BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4566.p (1087 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003375798.1| two-component system sensor-response regulat... 661 0.0 ref|ZP_06729455.1| capsular synthesis regulatory two-component s... 646 0.0 ref|NP_523181.1| capsular synthesis two-component sensor kinase ... 641 0.0 emb|CCA87260.1| putative capsular synthesis two-component sensor... 627 e-177 emb|CCA83593.1| putative capsular synthesis two-component sensor... 625 e-176 >ref|YP_003375798.1| two-component system sensor-response regulator hybrid protein [Xanthomonas albilineans GPE PC73] emb|CBA15810.1| probable two-component system sensor-response regulator hybrid protein [Xanthomonas albilineans] Length = 1097 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 442/1112 (39%), Positives = 635/1112 (57%), Gaps = 41/1112 (3%) Query: 1 MPRQILALSERYYRRLLYGCATLLSVAIVCAVMFLGYSAFTQFRERQIGSFTSKREQIKS 60 MP+++LA + RYYRR+LYG AT LSV+IV A + Q+R++QI F E++++ Sbjct: 1 MPQKLLARTGRYYRRILYGAATALSVSIVAAALLFCSGIIDQYRDKQIAQFVKSSEEVQT 60 Query: 61 EVDRLAARVVQFAEMYARLQHLYKKELMVLDTYSERVDPGE-ITRSPESLTVVPFSLVIR 119 +VD L+AR+VQFA++Y + +L + +++ + Y+ ++ G+ +T + + LT VPF+LV Sbjct: 61 QVDELSARLVQFADLYEGVWNLRQNDVVPVQRYARKLAEGKGVTVTEDDLTAVPFTLVSS 120 Query: 120 GDTAADRLRLATLLLLLRQASALPMFNPAEPGVTLDGFIYTAEAGFLAVSPPLSGVEEQE 179 + AD RLAT L ++R SA P + + GVTLDGF+Y+ +A F+AVSP + + Q Sbjct: 121 LNGTADAARLATALRVVRDMSAAPSIDAKKTGVTLDGFLYSPDATFMAVSPAMGLAQLQS 180 Query: 180 VRRLGISPYISA-ISAPVDAAFAAERERAAR-AQGSAGQRVLWMSPALSAPLQRSAVTRL 237 R G+ +I I P ER AA AQ QR LW PA S V++L Sbjct: 181 ARSDGVRAFIRQHIDEP-------ERLIAATPAQDLRSQRPLW-RPADERDGGLS-VSQL 231 Query: 238 AVRIALDKGDQATAVFSVPASQFRQFFMKNE-EMPGLMVFEGQGSTRLLSSPDPHVNPLL 296 V + D T S+P QF +FF++ E PG + G L P L Sbjct: 232 IVPMFRDGRRIFTIALSLPDRQFMRFFLRKETRRPGFFLLSNAGQENLGDYPRGAEEADL 291 Query: 297 MRHIQEHVRHATDPHDHVGHFHDDGSFFIAQTIEGPEWVVVLTFTWRDVLAGLQGDFTTG 356 +R ++ + F+ G+FF+AQ I GP+W+ V +TW +VL LQ +F TG Sbjct: 292 LRRVRAQTERFSLVGGEPIAFYRSGTFFVAQRIGGPDWIAVYAYTWEEVLGNLQHEFVTG 351 Query: 357 AVWGLFALLFVWVATLYFDRCVIGPLQKKALAMVESRQFSQTIIDTLPVGIAVYAPGSGE 416 A+ L AL F+W T+YFD V PL + A ++E+ FS+ IIDTLP+GI +YAP + Sbjct: 352 ALVCLLALGFMWATTVYFDLRVTKPLLRSAEKLIEAEHFSKAIIDTLPIGIGIYAPDTDT 411 Query: 417 VVLRNAVASRMLEQSALP---CAAFYAQIL----TAVRVGDNLRQAMIEAELPLRDGGIS 469 V+L N VA RML LP FY ++ GD R + IE L +G S Sbjct: 412 VMLENGVAQRML--GNLPDEGNLGFYRHVMCERNAEAVAGD--RHSFIEVRWDLAEGQNS 467 Query: 470 HLGAVWSRTRFSGQDVLLLGMIDLNMQKAHEALMREAKSMADRANQAKSMFLAQVSHEIR 529 ++G S+TRF GQ V+LLG++D+N +KA+E L+ EAK AD AN+AKSMFLA VSHEIR Sbjct: 468 YIGVASSQTRFGGQPVVLLGLVDINERKANEMLLMEAKQTADEANRAKSMFLAIVSHEIR 527 Query: 530 TPLHGAIGHMELLAREELSLPQRQRIELIRHAFDMLMGLVNDILDITKIESQSITLASEE 589 TPLHGA+GH+ELL+R LS Q + +++IR +FD L+ LVN +LD TK+E+ ++ + + Sbjct: 528 TPLHGAMGHLELLSRSPLSFEQGEWVDMIRRSFDALLNLVNALLDSTKLEANALKINPVQ 587 Query: 590 LRVNDLLEECAQLFAPLALDKGLRFHCLPCAALEQPVRGDPRRLLQILQNLVGNAVKFTA 649 + N++LE CA+ F L G+ F+C+ L+ + GD +RL QILQNL+GNA KFT Sbjct: 588 MSPNEVLERCARSFGASILQGGVAFYCVTDPDLDAMLEGDDQRLAQILQNLLGNAAKFTE 647 Query: 650 SGGITLSAQLLQSSQDKSIVRFEVADTGIGISPSARQRIFKSLQQADDSISQRFGGTGLG 709 G I +S++ L+ + + RFEVADTGIGI S + IF L QADDSIS+RFGGTGLG Sbjct: 648 RGSIMISSRCLKQADGELWARFEVADTGIGIPASMQSAIFNPLAQADDSISRRFGGTGLG 707 Query: 710 LSLCRRLAELMGGDITLDSEPGRGSVFGAEITLALVEGGGTLPVSRPLAGKTVALHCHDA 769 L LCR L+ LMGG I++ SEPG GSVF ++ G L SRPL G V + C Sbjct: 708 LFLCRNLSHLMGGRISVRSEPGTGSVFWVDLPFKRT-GRALLAESRPLEGFVVDVLCPHP 766 Query: 770 DMAAMLRDYLAEWGAARRDSASTPGAVIHLVAPDCVDDFIACAQHQSVPAVLICPDVAMR 829 AML + L WGA+ +A A +H+ D+ + S +L V+ + Sbjct: 767 AWRAMLAERLRRWGASLH-AADAANASLHVRIVAEADNRTWRSADLSAVPMLGTVFVSAK 825 Query: 830 ASLAPGWQ----QVSAFDRHDWLRALA--SRPAAVEPQPVAE---LVSVAAGLDVLVVED 880 L P +VS+ L ALA + AA Q A + V LD+LV ED Sbjct: 826 GPLTPRRHEKQIEVSSLTYAGLLEALAELTGTAAEHAQRRASGAVVEGVEQNLDILVAED 885 Query: 881 DYVNLTLMQQQLQALGCASPRLARDGLDALAQWQAHPADVLITDLGMPGLDGVALATRVR 940 D VN TL++ QL ALGC R+A DG++AL W AD++ITDLGMP LDGV L ++R Sbjct: 886 DAVNRTLIKHQLAALGCTRVRVAIDGMEALKLWLERRADLVITDLGMPHLDGVGLLRKLR 945 Query: 941 EQQPHARIIATTAAGPGSLAQLPAALFDALLIKPASLQQMQEILTRLIRTTPAPSVQAVP 1000 E P AR++AT+A+ ++ D+L KP L ++ +L I + + + A P Sbjct: 946 EFDPDARVVATSASAAAEISADTEQFSDSLQ-KPVLLSDLRRVLRNAILSRSSSTNSAKP 1004 Query: 1001 L----DPFERVVREAFRQSWPAEKEKLQQAIERGEHERVLRILHRLQGGLQAMGQDALAA 1056 D + ++R+AF