BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4568.p (1247 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBA71748.1| fimbrial usher protein [Arsenophonus nasoniae] 669 0.0 gb|EGX10205.1| fimbrial Usher family protein [Escherichia coli S... 641 0.0 ref|YP_002440786.1| usher CupA3 [Pseudomonas aeruginosa LESB58] ... 626 e-177 ref|ZP_07796878.1| usher CupA3 [Pseudomonas aeruginosa 39016] >g... 625 e-176 dbj|GAA17682.1| usher CupA3 [Pseudomonas aeruginosa NCMG1179] 625 e-176 >emb|CBA71748.1| fimbrial usher protein [Arsenophonus nasoniae] Length = 852 Score = 669 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 350/839 (41%), Positives = 516/839 (61%), Gaps = 25/839 (2%) Query: 56 LLAWPVAVAGPAENSYRFLESLEMASPINKGSLSRFNRVGNVEPGIYSVDVFVNGSYSHR 115 LL + ++ +Y F +L ++ L++FN+ ++ PG Y VD+++N + Sbjct: 24 LLTFIPSLVYSTNETYTFDPTLFRGGAVSPTMLAQFNQANSIIPGKYKVDIYINNHFFQS 83 Query: 116 RALRFDLVEGMGAAACFKAEDAVLLDLRQDLVAQLGQRECARIDELAAGAQAVLDLSNLR 175 + + F + CF E D+ ++ + C + E AG++ L LS+LR Sbjct: 84 KEITFIENKNHTVGPCFNLETIKQADIIVKSTNKISDQNCIFLPEYIAGSRVKLTLSDLR 143 Query: 176 INVSIPQSQLKHVARGYIDPELYDAGDSMGFLNYSISQYYAHTAQ--ASSSSVYGFTNSG 233 ++++IP L+++ RGYIDP L DAG S+ FLNY + Y+ + + Y N Sbjct: 144 LDLTIPDDGLQNIPRGYIDPNLLDAGSSILFLNYIGNYYHINNDNNVKDQDTAYLSFNGD 203 Query: 234 VNLGLWRLRQQGSLGYDSRSGLRWNPVRTYARRALPDWTSELTVGQSYTSGKLLSGLAYQ 293 +N G+W+ RQQ + Y +SG +WN +R+Y +R LP T L++GQ T GK SGL + Sbjct: 204 MNFGIWQYRQQSNYTYSRQSGAKWNNIRSYLQRPLPVITGMLSLGQLVTQGKFFSGLNFN 263 Query: 294 GLELSSDERMLPDSQRGYAPVIRGTARSNAQVIVSQKGRDIYRTTVAPGSFVIDDLYPTS 353 GL L+SDER LPDS RGYAPV++G A + A V + Q G IY+ TV+PG+F I DLYPTS Sbjct: 264 GLALASDERTLPDSLRGYAPVVQGVANTTATVTIKQNGNQIYQKTVSPGAFSITDLYPTS 323 Query: 354 YNGDLDVTVIEADGTRSRFSVPYSALPESMRPGSERYSVTLGRTRDTDSSLPFVDALYQR 413 YNGDLDV + EADG+ RFSVP+SA+PES+RPGS RY+ ++GRTR+ F DA+YQ Sbjct: 324 YNGDLDVEISEADGSVRRFSVPFSAVPESLRPGSYRYNFSVGRTRNIGQDSVFADAIYQY 383 Query: 414 GLSNSMTGSLGLRLAPAYQSAVLGTTLAGPAGSLGLSLNYSHA----DTGGGARG----G 465 GLSNS + S GLR+A YQ+ +LG G+LG + YS++ D R G Sbjct: 384 