BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4574.p (478 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_553764.1| putative nitrilotriacetate monooxygenase subuni... 647 0.0 ref|ZP_06839109.1| Luciferase-like, subgroup [Burkholderia sp. C... 645 0.0 ref|ZP_03267621.1| Luciferase-like monooxygenase [Burkholderia s... 636 e-180 ref|YP_003609276.1| Luciferase-like, subgroup [Burkholderia sp. ... 630 e-178 ref|YP_555435.1| putative monooxygenase [Burkholderia xenovorans... 630 e-178 >ref|YP_553764.1| putative nitrilotriacetate monooxygenase subunit A [Burkholderia xenovorans LB400] gb|ABE34414.1| putative nitrilotriacetate monooxygenase subunit A [Burkholderia xenovorans LB400] Length = 451 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 326/435 (74%), Positives = 368/435 (84%) Query: 33 PPQQLHLNVNILHSGFIPSAWRLPGADPHAFVKASHYVEVARIAEAAKFDAVFLADNAAI 92 PP+QLHLNVNILHSGF+PSAWR ADP AFV +HYV VA+IAEAAKFDAVFLADNA+I Sbjct: 5 PPRQLHLNVNILHSGFVPSAWRTEDADPRAFVDIAHYVRVAKIAEAAKFDAVFLADNASI 64 Query: 93 IEQIDFRPITALEPTVLLAAIAAATTHIGVIGTASTSYNEPYNIARRFASLDHISGGRAG 152 +QIDFRPITALEPTVLLA IA+ATTHIGVIGTASTSYNEPYNIARRFA+LDH+S GRAG Sbjct: 65 ADQIDFRPITALEPTVLLAGIASATTHIGVIGTASTSYNEPYNIARRFATLDHLSAGRAG 124 Query: 153 WNIVTTADLPSARNFGLEQVPDHAARYARADEFTQVVKALWNSWEEDAVVGDAASGRFID 212 WNIVTTADL SARNFG E VP+HA RY RA EFT+VVKALW+SWE+DA +GD A GRF+D Sbjct: 125 WNIVTTADLGSARNFGREAVPNHAERYERAAEFTEVVKALWDSWEDDAFIGDKAGGRFVD 184 Query: 213 DTRVHPIAHRGAHFQVQGPLNLPRTPQGQPVLVQADGSGDGRELAARHAEAVFSAAHTIE 272 +VH I HRG +F V GP NLPR+ QGQPVLVQA GS DGRELA+RHAEAVFSA+ + + Sbjct: 185 PAKVHRIDHRGKYFNVDGPFNLPRSAQGQPVLVQAGGSADGRELASRHAEAVFSASQSFD 244 Query: 273 EARAYRLAIHARAAALGRRPQAVKILPGLATIIGATEAQALQRRDELIDMIPWSYSLKRL 332 EA +Y + +RAAALGR A+++LPGL TIIGATEAQAL+RRDEL+D+IPWSYSL RL Sbjct: 245 EAASYARELKSRAAALGRGDDAIRVLPGLTTIIGATEAQALRRRDELVDLIPWSYSLTRL 304 Query: 333 AGILGVPVASLDLDRPLPDKLALPNGGNGNHTFFQATLSLVRGRTHTVRDVIRALCGGGG 392 AGILGV V L LD LP+ L+LP GGNGNHTFF ATL+ R +T R +IRAL GGGG Sbjct: 305 AGILGVSVDRLKLDGRLPEDLSLPGGGNGNHTFFHATLAQARTNGYTARQLIRALAGGGG 364 Query: 393 HRVLVGTPEQIADEIERWFKAGAADGFNLMPDALPGGLQDFVDGVVPLLQRRGLFRYDYE 452 HRV+VGTPEQIAD+IE WFK GAADGFNLMPD LPGGLQDF DGVVPLLQ+RG+FR DYE Sbjct: 365 HRVIVGTPEQIADDIEHWFKGGAADGFNLMPDVLPGGLQDFADGVVPLLQKRGIFRTDYE 424 Query: 453 GSTLREHLGLPRPLA 467 G TLREH GL RP++ Sbjct: 425 GRTLREHFGLQRPVS 439 >ref|ZP_06839109.1| Luciferase-like, subgroup [Burkholderia