W AE++ ++QA+ + E + R +HRLQG L A+G D L Sbjct: 1005 QEYRSDELDAMLRQAFHAEWRAERQLIEQALAVQDLESLRRRIHRLQGALMALGMDDLVE 1064 Query: 1057 RSVELQRAITARESMALVA-CREWMQAMESAS 1087 LQ+A + M L + CR+ + +E+ + Sbjct: 1065 ELQLLQQAYAGGDWMLLRSRCRQLLSHVEAVA 1096 >ref|ZP_06729455.1| capsular synthesis regulatory two-component sensor kinase and response regulator hybrid transcription regulator protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gb|EFF49425.1| capsular synthesis regulatory two-component sensor kinase and response regulator hybrid transcription regulator protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 1092 Score = 646 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 421/1101 (38%), Positives = 616/1101 (55%), Gaps = 42/1101 (3%) Query: 1 MPRQILALSERYYRRLLYGCATLLSVAIVCAVMFLGYSAFTQFRERQIGSFTSKREQIKS 60 MP+++LA + RYYRR+LYG AT LS++IV A + Q+R++Q +++++ Sbjct: 1 MPQKLLARTGRYYRRILYGAATALSLSIVTAAVLFCSGIIDQYRDKQAAQLAKYSDEVQT 60 Query: 61 EVDRLAARVVQFAEMYARLQHLYKKELMVLDTYSERVDPGE-ITRSPESLTVVPFSLVIR 119 +VD L+AR++QF ++Y + +L + + + Y+ ++ G+ +T + + +T PF+LV Sbjct: 61 QVDELSARLIQFGDVYEGVWNLRRNGEVPVQRYARKLAEGQGVTVTQDDVTATPFTLVSS 120 Query: 120 GDTAADRLRLATLLLLLRQASALPMFNPAEPGVTLDGFIYTAEAGFLAVSPPLSGVEEQE 179 +AD RLAT L ++R SA + + + GVTL+GF+YT + FLA SP + ++ Sbjct: 121 LSGSADTDRLATALRVVRDISAASLIDARKTGVTLEGFLYTPDGSFLAASPVIKMDALRD 180 Query: 180 VRRLGISPYISAISAPVDAAFAAERERAARAQGSAGQRVLWMSPALSAPLQRSAVTRLAV 239 R G+ +I A V+ AA R R+LW PA ++ Q S +++L V Sbjct: 181 ARDHGVEDFIRKRIAGVEHLVAAIPPHTLR-----NDRLLW-RPADASDGQTS-ISQLVV 233 Query: 240 RIALDKGDQATAVFSVPASQFRQFFMKNE-EMPGLMVFEGQGSTRLLSSPDPHVNPLLMR 298 + D Q T S+P QF +FF++ E PG + G+ L L+ Sbjct: 234 PMFHDGRRQFTIALSLPDRQFMRFFLREEARRPGFFLLSQDGNENLGDPLRDADEADLLA 293 Query: 299 HIQEHVRHATDPHDHVGHFHDDGSFFIAQTIEGPEWVVVLTFTWRDVLAGLQGDFTTGAV 358 I+ H + G+FF+ Q I GP+W+ V ++W DVL LQ +F TGA+ Sbjct: 294 KIRAHAVQFDQVASEPVTLYRGGTFFVVQRISGPDWISVYAYSWGDVLGNLQHEFVTGAL 353 Query: 359 WGLFALLFVWVATLYFDRCVIGPLQKKALAMVESRQFSQTIIDTLPVGIAVYAPGSGEVV 418 L AL +W +YFD V PL A ++E+ FS+ IIDTLPVGI +YAP + VV Sbjct: 354 VCLLALGLMWATVIYFDLRVTKPLLNSAEKLIEAEHFSEAIIDTLPVGIGIYAPETDSVV 413 Query: 419 LRNAVASRMLEQSALPCAAFYAQIL---TAVRVGDNLRQAMIEAELPLRDGGISHLGAVW 