFAAIQGNFAIF 207 ILQR+GWIRI+ N PVDVTE DV+ N G+KLV LE+AQ PRALDD D+AAIQGNFAIF Sbjct: 173 ILQRVGWIRIKPNPNPVDVTEQDVIANPAGIKLVPLESAQAPRALDDVDYAAIQGNFAIF 232 Query: 208 AKLKLSEAFILEDMKPPYINVVAVKKTKQDETYAQDIVQAYRSEFFQKAIRSEPFYDGFT 267 + KL+EA LE M PPYIN V VK ++ QDIVQAY+S FQ+AIRS FYDGF Sbjct: 233 SGHKLTEALALEQMTPPYINQVVVKAANRNGKATQDIVQAYQSADFQRAIRSNHFYDGFR 292 Query: 268 LPDYF 272 LP YF Sbjct: 293 LPAYF 297