GLSNSFSVSSGLRIADKYQAIMLGGVYGSRFGALGFNTTYSNSVVLIDHQSADRSERLQG 443 Query: 466 WMMGVSYSRAFDVTGTQFSIASYRYSTSGYRELADVISERQVRRTGFSSLASSTSYQQHS 525 WM +SYSR F++T T S+A YRYST GYREL+DV+ R+ G + SS++Y+Q + Sbjct: 444 WMANLSYSRTFNITNTTISLAGYRYSTDGYRELSDVLGIREAITRG--TPWSSSTYRQLN 501 Query: 526 RIDLSLSQQLGSLGSLYLSGLTQTFHHDRSRITQLQFGYSTLWRNGVSLNLAFQRQQVSN 585 R++L+LSQQLG G+L+LSG Q + +R R +QLQ GY+ + NG+++N+ RQQ++ Sbjct: 502 RLELTLSQQLGEFGNLFLSGSIQNYRDNRPRDSQLQLGYNKAFDNGLTMNVVVARQQLAE 561 Query: 586 VARTANDLDGRLAAVAQPGSSLMLSLSIPLGRE-GGERPVASTSVVRAAD-QDLYQTQVS 643 + + + +S +S S PLG + P S+S + D YQ +S Sbjct: 562 SSEHS----------GKEETSTSVSFSFPLGSQYSSYTPTVSSSYTHGGNIGDQYQVMLS 611 Query: 644 GMLAGERHLSYSVGASHVPGGQQDSVNGNLGARLPKANLNLNLTHGRDYWQVAGNVRGAL 703 G +++L+YSVGAS+V Q +VNG+L R NL++N + G++YWQ+ N +GAL Sbjct: 612 GTANEQQNLNYSVGASYVRQYNQSTVNGSLQKRFSNTNLSINASKGKNYWQIGANAQGAL 671 Query: 704 AVHAGGITLGPYLGDTFALIEAKGAEGARLFNGQGAVIDSHGYALLPSLSPYHRNVVELA 763 A+H+GG+T GPYLGDTFAL+EAKGA GA + N QG +ID +GYAL+PS++PY N + L Sbjct: 672 ALHSGGLTFGPYLGDTFALVEAKGASGAAVLNAQGTIIDDNGYALVPSITPYRYNKIILD 731 Query: 764 ASGKRHKTELLESQRTVIPYAGATLKLSFRTRTGHALLIRLHRENGEPLPMGADVLDEQG 823 G EL E+++ V PYAGA +K+ F+TR G+ALLI+ + LP+G +V D++ Sbjct: 732 PQGMAENFELNENEKQVAPYAGAAVKVMFKTRAGYALLIKAQLADHSLLPIGREVFDQEN 791 Query: 824 EMVGMVGQGSQAYLRSDRVRAKLLVRWGDGQQERCAAQYDLQGQDLS-SPLLRLTANCI 881 ++GMVGQ +Q Y+R+++ LL++WG+ ERC Y GQ L+ P+ +LTA C+ Sbjct: 792 NVIGMVGQNNQMYVRTEQASGTLLLKWGETISERCYLDYSRTGQALAKQPITKLTAMCV 850 >gb|EGX10205.1| fimbrial Usher family protein [Escherichia coli STEC_MHI813] Length = 840 Score = 641 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 364/853 (42%), Positives = 525/853 (61%), Gaps = 36/853 (4%) Query: 47 RSVLSLGAG---LLAWPV-----AVAGPA-ENSYRFLESLEMASPINKGSLSRFNRVGNV 97 +SV+S+ A LL PV + A P+ E++Y F L S ++ SL++ +V Sbjct: 3 KSVVSISAAILVLLCQPVMGKEISPATPSDEDNYTFDPQLFRGSRFSQSSLAKLTTRESV 62 Query: 98 EPGIYSVDVFVNGSYSHRRALRFDLVEGMGAAACFKAE--DAVLLDLRQDLVAQLGQRE- 154 PG Y +D++ N S + F C E DA+ L +D G+++ Sbjct: 63 