sp. Ch1-1] gb|EFG73555.1| Luciferase-like, subgroup [Burkholderia sp. Ch1-1] Length = 451 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 324/435 (74%), Positives = 366/435 (84%) Query: 33 PPQQLHLNVNILHSGFIPSAWRLPGADPHAFVKASHYVEVARIAEAAKFDAVFLADNAAI 92 PP+QLHLNVNILHSGF+PSAWR ADP AFV +HYV VARIAEAAKFDAVFLADNA+I Sbjct: 5 PPRQLHLNVNILHSGFVPSAWRTEDADPRAFVDIAHYVRVARIAEAAKFDAVFLADNASI 64 Query: 93 IEQIDFRPITALEPTVLLAAIAAATTHIGVIGTASTSYNEPYNIARRFASLDHISGGRAG 152 +QIDFRPITALEPTVLLA IA+ATTHIGVIGTASTSYNEPYNIARRFA+LDH+S GRAG Sbjct: 65 ADQIDFRPITALEPTVLLAGIASATTHIGVIGTASTSYNEPYNIARRFATLDHLSAGRAG 124 Query: 153 WNIVTTADLPSARNFGLEQVPDHAARYARADEFTQVVKALWNSWEEDAVVGDAASGRFID 212 WNIVTTADL SARNFG E VP+HA RY RA EFT VVKALW+SWE+DA +GD GRF+D Sbjct: 125 WNIVTTADLGSARNFGREAVPNHAERYERATEFTDVVKALWDSWEDDAFIGDKVGGRFVD 184 Query: 213 DTRVHPIAHRGAHFQVQGPLNLPRTPQGQPVLVQADGSGDGRELAARHAEAVFSAAHTIE 272 +VH I HRG +F V GP NLPR+ QGQPVLVQA GS DGRELA+RHAEAVFSA+ + + Sbjct: 185 PAKVHRIDHRGKYFSVDGPFNLPRSAQGQPVLVQAGGSADGRELASRHAEAVFSASQSFD 244 Query: 273 EARAYRLAIHARAAALGRRPQAVKILPGLATIIGATEAQALQRRDELIDMIPWSYSLKRL 332 EA +Y + +RAAALGR A+++LPGL TIIGATEA+AL+RRDEL+D+IPW+YSL RL Sbjct: 245 EAASYARELKSRAAALGRGDDAIRVLPGLTTIIGATEAEALRRRDELVDLIPWTYSLTRL 304 Query: 333 AGILGVPVASLDLDRPLPDKLALPNGGNGNHTFFQATLSLVRGRTHTVRDVIRALCGGGG 392 AGILGV V L LD LP+ L+LP GGNGNHTFF ATL+ R +T R +IRAL GGGG Sbjct: 305 AGILGVSVDRLKLDERLPEDLSLPGGGNGNHTFFHATLAQARTNGYTARQLIRALAGGGG 364 Query: 393 HRVLVGTPEQIADEIERWFKAGAADGFNLMPDALPGGLQDFVDGVVPLLQRRGLFRYDYE 452 HRV+VGTPEQIAD+IE WFK GAADGFNLMPD LPGGLQDF DGVVPLLQ+RG+FR DYE Sbjct: 365 HRVIVGTPEQIADDIEHWFKGGAADGFNLMPDVLPGGLQDFADGVVPLLQKRGIFRTDYE 424 Query: 453 GSTLREHLGLPRPLA 467 G TLREH GL RP++ Sbjct: 425 GRTLREHFGLQRPVS 439 >ref|ZP_03267621.1| Luciferase-like monooxygenase [Burkholderia sp. H160] gb|EEA00819.1| Luciferase-like monooxygenase [Burkholderia sp. H160] Length = 449 Score = 636 bits (1641), Expect = e-180, Method: Composition-based stats. Identities = 327/441 (74%), Positives = 371/441 (84%), Gaps = 4/441 (0%) Query: 27 MSQPP--KPPQQLHLNVNILHSGFIPSAWRLPGADPHAFVKASHYVEVARIAEAAKFDAV 84 MSQ P P++LHLNVNILHSGF+PSAWRL ADP AF+ HYV VARIAEA K DAV Sbjct: 1 MSQLPVRAAPRRLHLNVNILHSGFVPSAWRLEEADPRAFIDVDHYVHVARIAEAGKLDAV 60 Query: 85 FLADNAAIIEQIDFRPITALEPTVLLAAIAAATTHIGVIGTASTSYNEPYNIARRFASLD 144 FLADNAAI++QIDFRPITALEPTVLLA+IAAATTHIGVIGTASTSYNEPYNIARRFA+LD Sbjct: 61 FLADNAAIVDQIDFRPITALEPTVLLASIAAATTHIGVIGTASTSYNEPYNIARRFATLD 120 