475 L N VA RML A FY ++ TA V + IE + + +G S++G Sbjct: 414 LENGVAKRMLGHGH-DSADFYRHVIRERTAEAV-PGTHHSFIEVQWDIAEGQSSYIGVAS 471 Query: 476 SRTRFSGQDVLLLGMIDLNMQKAHEALMREAKSMADRANQAKSMFLAQVSHEIRTPLHGA 535 S+TRF G+ V+LLG++D+N KA+E L+ +AK AD AN+AKS+FLA VSHEIRTPLHGA Sbjct: 472 SQTRFGGRPVILLGLVDINEHKANEMLLIQAKQTADEANRAKSIFLAIVSHEIRTPLHGA 531 Query: 536 IGHMELLAREELSLPQRQRIELIRHAFDMLMGLVNDILDITKIESQSITLASEELRVNDL 595 +GH+ELLAR L Q + +++IR +FD L+ LVND+LD TK+E+ ++ + + N++ Sbjct: 532 MGHLELLARSPLGFEQAEWVDMIRRSFDALLSLVNDLLDSTKLEANALKINPMPMSPNEV 591 Query: 596 LEECAQLFAPLALDKGLRFHCLPCAALEQPVRGDPRRLLQILQNLVGNAVKFTASGGITL 655 E CA+ F L + F+C+ L+ V GD +RL QILQNL+GNAVKFT G I + Sbjct: 592 AERCARSFGASILQNDVAFYCMTDPDLDGVVEGDDQRLAQILQNLLGNAVKFTERGSIMI 651 Query: 656 SAQLLQSSQDKSIVRFEVADTGIGISPSARQRIFKSLQQADDSISQRFGGTGLGLSLCRR 715 S++ L+ D RFEVADTGIGI S + IFK L QADDSIS+RFGGTGLGL LCR Sbjct: 652 SSRCLKQQGDTIWARFEVADTGIGIPASMQSAIFKPLAQADDSISRRFGGTGLGLFLCRN 711 Query: 716 LAELMGGDITLDSEPGRGSVFGAEITLALVEGGGTLPVS-RPLAGKTVALHCHDADMAAM 774 L+ LMGG I++ SEPG+GSVF + L LP RPL G +V L C +M Sbjct: 712 LSRLMGGRISVSSEPGKGSVF--RVDLPFKRNARPLPADPRPLEGLSVDLVCQQPLWRSM 769 Query: 775 LRDYLAEWGAARRDSASTPGAVIHLVAPDCVDDFIACAQHQ---SVPAVLICPDVAMRAS 831 L + L+ WGA +A+ P AP + F+ A + S L V ++ Sbjct: 770 LAERLSRWGATLYVAAAQP-------APLHIRMFVEAAWNAADLSAVPTLGTVFVTAKSP 822 Query: 832 LAPGWQQ----VSAFDRHDWLRAL----ASRPAAVEPQPVAELV-SVAAGLDVLVVEDDY 882 L P + VS+ L A+ + P E + + V ++ LD+LV EDD Sbjct: 823 LTPHRHENQVDVSSLSYEGLLDAMTLLTGTTPRHSERRDRGDAVETIEQDLDILVAEDDA 882 Query: 883 VNLTLMQQQLQALGCASPRLARDGLDALAQWQAHPADVLITDLGMPGLDGVALATRVREQ 942 VN TL++ QL ALGC R+A DG++AL W AD++ITDLGMP LDGV L ++RE Sbjct: 883 VNRTLIKHQLAALGCRRVRVAVDGMEALNLWIERHADLVITDLGMPHLDGVGLLRKLREF 942 Query: 943 QPHARIIATTAAGPGSLAQLPAALFDALLIKPASLQQMQEILTRLI----RTTPAPSVQA 998 P AR++AT+A+ ++ F LL KP L ++ +L I +T +V+ Sbjct: 943 DPDARVVATSASAAAEISADAEQ-FSDLLQKPVLLSDLRRVLRNAILARSASTGLTAVRE 1001 Query: 999 VPLDPFERVVREAFRQSWPAEKEKLQQAIERGEHERVLRILHRLQGGLQAMGQDALAARS 1058 D + ++++AFR W +E++ ++QA+ + E + R +HRLQG L A+G D L A Sbjct: 1002 SRSDELDALLQQAFRSEWESERQLIEQALAMQDLESLRRRMHRLQGALMALGADDLGAEV 1061 Query: 1059 