APGNYKMDIYTNNKLSGSWNVTFKEAADGRVLPCLTPEVADAIGLKTGEDK----GEKDP 118 Query: 155 -CARIDELAAGAQAVLDLSNLRINVSIPQSQLKHVARGYIDPELYDAGDSMGFLNYSISQ 213 C ELA G + LS LR+++S+PQSQ+ RGY+ P D G S+ F+NY I+ Sbjct: 119 VCTFAQELAPGITSQTQLSQLRLDLSVPQSQMISRPRGYVPPSELDTGASLAFMNY-IAN 177 Query: 214 YY--AHTAQASSS--SVYGFTNSGVNLGLWRLRQQGSLGYDSRSGLRWNPVRTYARRALP 269 YY A++ Q + S S++ N G+NLG W+ RQ ++ +D+ G +WN +R+Y +R LP Sbjct: 178 YYNVAYSGQNAHSQRSLWASFNGGINLGAWQYRQLSNMTWDNDKGNQWNNIRSYLQRPLP 237 Query: 270 DWTSELTVGQSYTSGKLLSGLAYQGLELSSDERMLPDSQRGYAPVIRGTARSNAQVIVSQ 329 S+L +GQ TSG+ SGL+Y G+ L++DERMLPDS RGYAP IRG A +NA+V V Q Sbjct: 238 AINSQLMMGQLITSGRFFSGLSYHGVSLATDERMLPDSMRGYAPTIRGVAATNARVSVMQ 297 Query: 330 KGRDIYRTTVAPGSFVIDDLYPTSYNGDLDVTVIEADGTRSRFSVPYSALPESMRPGSER 389 G +IY+TTVAPG F I+DLYPTSY+GDLDVTV EA+GT SRFSVP+SA+PESMRPG+ R Sbjct: 298 NGHEIYQTTVAPGPFEINDLYPTSYSGDLDVTVTEANGTVSRFSVPFSAVPESMRPGTSR 357 Query: 390 YSVTLGRTRDTDSSLPFVDALYQRGLSNSMTGSLGLRLAPAYQSAVLGTTLAGPAGSLGL 449 Y+V +G+T+D+ F D +Q G++N++T + G R+A YQ+ +LG G+ G Sbjct: 358 YNVEVGKTQDSGDDSMFGDLTWQHGMTNTLTFNSGSRIADGYQALMLGGVYGSTLGAFGA 417 Query: 450 SLNYSHADT-GGGARGGWMMGVSYSRAFDVTGTQFSIASYRYSTSGYRELADVISERQVR 508 +L +SHA A+ GWM +++S+ F T T S+A YRYSTSGYR+LADV+ ER Sbjct: 418 NLTWSHARVPESEAQSGWMSQLTWSKTFQPTSTTVSLAGYRYSTSGYRDLADVLGERHAA 477 Query: 509 RTGFSSLASSTSYQQHSRIDLSLSQQLGSLGSLYLSGLTQTFHHDRSRITQLQFGYSTLW 568 S S+ ++Q SR DL+LSQ L + G+L++SG TQ + +SR TQLQ GYS + Sbjct: 478 SNKQS--WDSSQWRQQSRFDLTLSQSLANYGNLFVSGSTQNYRGGKSRDTQLQLGYSNSF 535 Query: 569 RNGVSLNLAFQRQQVSNVARTANDLDGRLAAVAQPGSSLMLSLSIPLGREGGERPVASTS 628 +G+S+NL+ RQ++ +ND+ + LS S PLG G P S S Sbjct: 536 SHGISMNLSVGRQRMGGYKDNSNDMQ----------TVTSLSFSFPLGGNGPRVPSLSNS 585 Query: 629 VVRAAD-QDLYQTQVSGMLAGERHLSYSVGASHVPGGQQDSVNGNLGARLPKANLNLNLT 687 + D Q+ ++GML + +YS+ +Q +++GN+ R + + LN + Sbjct: 586 WTHSTDGSSQLQSSLTGMLDEAQTTNYSLNVMRDQQYKQTTLSGNMQKRFSQTTVGLNAS 645 Query: 688 HGRDYWQVAGNVRGALAVHAGGITLGPYLGDTFALIEAKGAEGARLFNGQGAVIDSHGYA 747 G+DYWQ +GNV+GA+AVH GG+T GPYLG+TFAL+EAKGAEGA+++N I+ GYA Sbjct: 646 KGQDYWQASGNVQGAMAVHGGGVTFGPYLGETFALVEAKGAEGAKVYNSSQLEINDSGYA 