Query: 145 HISGGRAGWNIVTTADLPSARNFGLEQVPDHAARYARADEFTQVVKALWNSWEEDAVVGD 204 H+S GRAGWN+VTTADLPSARNFG + VP+HA RY RA EFT+VVKALW+SWE+DA VG+ Sbjct: 121 HVSNGRAGWNVVTTADLPSARNFGRDAVPNHAERYERAAEFTEVVKALWDSWEDDAFVGN 180 Query: 205 AASGRFIDDTRVHPIAHRGAHFQVQGPLNLPRTPQGQPVLVQADGSGDGRELAARHAEAV 264 A GRFID +VHPIAH G F VQGPLNLPR+PQG PV+VQA S DGRELAARHAEAV Sbjct: 181 KAGGRFIDVAKVHPIAHSGRFFHVQGPLNLPRSPQGHPVVVQAGASADGRELAARHAEAV 240 Query: 265 FSAAHTIEEARAYRLAIHARAAALGRRPQAVKILPGLATIIGATEAQALQRRDELIDMIP 324 FSA+ + EE+ AYR ++ RAAA GR AVK+L GL TIIGAT ++AL+RRDEL++ IP Sbjct: 241 FSASQSFEESAAYRRDLNERAAAYGR--PAVKVLAGLTTIIGATHSEALRRRDELVEQIP 298 Query: 325 WSYSLKRLAGILGVPVASLDLDRPLPDKLALPNGGNGNHTFFQATLSLVRGRTHTVRDVI 384 W YSL RLAG LG+ V L LD PLPD LALP GGNGNHTFF AT++ R HTVR++I Sbjct: 299 WRYSLNRLAGTLGIDVERLTLDAPLPDDLALPGGGNGNHTFFHATIAEARRHGHTVRELI 358 Query: 385 RALCGGGGHRVLVGTPEQIADEIERWFKAGAADGFNLMPDALPGGLQDFVDGVVPLLQRR 444 RAL GG GHRV+VGTPEQIAD+I+ WF GAADGFNLMPDALPGGL+DFVDGVVP+LQ+R Sbjct: 359 RALAGGTGHRVIVGTPEQIADDIQHWFDGGAADGFNLMPDALPGGLRDFVDGVVPILQQR 418 Query: 445 GLFRYDYEGSTLREHLGLPRP 465 G+FR +YEG+TLREHLGL RP Sbjct: 419 GIFRSEYEGTTLREHLGLSRP 439 >ref|YP_003609276.1| Luciferase-like, subgroup [Burkholderia sp. CCGE1002] gb|ADG19765.1| Luciferase-like, subgroup [Burkholderia sp. CCGE1002] Length = 449 Score = 630 bits (1626), Expect = e-178, Method: Composition-based stats. Identities = 321/426 (75%), Positives = 363/426 (85%), Gaps = 2/426 (0%) Query: 40 NVNILHSGFIPSAWRLPGADPHAFVKASHYVEVARIAEAAKFDAVFLADNAAIIEQIDFR 99 NVNILHSGF+PSAWRL A+P AFV HYV VARIAEA K DAVFLADNAAI++QIDFR Sbjct: 16 NVNILHSGFVPSAWRLDEAEPRAFVDVDHYVRVARIAEAGKLDAVFLADNAAIVDQIDFR 75 Query: 100 PITALEPTVLLAAIAAATTHIGVIGTASTSYNEPYNIARRFASLDHISGGRAGWNIVTTA 159 PITALEPTVLLA+IAAATTHIGVIGTASTSYNEPYNIARRFA+LDH+S GRAGWN+VTTA Sbjct: 76 PITALEPTVLLASIAAATTHIGVIGTASTSYNEPYNIARRFATLDHVSNGRAGWNVVTTA 135 Query: 160 DLPSARNFGLEQVPDHAARYARADEFTQVVKALWNSWEEDAVVGDAASGRFIDDTRVHPI 219 DLPSARNFG + VP+HA RY RA EFT+VVKALW+SWE+DA VGD A GRF+D +VH I Sbjct: 136 DLPSARNFGRDAVPNHAQRYERAAEFTEVVKALWDSWEDDAFVGDKAGGRFVDVAKVHAI 195 Query: 220 AHRGAHFQVQGPLNLPRTPQGQPVLVQADGSGDGRELAARHAEAVFSAAHTIEEARAYRL 279 AHRG +F VQGPLN+PR+PQG PV+VQA S DGRELAARHAEAVFSA+ + EE+ AYR Sbjct: 196 AHRGRYFDVQGPLNVPRSPQGHPVVVQAGASADGRELAARHAEAVFSASQSFEESAAYRR 255 Query: 280 AIHARAAALGRRPQAVKILPGLATIIGATEAQALQRRDELIDMIPWSYSLKRLAGILGVP 339 ++ RAAA GR P VK+L GL TIIGAT ++AL+RRDEL++ IPW YSL RLAG LG+ Sbjct: 