VELQRAITARESMALVA-CRE 1078 LQ+ E L CR+ Sbjct: 1062 QALQQLYPGAEWTVLTERCRQ 1082 >ref|NP_523181.1| capsular synthesis two-component sensor kinase and response regulator transcription regulator protein [Ralstonia solanacearum GMI1000] emb|CAD18773.1| probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein [Ralstonia solanacearum GMI1000] Length = 1098 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 423/1098 (38%), Positives = 616/1098 (56%), Gaps = 34/1098 (3%) Query: 1 MPRQILALSERYYRRLLYGCATLLSVAIVCAVMFLGYSAFTQFRERQIGSFTSKREQIKS 60 MP+++L + RY RR+LYGC LS+AIV AV+ LG Q+ +RQ+ F ++++ Sbjct: 1 MPQRLLTKTGRYSRRVLYGCTAALSIAIVGAVLLLGRGIIDQYGDRQVARFVRTSGEVRT 60 Query: 61 EVDRLAARVVQFAEMYARLQHLYKKELMVLDTYSERV--DPGEITRSPESLTVVPFSLVI 118 EVD L+AR+ QFA++Y + +L + +++ Y+ ++ D G T + LT P +L+ Sbjct: 61 EVDGLSARLAQFADLYEGVWNLRQNDVVPTRRYAGKLAADRGA-TVTGADLTATPVTLIS 119 Query: 119 RGDTAADRLRLATLLLLLRQASALPMFNPAEPGVTLDGFIYTAEAGFLAVSPPLSGVEEQ 178 D AD RLA L +LR S P+ + + GVTLDGF+YT +A FLA P L + + Sbjct: 120 SLDRPADGARLAMALRVLRDVSGAPLMDAQKLGVTLDGFLYTPDATFLAAFPALRPADLR 179 Query: 179 EVRRLGISPYISAISAPVDAAFAAERERAARAQGSAGQRVLWMSPALSAPLQRSAVTRLA 238 R G P+I A V+ A+ A R G+R LW PA ++V++L Sbjct: 180 SAREQGPQPFIRERIAAVEQRIASSAPEAVR-----GRRPLWY-PA-DETNGHASVSQLI 232 Query: 239 VRIALDKGDQATAVFSVPASQFRQFFMKNE-EMPGLMVFEGQGSTRLLSSPDPHVNPLLM 297 V + D T ++P +QF +FF++ E PG + G L P L+ Sbjct: 233 VPMYRDNARVLTIALTLPDAQFTRFFLRKESRRPGFFLLSQTGQRSLGDLPADLEERRLL 292 Query: 298 RHIQEHVRHATDPHDHVGHFHDDGSFFIAQTIEGPEWVVVLTFTWRDVLAGLQGDFTTGA 357 + + + F+ DG FF+++ I GP+W+ V + W+DV + LQ +F G Sbjct: 293 DTVLANADWSRQAGAEPTTFYKDGVFFVSRRIAGPDWIAVYAYRWQDVWSDLQHEFFAGM 352 Query: 358 VWGLFALLFVWVATLYFDRCVIGPLQKKALAMVESRQFSQTIIDTLPVGIAVYAPGSGEV 417 V+ + L +W YFD V PL A ++E+ FS+ IIDTLP+GI VY+P + + Sbjct: 353 VFCVLVLGLLWATAAYFDLRVTRPLLSDAKKLIEAEHFSKAIIDTLPIGIGVYSPETDSI 412 Query: 418 VLRNAVASRMLEQSALPCAAFYAQILTAVRVGDNL---RQAMIEAELPLRDGGISHLGAV 474 +L N+VA RML + + + + R + + R + IE +G S++G Sbjct: 413 LLENSVAVRMLGNVSNEQRLRFYRYVMHERDAEPVPGARHSFIEVRWERAEGQSSYIGVA 472 Query: 475 WSRTRFSGQDVLLLGMIDLNMQKAHEALMREAKSMADRANQAKSMFLAQVSHEIRTPLHG 534 S TRF G+ +LLG++D+N +KA+E L+ EAK AD AN+AKSMFLA V