705 Query: 748 LLPSLSPYHRNVVELAASGKRHKTELLESQRTVIPYAGATLKLSFRTRTGHALLIRLHRE 807 L+P+++PY N + L G EL++S++ V P AGA +K+ FRTR G ALLI+ Sbjct: 706 LVPAVTPYRYNRISLDPQGMDSDAELVDSEKQVAPVAGAAVKVVFRTRPGKALLIKSRMA 765 Query: 808 NGEPLPMGADVLDEQGEMVGMVGQGSQAYLRSDRVRAKLLVRWGDGQQERCAAQYDLQGQ 867 +G LPMGADVLDE +VG+ GQG Q YLR+++ + L VRWG+G + C +D+ G+ Sbjct: 766 DGSELPMGADVLDENNTVVGIAGQGGQIYLRTEQTKGHLSVRWGEGANDSCQLPFDISGK 825 Query: 868 DLSSPLLRLTANC 880 D +SP++RL C Sbjct: 826 DSNSPIIRLNETC 838 >ref|YP_002440786.1| usher CupA3 [Pseudomonas aeruginosa LESB58] emb|CAW27924.1| usher CupA3 [Pseudomonas aeruginosa LESB58] Length = 872 Score = 626 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 390/868 (44%), Positives = 519/868 (59%), Gaps = 30/868 (3%) Query: 44 RVARSVLSLGAGLLAWPVAVAGPAENSYRFLESLEMASPINKGSLSRFNRVGNVEPGIYS 103 R R+ +L AG +A + G A+ Y F + L + S + G LSRFN+ G ++PG Y Sbjct: 7 RRCRTGTALMAGGMALAASAFGHAQPGYEFDDRLLLGSSLGGGDLSRFNQDGRIDPGRYH 66 Query: 104 VDVFVNGSYSHRRALRFDLVEGMGAAACFKAEDAVLLDLRQDLVAQLGQ--------REC 155 VDV++N ++ R + F GA ED LRQ L A+ G R C Sbjct: 67 VDVYLNERFASRSEVSFRANPASGAVEPCLDEDF----LRQRLGAKPGDDPRKSGDGRHC 122 Query: 156 ARIDELAAGAQAVLDLSNLRINVSIPQSQLKHVARGYIDPELYDAGDSMGFLNYSISQY- 214 A +D G++ LD++ LR+++S+PQ+ L RGY+ PE +DAGDSMGF+NY + Y Sbjct: 123 AFLDARLPGSRFSLDVARLRLDLSVPQALLDLKPRGYVSPEEWDAGDSMGFVNYDTNLYR 182 Query: 215 --YAHTAQASSSSVYGFTNSGVNLGLWRLRQQGSLGYDSRSGL---RWNPVRTYARRALP 269 Y S Y NSG+NLGLWRLR Q + Y +G +WN +RTYA+RALP Sbjct: 183 SEYRGGESGRSDYAYVGLNSGINLGLWRLRHQSNYTYSRYNGQARRKWNSIRTYAQRALP 242 Query: 270 DWTSELTVGQSYTSGKLLSGLAYQGLELSSDERMLPDSQRGYAPVIRGTARSNAQVIVSQ 329 W SELT G+SYT+G LL + Y+GL L++D+RMLP+S R YAP +RGTA + A+V++SQ Sbjct: 243 AWRSELTAGESYTAGNLLGSIGYRGLSLATDDRMLPESLRRYAPQVRGTAATAARVVISQ 302 Query: 330 KGRDIYRTTVAPGSFVIDDLYPTSYNGDLDVTVIEADGTRSRFSVPYSALPESMRPGSER 389 GR I VAPG FVIDDLY ++Y GDLDV V EADG+ S FSVP++++PESMRPG R Sbjct: 303 NGRKIREVNVAPGPFVIDDLYDSAYAGDLDVQVFEADGSVSSFSVPFASVPESMRPGLSR 362 Query: 390 YSVTLGRTRD-TDSSLPFVDALYQRGLSNSMTGSLGLRLAPAYQSAVLGTTLAGPAGSLG 