256 DLNERAAAYGRPP--VKVLAGLTTIIGATHSEALRRRDELVEQIPWRYSLNRLAGTLGID 313 Query: 340 VASLDLDRPLPDKLALPNGGNGNHTFFQATLSLVRGRTHTVRDVIRALCGGGGHRVLVGT 399 V L LD PLPD LALP GGNGNHTFF ATL+ R HTVR++IRAL GG GHRV+VGT Sbjct: 314 VERLTLDAPLPDDLALPGGGNGNHTFFHATLAEARRHGHTVRELIRALAGGTGHRVIVGT 373 Query: 400 PEQIADEIERWFKAGAADGFNLMPDALPGGLQDFVDGVVPLLQRRGLFRYDYEGSTLREH 459 PEQIAD+IERWF GAADGFNLMPDALPGGL+DFVDGVVP+LQ+RG+FR +YEG+TLREH Sbjct: 374 PEQIADDIERWFDGGAADGFNLMPDALPGGLRDFVDGVVPILQQRGIFRSEYEGTTLREH 433 Query: 460 LGLPRP 465 LGL RP Sbjct: 434 LGLDRP 439 >ref|YP_555435.1| putative monooxygenase [Burkholderia xenovorans LB400] gb|ABE36085.1| Putative monooxygenase [Burkholderia xenovorans LB400] Length = 469 Score = 630 bits (1625), Expect = e-178, Method: Composition-based stats. Identities = 334/447 (74%), Positives = 383/447 (85%), Gaps = 2/447 (0%) Query: 33 PPQQLHLNVNILHSGFIPSAWRLPGADPHAFVKASHYVEVARIAEAAKFDAVFLADNAAI 92 PP++LHLNVNILHSGF+PSAWRLP ADP AF+ +HY+ VA+IAEAAKFDAVFLADNA+I Sbjct: 23 PPRRLHLNVNILHSGFVPSAWRLPDADPRAFIDVAHYIRVAQIAEAAKFDAVFLADNASI 82 Query: 93 IEQIDFRPITALEPTVLLAAIAAATTHIGVIGTASTSYNEPYNIARRFASLDHISGGRAG 152 +QIDFRPITALEPTVLLA+IAAATT IGVIGTASTSYNEPYNIARRF++LDH+SGGRAG Sbjct: 83 ADQIDFRPITALEPTVLLASIAAATTRIGVIGTASTSYNEPYNIARRFSTLDHVSGGRAG 142 Query: 153 WNIVTTADLPSARNFGLEQVPDHAARYARADEFTQVVKALWNSWEEDAVVGDAASGRFID 212 WNIVTTADL SARNFG E VP HA RYARA EFT+VVK LW+SWE+DA+VGD GRFID Sbjct: 143 WNIVTTADLGSARNFGRETVPVHAERYARAAEFTEVVKKLWDSWEDDALVGDKTRGRFID 202 Query: 213 DTRVHPIAHRGAHFQVQGPLNLPRTPQGQPVLVQADGSGDGRELAARHAEAVFSAAHTIE 272 T+V P++H G +F V GPLNLPR+PQG PVLVQA GS DGRELAARHA+AVFSAA + + Sbjct: 203 TTKVRPVSHHGKYFDVAGPLNLPRSPQGHPVLVQAGGSADGRELAARHAQAVFSAAQSFD 262 Query: 273 EARAYRLAIHARAAALGRRPQAVKILPGLATIIGATEAQALQRRDELIDMIPWSYSLKRL 332 E+ AY + ARAAALGR P A++ILPGL TIIG+TE +AL+RRDEL+D+IPWSYSL RL Sbjct: 263 ESAAYGRDLKARAAALGRGPDAIRILPGLTTIIGSTETEALRRRDELVDLIPWSYSLTRL 322 Query: 333 AGILGVPVASLDLDRPLPDKLALPNGGNGNHTFFQATLSLVRGRTHTVRDVIRALCGGGG 392 AGILG+PV L+LD+ LPD L LP GGNGNHTFF ATL+ R +T R +IRAL GGGG Sbjct: 323 AGILGLPVERLELDQRLPDDLPLPGGGNGNHTFFNATLAQARNHGYTARQLIRALAGGGG 382 Query: 393 HRVLVGTPEQIADEIERWFKAGAADGFNLMPDALPGGLQDFVDGVVPLLQRRGLFRYDYE 452 HRV+VGTPEQIAD+IERWF GAADGFNLMPDALP GL+ FVDGVVP+L+RRGLFR DYE Sbjct: 383 HRVVVGTPEQIADDIERWFVGGAADGFNLMPDALPDGLKQFVDGVVPILRRRGLFRTDYE 442 Query: 453 GSTLREHLGLPRPLAS--AGGEQTVRA 477 GSTLR+HLGLPRP+++ AG E V A Sbjct: 443 GSTLRDHLGLPRPVSAHPAGQEAAVTA 469