HEIRTPLHG Sbjct: 473 SSWTRFGGRSAVLLGLVDMNERKANEILLMEAKQTADEANRAKSMFLAIVGHEIRTPLHG 532 Query: 535 AIGHMELLAREELSLPQRQRIELIRHAFDMLMGLVNDILDITKIESQSITLASEELRVND 594 A+GH+ELLAR LSL QR+ +++ +FD L+ LVND+LD TK+E+ ++ ++ + N+ Sbjct: 533 AMGHLELLARSALSLEQREWVDMTSRSFDALLTLVNDLLDSTKLEANALQISPVPMCPNE 592 Query: 595 LLEECAQLFAPLALDKGLRFHCLPCAALEQPVRGDPRRLLQILQNLVGNAVKFTASGGIT 654 +LE CA+ F + G+ FHC+ L+ V GD +RL QILQNL+ NA KFT G IT Sbjct: 593 VLERCARSFGAAIVQGGVAFHCITDPDLDLVVDGDDQRLTQILQNLLSNAAKFTERGTIT 652 Query: 655 LSAQLLQSSQDKSIVRFEVADTGIGISPSARQRIFKSLQQADDSISQRFGGTGLGLSLCR 714 ++++ L+ K RFEVADTGIGI + + IF L QADDSIS+RFGGTGLGL LCR Sbjct: 653 IASRCLKREDGKVWARFEVADTGIGIPAAMQSTIFNPLAQADDSISRRFGGTGLGLFLCR 712 Query: 715 RLAELMGGDITLDSEPGRGSVFGAEITLALVEGGGTLPVSRPLAGKTVALHCHDADMAAM 774 LA LMGG I++ SEPG GS F ++ A P L G +V L C + M Sbjct: 713 NLAHLMGGRISVRSEPGIGSAFRVDLPFAQ-NTRAPAPPPPVLTGLSVELLCPVSQWRGM 771 Query: 775 LRDYLAEWGAARRDSASTPGAVIHL-VAPDCVDDFIACAQHQSVP---AVLICPDVAMRA 830 L + L WGA R + ++ +H+ +A + A +VP V + + A Sbjct: 772 LAERLRRWGATVRPAEASAAEPLHIRLAVEADGRAWHAADLGTVPLLGTVFVTAKGPLHA 831 Query: 831 SLAPGWQQVSAFDRHDWLRAL------ASRPAAVEPQPVAELVSVAAGLDVLVVEDDYVN 884 +VS+F R L AL A+RPA P +A + A LD+LV EDD VN Sbjct: 832 HRDGQKIEVSSFTREGLLAALTELTGAAARPAET-PVSMAVDEGLGADLDILVAEDDAVN 890 Query: 885 LTLMQQQLQALGCASPRLARDGLDALAQWQAHPADVLITDLGMPGLDGVALATRVREQQP 944 TL++ QL ALGC R+A DG++AL W AD++ITDLGMP LDG+ L ++RE P Sbjct: 891 RTLIRHQLAALGCQRVRVAVDGVEALEMWLERRADLVITDLGMPRLDGIGLLHKLRELDP 950 Query: 945 HARIIATTAAGPGSLAQLPAALFDALLIKPASLQQM-----QEILTRLIRTTPAPSVQAV 999 AR+IAT+A+ + + F +LL KP SL + QE+L+R TPA + + V Sbjct: 951 RARVIATSASVSAEI-KADVEQFSSLLQKPVSLGDLRRILRQEMLSRTASPTPAVA-EPV 1008 Query: 1000 PLDPFERVVREAFRQSWPAEKEKLQQAIERGEHERVLRILHRLQGGLQAMGQDALAARSV 1059 D + ++R+AFR W E++ ++QA+ + + + R +HRLQG L A+G DAL Sbjct: 1009 RADALDALLRQAFRTEWNKERKSIEQALAGKDMDALRRRVHRLQGALMALGADALVEELR 1068 Query: 1060 ELQRAITARESMALVACR 1077 LQ I +R AL+A R Sbjct: 1069 GLQD-IYSRADWALIAIR 1085 >emb|CCA87260.1| putative capsular synthesis two-component sensor kinase and response regulator transcription regulator protein (rcsC) [Ralstonia syzygii R24] Length = 1083 Score = 627 bits (1617), Expect = e-177, Method: Composition-based stats. Identities = 414/1083 (38%), Positives = 600/1083 (55%), Gaps = 34/1083 (3%) Query: 16 LLYGCATLLSVAIVCAVMFLGYSAFTQFRERQIGSFTSKREQIKSEVDRLAARVVQFAEM 75 +LYGC LS+AIV V+ LG Q+ ++Q+ F ++++EVD L+AR+ QFA++ Sbjct: 1 MLYGCTAALSIAIVGTVLLLGRGIIDQYGDKQVARFVRTSGEVQTEVDELSARLAQFADL 60 Query: 76 YARLQHLYKKELMVLDTYSERV--DPGEITRSPESLTVVPFSLVIRGDTAADRLRLATLL 133 Y + +L + +++ + Y ++ D G +T + LT P +L+ AD RLA L Sbjct: 61 YEGVWNLRQNDVVPMRRYVGKLASDRG-VTVTGADLTATPVTLISSLGRPADGARLAMAL 119 Query: 134 LLLRQASALPMFNPAEPGVTLDGFIYTAEAGFLAVSPPLSGVEEQEVRRLGISPYISAIS 193 +LR S P+ N + GVTLDGF+Y +A FLA P + + Q R G +I Sbjct: 120 RVLRDVSGAPLMNAQKTGVTLDGFLYAPDATFLAAFPAMGPADLQRAREQGPQAFIRERI 179 Query: 194 APVDAAFAAERERAARAQGSAGQRVLWMSPALSAPLQRSAVTRLAVRIALDKGDQATAVF 253 A V+ AA + R++ R LW PA A ++V++L V + + T Sbjct: 180 AAVEQRIAASAPQTVRSR-----RPLWY-PADEAN-GHASVSQLIVPMYREHERVLTIAL 232 Query: 254 SVPASQFRQFFMKNE-EMPGLMVFEGQGSTRLLSSPDPHVNPLLMRHIQEHVRHATDPHD 312 ++P QF +FF++ E PG + G L P L+ I + + Sbjct: 233 TLPDQQFTRFFLRKESRRPGFFLLGKTGQRNLGDPPADVDEKRLLDKILANASWSGRAGA 292 Query: 313 HVGHFHDDGSFFIAQTIEGPEWVVVLTFTWRDVLAGLQGDFTTGAVWGLFALLFVWVATL 372 F+ DG FF+++ I GP+W+ + + WRDV + LQ +F TG ++ + AL +W + Sbjct: 293 EPTTFYKDGIFFVSRRIAGPDWIALYAYRWRDVASDLQREFFTGMLFCVLALGLLWAMAV 352 Query: 373 YFDRCVIGPLQKKALAMVESRQFSQTIIDTLPVGIAVYAPGSGEVVLRNAVASRMLEQ-S 431 YFD V PL A ++E+ FS+ IIDTLP+GI VY+P S ++L N VA+RML S Sbjct: 353 YFDLRVTRPLLSDAKKLIEAEHFSKAIIDTLPIGIGVYSPESDSILLENCVAARMLGNVS 412 Query: 432 ALPCAAFYAQILTA--VRVGDNLRQAMIEAELPLRDGGISHLGAVWSRTRFSGQDVLLLG 489 FY ++ + + IE + +G S++G S TRF G +L G Sbjct: 413 DEQRRRFYRHVMHERDAEPVPGAQHSFIEVRWEISEGQSSYIGVASSWTRFGGSSAVLFG 472 Query: 490 MIDLNMQKAHEALMREAKSMADRANQAKSMFLAQVSHEIRTPLHGAIGHMELLAREELSL 549 ++D+N +KA+E L+ EAK AD AN+AKSMFLA V HEIRTPLHGAIGH+ELLAR LSL Sbjct: 473 LVDMNERKANEILLVEAKQTADEANRAKSMFLAIVGHEIRTPLHGAIGHLELLARSSLSL 532 Query: 550 PQRQRIELIRHAFDMLMGLVNDILDITKIESQSITLASEELRVNDLLEECAQLFAPLALD 609 QR+ +++ +FD L+ LVND+LD TKIE+ ++ ++ + N++LE CA+ F + Sbjct: 533 EQREWVDMTSRSFDALLTLVNDLLDSTKIEANALQISPVPMCPNEVLERCARSFGAAIVQ 592 Query: 610 KGLRFHCLPCAALEQPVRGDPRRLLQILQNLVGNAVKFTASGGITLSAQLLQSSQDKSIV 