448 YS TLG+ R D F D YQRG+SN++T +LGLR+A Y + + G LA G+ G Sbjct: 363 YSFTLGQARQYGDGDDLFADFTYQRGMSNALTANLGLRVADDYLAMLGGGVLATRFGAFG 422 Query: 449 LSLNYSHADTGGGARG-GWMMGVSYSRAFDVTGTQFSIASYRYSTSGYRELADVISERQV 507 L+ YS A GAR GW +G+ YSR F TGT ++A YRYST GYREL DV+ R Sbjct: 423 LNSTYSSARVEDGARKQGWRIGLDYSRTFQPTGTTLTLAGYRYSTEGYRELGDVLGSRDA 482 Query: 508 RRTGFSSLASSTSYQQHSRIDLSLSQQLGSLGSLYLSGLTQTFHHDRSRITQLQFGYSTL 567 R G S SY+Q ++ +L +SQ LG G+LYLSG + F+ +SR TQLQFGYS Sbjct: 483 LRHG--DTWDSGSYKQRNQFNLLVSQALGGYGNLYLSGSSSDFYDGKSRDTQLQFGYSNT 540 Query: 568 WRNGVSLNLAFQRQQVSNVARTANDLDG-----RLAAVAQPGSSLMLSLSIPLGREGGER 622 W +S NLA+ RQ + + G R Q +L LS+S+PLG Sbjct: 541 W-GQLSYNLAWSRQTTTYYQEQGDQDPGVELLRRDRRSGQRNDTLTLSVSMPLGSSSRAP 599 Query: 623 PVASTSVVRAADQ--DLYQTQVSGMLAGERHLSYSVGASHVPGGQQDSVNGNLGARLPKA 680 +++ + R+ D QT ++G L ER SY++ A+ + NG L + A Sbjct: 600 TLSAMATRRSGDSRGGSLQTGLNGTLGDERTWSYALSANRDSEVADTTWNGTLQKQAALA 659 Query: 681 NLNLNLTHGRDYWQVAGNVRGALAVHAGGITLGPYLGDTFALIEAKGAEGARLFNGQGAV 740 +N G Y Q +G +RGAL H G+TLGP +GDTFAL+EAKGA GA + GQGA Sbjct: 660 TVNAGYAQGDRYRQYSGGIRGALVAHRDGLTLGPSVGDTFALVEAKGASGAAIRGGQGAR 719 Query: 741 IDSHGYALLPSLSPYHRNVVELAASGKRHKTELLESQRTVIPYAGATLKLSFRTRTGHAL 800 ID +GYAL PSLSPY N + L G ELLE++R V PYAGA+++++FRT TGH L Sbjct: 720 IDGNGYALAPSLSPYRYNPISLDPVGIDPDAELLETERKVAPYAGASVRVTFRTLTGHPL 779 Query: 801 LIRLHRENGEPLPMGADVLDEQGEMVGMVGQGSQAYLRSDRVRAKLLVRWGDGQQERCAA 860 LI+ RE+G LP+GA V+D+ G +GMVGQG Q Y R++ R +LLV+WG ++ERC Sbjct: 780 LIQARREDGSVLPLGAVVVDDGGAAIGMVGQGGQVYARAENQRGRLLVQWGTARKERCEL 839 Query: 861 QYDLQGQDLSSPLLRLTANCIAAPRHGN 888 YDL G L+RL C AA N Sbjct: 840 PYDLAGVSRDQALIRLRGTCRAATTDSN 867 >ref|ZP_07796878.1| usher CupA3 [Pseudomonas aeruginosa 39016] gb|EFQ41974.1| usher CupA3 [Pseudomonas aeruginosa 39016] gb|EGM20644.1| usher CupA3 [Pseudomonas aeruginosa 152504] dbj|BAK89956.1| usher [Pseudomonas aeruginosa NCGM2.S1] Length = 872 Score = 625 bits (1613), Expect = e-176, Method: Composition-based stats. Identities = 389/868 (44%), Positives = 