BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4569.p (276 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001401137.1| pili assembly chaperone [Yersinia pseudotube... 188 1e-45 ref|YP_070437.1| pili assembly chaperone [Yersinia pseudotubercu... 187 1e-45 ref|ZP_04630196.1| Gram-negative pili assembly chaperone [Yersin... 183 3e-44 ref|YP_004297848.1| pili assembly chaperone [Yersinia enterocoli... 182 5e-44 ref|ZP_04639200.1| Gram-negative pili assembly chaperone [Yersin... 182 6e-44 >ref|YP_001401137.1| pili assembly chaperone [Yersinia pseudotuberculosis IP 31758] gb|ABS48833.1| gram-negative pili assembly chaperone [Yersinia pseudotuberculosis IP 31758] Length = 243 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 99/232 (42%), Positives = 143/232 (61%), Gaps = 4/232 (1%) Query: 43 MLLVFLLSAHASASVTMLGTRVIYPADAGEQVLRFSNPDDHPNLVQLWLDDGH-AGRPDG 101 MLL+ +S ASV M GTR+IYP + E+VL+ SN DDHPNLVQLW+DDG+ P Sbjct: 13 MLLLTSVSLSVQASVVMTGTRIIYPEGSREKVLQLSNKDDHPNLVQLWMDDGNNQSSPSK 72 Query: 102 QASPFLVIPPVFRIEPHGGQVVRLSYIGAALPQDRESLFFLNFLQVPALKADSVNDNQLV 161 PF + P +FR+E + GQVVRL+YI LP++RES+F+LNFLQ+PALKAD+ DN+LV Sbjct: 73 SDVPFALTPQIFRMEANSGQVVRLTYIAHNLPKNRESVFYLNFLQIPALKADTQPDNKLV 132 Query: 162 LTVRSRMKVFYRPPALASEADAARAPAALSFAIDSSDGMASMVVRNGSGYHLMVQQADLV 221 L V +R+KVF+RP AL D +S +D++ G + V N +GY++ ++ A +V Sbjct: 133 LIVNNRLKVFFRPAALKENIDT--LGEKISVTLDTTTG-NKIKVHNPTGYYISLRDAKIV 189 Query: 222 LGGQAQALARTTVIQPFQELRWPLDHVPADRAGMRMRLRLLNDVGVEVPRDY 273 G+ + A + + P L + G + L ++ND G +P +Y Sbjct: 190 SNGKTVSFATSEMFAPDSTTDLALPIGIKAKKGELLILNVVNDYGATIPNNY 241 >ref|YP_070437.1| pili assembly chaperone [Yersinia pseudotuberculosis IP 32953] ref|YP_001721003.1| pili assembly chaperone [Yersinia pseudotuberculosis YPIII] ref|YP_001872392.1| Pili assembly chaperone, N-terminal [Yersinia pseudotuberculosis PB1/+] emb|CAH21158.1| probable pili assembly chaperone [Yersinia pseudotuberculosis IP 32953] gb|ACA68550.1| pili assembly chaperone [Yersinia pseudotuberculosis YPIII] gb|ACC88935.1| Pili assembly chaperone, N-terminal [Yersinia pseudotuberculosis PB1/+] Length = 243 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 99/232 (42%), Positives = 143/232 (61%), Gaps = 4/232 (1%) Query: 43 MLLVFLLSAHASASVTMLGTRVIYPADAGEQVLRFSNPDDHPNLVQLWLDDGH-AGRPDG 101 MLL+ +S ASV M GTR+IYP + E+VL+ SN DDHPNLVQLW+DDG+ P Sbjct: 13 MLLLTSVSLSVQASVVMTGTRIIYPEGSREKVLQLSNKDDHPNLVQLWMDDGNNQSSPSK 72 Query: 102 QASPFLVIPPVFRIEPHGGQVVRLSYIGAALPQDRESLFFLNFLQVPALKADSVNDNQLV 161 PF + P +FR+E + GQVVRL+YI LP++RES+F+LNFLQ+PALKAD+ DN+LV Sbjct: 73 SDVPFALTPQIFRMEANSGQVVRLTYIARNLPKNRESVFYLNFLQIPALKADTQPDNKLV 132 Query: 162 LTVRSRMKVFYRPPALASEADAARAPAALSFAIDSSDGMASMVVRNGSGYHLMVQQADLV 221 L V +R+KVF+RP AL D +S +D++ G + V N +GY++ ++ A +V Sbjct: 133 LIVNNRLKVFFRPAALKENIDT--LGEKISVTLDTTTG-NKIKVHNPTGYYISLRDAKIV 189 Query: 222 LGGQAQALARTTVIQPFQELRWPLDHVPADRAGMRMRLRLLNDVGVEVPRDY 273 G+ + A + + P L + G + L ++ND G +P +Y Sbjct: 190 SNGKTVSFATSEMFAPDSTTDLALPIGIKAKKGELLILNVVNDYGATIPNNY 241 >ref|ZP_04630196.1| Gram-negative pili assembly chaperone [Yersinia bercovieri ATCC 43970] gb|EEQ04909.1| Gram-negative pili assembly chaperone [Yersinia bercovieri ATCC 43970] Length = 243 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 96/232 (41%), Positives = 139/232 (59%), Gaps = 4/232 (1%) Query: 43 MLLVFLLSAHASASVTMLGTRVIYPADAGEQVLRFSNPDDHPNLVQLWLDDGH-AGRPDG 101 +LL+ + ASV M GTR+IYP E+VL+ SN DD+PNLVQLW+DDG+ P Sbjct: 13 LLLLSGVPLWTKASVVMTGTRIIYPEGTREKVLQLSNKDDYPNLVQLWMDDGNNQSSPSK 72 Query: 102 QASPFLVIPPVFRIEPHGGQVVRLSYIGAALPQDRESLFFLNFLQVPALKADSVNDNQLV 161 PF + P +FR+EP GQV+RL+YI LP+DRES+F+LNFLQ+PALKAD+ ++N+LV Sbjct: 73 SDVPFTLTPQIFRMEPQSGQVIRLAYIERNLPKDRESVFYLNFLQIPALKADNQSENKLV 132 Query: 162 LTVRSRMKVFYRPPALASEADAARAPAALSFAIDSSDGMASMVVRNGSGYHLMVQQADLV 221 L V +R+KVFYRP AL D + +DS G + + N +GY++ ++ A LV Sbjct: 133 LIVNNRLKVFYRPAALKENVDT--LGEKIQVTLDSVAG-DKIKIHNPTGYYISLRDAKLV 189 Query: 222 LGGQAQALARTTVIQPFQELRWPLDHVPADRAGMRMRLRLLNDVGVEVPRDY 273 G+ + A + + P + G + L ++ND G +P +Y Sbjct: 190 SDGKTISFATSEMFAPNSTTDLAFPAGVKGKKGELLTLNVVNDYGTNIPCNY 241 >ref|YP_004297848.1| pili assembly chaperone [Yersinia enterocolitica subsp. palearctica 105.5R(r)] emb|CBY26665.1| putative pili assembly chaperone precursor [Yersinia enterocolitica subsp. palearctica Y11] gb|ADZ42145.1| pili assembly chaperone [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 244 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 100/233 (42%), Positives = 141/233 (60%), Gaps = 5/233 (2%) Query: 43 MLLVFLLSAHASASVTMLGTRVIYPADAGEQVLRFSNPDDHPNLVQLWLDDGH-AGRPDG 101 +LL+ + ASV M GTR+IYP E+VL+ SN DDHPNLVQLW+DDG+ P Sbjct: 13 LLLLSGVPLWTQASVVMTGTRIIYPEGTREKVLQLSNKDDHPNLVQLWMDDGNNQSSPSK 72 Query: 102 QASPFLVIPPVFRIEPHGGQVVRLSYIGAALPQDRESLFFLNFLQVPAL-KADSVNDNQL 160 PF + P +FR+E GQVVRLSYI LP+DRES+F+LNFLQ+PAL KAD+ +N+L Sbjct: 73 SDVPFTLTPQIFRMEAKSGQVVRLSYIERNLPKDRESVFYLNFLQIPALKKADTQPENKL 132 Query: 161 VLTVRSRMKVFYRPPALASEADAARAPAALSFAIDSSDGMASMVVRNGSGYHLMVQQADL 220 VL V +R+KVFYRP AL D A ++ ++SS+G + + N + Y++ ++ A L Sbjct: 133 VLIVNNRLKVFYRPAALKENVDTLGAKVHVT--LESSNG-DKIKIHNPTAYYISLRDAKL 189 Query: 221 VLGGQAQALARTTVIQPFQELRWPLDHVPADRAGMRMRLRLLNDVGVEVPRDY 273 V G+ + A + + P L + G + L ++ND G +P DY Sbjct: 190 VSDGKTISFATSEMFAPNSTTDLALPAGVKAKKGELLTLNVVNDYGTNIPCDY 242 >ref|ZP_04639200.1| Gram-negative pili assembly chaperone [Yersinia mollaretii ATCC 43969] gb|EEQ12214.1| Gram-negative pili assembly chaperone [Yersinia mollaretii ATCC 43969] Length = 243 Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 97/232 (41%), Positives = 136/232 (58%), Gaps = 4/232 (1%) Query: 43 MLLVFLLSAHASASVTMLGTRVIYPADAGEQVLRFSNPDDHPNLVQLWLDDGH-AGRPDG 101 +LL+ + ASV M GTR+IY E+VL+ SN DDHPNLVQLW+DDG+ P Sbjct: 13 LLLLSGVPLWTQASVVMTGTRIIYLEGTREKVLQLSNKDDHPNLVQLWMDDGNNQSSPSK 72 Query: 102 QASPFLVIPPVFRIEPHGGQVVRLSYIGAALPQDRESLFFLNFLQVPALKADSVNDNQLV 161 PF + P +FR+EP GQVVRLSY+ LP+DRES+F+LNFLQ+PALKAD +N+LV Sbjct: 73 SDVPFTLTPQIFRMEPQSGQVVRLSYLERNLPKDRESVFYLNFLQIPALKADKQTENKLV 132 Query: 162 LTVRSRMKVFYRPPALASEADAARAPAALSFAIDSSDGMASMVVRNGSGYHLMVQQADLV 221 L V +R+KVFYRP AL D + +DS G + + N +GY + ++ A L+ Sbjct: 133 LIVNNRLKVFYRPAALKENVDT--LGEKIQVTLDSVTG-DKIKIHNPTGYFISLRDAKLI 189 Query: 222 LGGQAQALARTTVIQPFQELRWPLDHVPADRAGMRMRLRLLNDVGVEVPRDY 273 G + + A + + P L + G + L ++ND G +P +Y Sbjct: 190 NGDKTISFATSEMFAPNSTTDLALPAGVKAKKGELLTLNVVNDYGTNIPCNY 241