520/868 (59%), Gaps = 30/868 (3%) Query: 44 RVARSVLSLGAGLLAWPVAVAGPAENSYRFLESLEMASPINKGSLSRFNRVGNVEPGIYS 103 R R+ +L AG +A + G A+ Y F + L + S + G LSRFN+ G ++PG Y Sbjct: 7 RRCRTGTALMAGGMALAASAFGHAQPGYEFDDRLLLGSSLGGGDLSRFNQDGRIDPGRYH 66 Query: 104 VDVFVNGSYSHRRALRFDLVEGMGAAACFKAEDAVLLDLRQDLVAQLGQR--------EC 155 VDV++N ++ R + F GA ED LRQ L A+ G++ C Sbjct: 67 VDVYLNERFASRSEVSFRANPASGAVEPCLEEDF----LRQRLGAKPGEKPRKSDEGAHC 122 Query: 156 ARIDELAAGAQAVLDLSNLRINVSIPQSQLKHVARGYIDPELYDAGDSMGFLNYSISQY- 214 A +D G++ LD++ LR+++S+PQ+ L RGY+ PE +DAGDSMGF+NY + Y Sbjct: 123 AFLDTRLPGSRFSLDVARLRLDLSVPQALLDLKPRGYVSPEEWDAGDSMGFVNYDTNLYR 182 Query: 215 --YAHTAQASSSSVYGFTNSGVNLGLWRLRQQGSLGYDSRSGL---RWNPVRTYARRALP 269 Y S Y NSG+NLGLWRLR Q + Y +G +WN +RTYA+RALP Sbjct: 183 SDYRGGESGRSDYAYVGLNSGINLGLWRLRHQSNYTYSRYNGQARRKWNGIRTYAQRALP 242 Query: 270 DWTSELTVGQSYTSGKLLSGLAYQGLELSSDERMLPDSQRGYAPVIRGTARSNAQVIVSQ 329 W SELT G+SYT+G LL + Y+GL L++D+RMLP+S R YAP +RGTA + A+V++SQ Sbjct: 243 AWRSELTAGESYTAGNLLGSIGYRGLSLATDDRMLPESLRRYAPQVRGTAATAARVVISQ 302 Query: 330 KGRDIYRTTVAPGSFVIDDLYPTSYNGDLDVTVIEADGTRSRFSVPYSALPESMRPGSER 389 GR I VAPG FVIDDLY ++Y GDLDV V EADG+ S FSVP++++PESMRPG R Sbjct: 303 NGRKIREVNVAPGPFVIDDLYDSAYAGDLDVQVFEADGSVSSFSVPFASVPESMRPGLSR 362 Query: 390 YSVTLGRTRD-TDSSLPFVDALYQRGLSNSMTGSLGLRLAPAYQSAVLGTTLAGPAGSLG 448 YS TLG+ R D F D YQRG+SN++T +LGLR+A Y + + G LA G+ G Sbjct: 363 YSFTLGQARQYGDGDDLFADFTYQRGMSNALTANLGLRVADDYLAMLGGGVLATRFGAFG 422 Query: 449 LSLNYSHADTGGGARG-GWMMGVSYSRAFDVTGTQFSIASYRYSTSGYRELADVISERQV 507 L+ YS A GAR GW +G+ YSR F TGT ++A YRYST GYREL DV+ R Sbjct: 423 LNSTYSSARVEDGARKQGWRIGLDYSRTFQPTGTTLTLAGYRYSTEGYRELGDVLGSRDA 482 Query: 508 RRTGFSSLASSTSYQQHSRIDLSLSQQLGSLGSLYLSGLTQTFHHDRSRITQLQFGYSTL 567 R G S SY+Q ++ +L +SQ LG G+LYLSG + F+ +SR TQLQFGYS Sbjct: 483 LRHG--DTWDSGSYKQRNQFNLLVSQALGGYGNLYLSGSSSDFYDGKSRDTQLQFGYSNT 540 Query: 568 WRNGVSLNLAFQRQQVSNVARTANDLDG-----RLAAVAQPGSSLMLSLSIPLGREGGER 622 W +S NLA+ RQ + + G R Q +L LS+S+PLG Sbjct: 541 W-GQLSYNLAWSRQTTTYYQEQGDQDPGVELLRRDRRSGQRNDTLTLSVSMPLGSSSRAP 599 Query: 623 PVASTSVVRAADQD--LYQTQVSGMLAGERHLSYSVGASHVPGGQQDSVNGNLGARLPKA 680 +++ + R+ D QT ++G L ER SY++ A+ + NG L + A Sbjct: 600 TLSAMATRRSGDSGGGSLQTGLNGTLGDERTWSYALSANRDSEVADTTWNGTLQKQAALA 659 Query: 681 NLNLNLTHGRDYWQVAGNVRGALAVHAGGITLGPYLGDTFALIEAKGAEGARLFNGQGAV 740 +N G Y Q +G +RGAL H G+TLGP +GDTFAL+EAKGA GA + GQGA Sbjct: 660 TVNAGYAQGDRYRQYSGGIRGALVAHRDGLTLGPSVGDTFALVEAKGASGAAIRGGQGAR 719 Query: 741 IDSHGYALLPSLSPYHRNVVELAASGKRHKTELLESQRTVIPYAGATLKLSFRTRTGHAL 800 ID +GYAL PSLSPY N + L G ELLE++R V PYAGA+++++FRT TGH L Sbjct: 720 IDGNGYALAPSLSPYRYNPISLDPVGIDPDAELLETERKVAPYAGASVRVTFRTLTGHPL 779 Query: 801 LIRLHRENGEPLPMGADVLDEQGEMVGMVGQGSQAYLRSDRVRAKLLVRWGDGQQERCAA 860 LI+ RE+G LP+GA V+D+ G +GMVGQG Q Y R++ R +LLV+WG ++ERC Sbjct: 780 LIQARREDGSVLPLGAVVVDDGGAAIGMVGQGGQVYARAENQRGRLLVQWGTARKERCEL 839 Query: 861 QYDLQGQDLSSPLLRLTANCIAAPRHGN 888 YDL G L+RL C AA N Sbjct: 840 PYDLAGVPRDQALIRLRGTCRAATTDSN 867 >dbj|GAA17682.1| usher CupA3 [Pseudomonas aeruginosa NCMG1179] Length = 872 Score = 625 bits (1612), Expect = e-176, Method: Composition-based stats. Identities = 389/868 (44%), Positives = 519/868 (59%), Gaps = 30/868 (3%) Query: 44 RVARSVLSLGAGLLAWPVAVAGPAENSYRFLESLEMASPINKGSLSRFNRVGNVEPGIYS 103 R R+ +L AG +A + G A+ Y F + L + S + G LSRFN+ G ++PG Y Sbjct: 7 RRCRTGTALMAGGMALAASAFGHAQPGYEFDDRLLLGSSLGGGDLSRFNQDGRIDPGRYH 66 Query: 104 VDVFVNGSYSHRRALRFDLVEGMGAAACFKAEDAVLLDLRQDLVAQLGQ--------REC 155 VDV++N ++ R + F GA ED LRQ L A+ G R C Sbjct: 67 VDVYLNERFASRSEVSFRANPASGAVEPCLDEDF----LRQRLGAKPGDDPRKSGDGRHC 122 Query: 156 ARIDELAAGAQAVLDLSNLRINVSIPQSQLKHVARGYIDPELYDAGDSMGFLNYSISQY- 214 A +D G++ LD++ LR+++S+PQ+ L RGY+ PE +DAGDSMGF+NY + Y Sbjct: 123 AFLDARLPGSRFSLDVARLRLDLSVPQALLDLKPRGYVSPEEWDAGDSMGFVNYDTNLYR 182 Query: 215 --YAHTAQASSSSVYGFTNSGVNLGLWRLRQQGSLGYDSRSGL---RWNPVRTYARRALP 269 Y S Y NSG+NLGLWRLR Q + Y +G +WN +RTYA+RALP Sbjct: 183 SEYRGGESGRSDYAYVGLNSGINLGLWRLRHQSNYTYSRYNGQARRKWNSIRTYAQRALP 242 Query: 270 DWTSELTVGQSYTSGKLLSGLAYQGLELSSDERMLPDSQRGYAPVIRGTARSNAQVIVSQ 329 W SELT G+SYT+G LL + Y+GL L++D+RMLP+S R YAP +RGTA + A+V++SQ Sbjct: 243 AWRSELTAGESYTAGNLLGSIGYRGLSLATDDRMLPESLRRYAPQVRGTAATAARVVISQ 302 Query: 330 KGRDIYRTTVAPGSFVIDDLYPTSYNGDLDVTVIEADGTRSRFSVPYSALPESMRPGSER 389 GR I VAPG FVIDDLY ++Y GDLDV V EADG+ S FSVP++++PESMRPG R Sbjct: 303 NGRKIREVNVAPGPFVIDDLYDSAYAGDLDVQVFEADGSVSSFSVPFASVPESMRPGLSR 362 Query: 390 YSVTLGRTRD-TDSSLPFVDALYQRGLSNSMTGSLGLRLAPAYQSAVLGTTLAGPAGSLG 448 YS TLG+ R D F D YQRG+SN++T +LGLR+A Y + + G LA G+ G Sbjct: 363 YSFTLGQARQYGDGDDLFADFTYQRGMSNALTANLGLRVADDYLAMLGGGVLATRFGAFG 422 Query: 449 LSLNYSHADTGGGARG-GWMMGVSYSRAFDVTGTQFSIASYRYSTSGYRELADVISERQV 507 L+ YS A GAR GW +G+ YSR F TGT ++A YRYST GYREL DV+ R Sbjct: 423 LNSTYSSARVEDGARKQGWRIGLDYSRTFQPTGTTLTLAGYRYSTEGYRELGDVLGSRDA 482 Query: 508 RRTGFSSLASSTSYQQHSRIDLSLSQQLGSLGSLYLSGLTQTFHHDRSRITQLQFGYSTL 567 R G S SY+Q ++ ++ +SQ LG G+LYLSG + F+ +SR TQLQFGYS Sbjct: 483 LRHG--DTWDSGSYKQRNQFNVLVSQALGGYGNLYLSGSSSDFYDGKSRDTQLQFGYSNT 540 Query: 568 WRNGVSLNLAFQRQQVSNVARTANDLDG-----RLAAVAQPGSSLMLSLSIPLGREGGER 622 W +S NLA+ RQ + + G R Q +L LS+S+PLG Sbjct: 541 W-GQLSYNLAWSRQTTTYYQEQGDQDPGVELLRRDRRSGQRNDTLTLSVSMPLGSSSRAP 599 Query: 623 PVASTSVVRAADQ--DLYQTQVSGMLAGERHLSYSVGASHVPGGQQDSVNGNLGARLPKA 680 +++ + R+ D QT ++G L ER SY++ A+ + NG L + A Sbjct: 600 TLSAMATRRSGDSRGGSLQTGLNGTLGDERTWSYALSANRDSEVADTTWNGTLQKQAALA 659 Query: 681 NLNLNLTHGRDYWQVAGNVRGALAVHAGGITLGPYLGDTFALIEAKGAEGARLFNGQGAV 740 +N G Y Q +G +RGAL H G+TLGP +GDTFAL+EAKGA GA + GQGA Sbjct: 660 TVNAGYAQGDRYRQYSGGIRGALVAHRDGLTLGPSVGDTFALVEAKGASGAAIRGGQGAR 719 Query: 741 IDSHGYALLPSLSPYHRNVVELAASGKRHKTELLESQRTVIPYAGATLKLSFRTRTGHAL 800 ID +GYAL PSLSPY N + L G ELLE++R V PYAGA+++++FRT TGH L Sbjct: 720 IDGNGYALAPSLSPYRYNPISLDPVGIDPDAELLETERKVAPYAGASVRVTFRTLTGHPL 779 Query: 801 LIRLHRENGEPLPMGADVLDEQGEMVGMVGQGSQAYLRSDRVRAKLLVRWGDGQQERCAA 860 LI+ RE+G LP+GA V+D+ G +GMVGQG Q Y R++ R +LLV+WG ++ERC Sbjct: 780 LIQARREDGSVLPLGAVVVDDGGAAIGMVGQGGQVYARAENQRGRLLVQWGTARKERCEL 839 Query: 861 QYDLQGQDLSSPLLRLTANCIAAPRHGN 888 YDL G L+RL C AA N Sbjct: 840 PYDLAGVSRDQALIRLRGTCRAATTDSN 867