669 G+ FHC+ L+ V GD +RL QILQNL+ NA KFT G IT+S++ L+ K Sbjct: 593 GGVAFHCITDPDLDLIVDGDDQRLTQILQNLLSNAAKFTERGTITISSRCLKREDGKVWA 652 Query: 670 RFEVADTGIGISPSARQRIFKSLQQADDSISQRFGGTGLGLSLCRRLAELMGGDITLDSE 729 RFEVADTGIGI + + IF L QADDSIS+RFGGTGLGL LCR LA LMGG I++ SE Sbjct: 653 RFEVADTGIGIPAAMQSTIFNPLAQADDSISRRFGGTGLGLFLCRNLAHLMGGRISVRSE 712 Query: 730 PGRGSVFGAEITLALVEGG-GTLPVSRPLAGKTVALHCHDADMAAMLRDYLAEWGAARRD 788 P GS F + L V+ P L+G +V L C + ML + L WGA R Sbjct: 713 PSIGSAF--RVDLPFVQNTRAPAPPPPVLSGLSVELLCPVSWWREMLAERLRRWGATVRP 770 Query: 789 SASTPGAVIHL-VAPDCVDDFIACAQHQSVP---AVLICPDVAMRASLAPGWQQVSAFDR 844 + ++ +H+ +A + A +VP V + + A +VS+F R Sbjct: 771 ADTSAAEPLHIRLAVEADGRAWNSADLSAVPLLGTVFVTAKGPLSAHRDGQKIEVSSFSR 830 Query: 845 HDWLRAL------ASRPAAVEPQPVAELVSVAAGLDVLVVEDDYVNLTLMQQQLQALGCA 898 L AL A+RPA P +A + LD+LV EDD VN TL++ QL ALGC Sbjct: 831 EGLLAALTALTGGAARPAET-PVFMAVDEGLGPNLDILVAEDDAVNCTLIKHQLAALGCQ 889 Query: 899 SPRLARDGLDALAQWQAHPADVLITDLGMPGLDGVALATRVREQQPHARIIATTAAGPGS 958 R+A DG++AL W AD++ITDLGMP LDG+ L ++RE P AR+IAT+A+ Sbjct: 890 RVRVAVDGVEALEMWIERRADLVITDLGMPRLDGIGLLHKLRELDPRARVIATSASVSAE 949 Query: 959 LAQLPAALFDALLIKPASLQQMQEILTR--LIRT-TPAP-SVQAVPLDPFERVVREAFRQ 1014 + + F LL KP SL ++ +L L RT +PAP + + V D + ++R+AFR Sbjct: 950 I-KADVEQFSNLLQKPVSLSDLRRVLRHEMLSRTASPAPAATEPVRSDELDALLRQAFRT 1008 Query: 1015 SWPAEKEKLQQAIERGEHERVLRILHRLQGGLQAMGQDALAARSVELQRAITARESMALV 1074 W E+ ++QA+ + + + R +HRLQG L A+G D L LQ I +R AL+ Sbjct: 1009 EWNKERTSIEQALAGKDMDVLRRRVHRLQGALMALGADELVEELRGLQD-IYSRADWALI 1067 Query: 1075 ACR 1077 + R Sbjct: 1068 SIR 1070 >emb|CCA83593.1| putative capsular synthesis two-component sensor kinase and response regulator transcription regulator protein (rcsC) [blood disease bacterium R229] Length = 1098 Score = 625 bits (1612), Expect = e-176, Method: Composition-based stats. Identities = 419/1098 (38%), Positives = 609/1098 (55%), Gaps = 34/1098 (3%) Query: 1 MPRQILALSERYYRRLLYGCATLLSVAIVCAVMFLGYSAFTQFRERQIGSFTSKREQIKS 60 MP+++L ++RY RR+LYGC LSVAIV V+ LG Q+ ++Q+ F ++++ Sbjct: 1 MPQRLLTKTDRYSRRVLYGCTAALSVAIVGTVLLLGRGIIDQYGDKQVARFVRTSGEVQT 60 Query: 61 EVDRLAARVVQFAEMYARLQHLYKKELMVLDTYSERV--DPGEITRSPESLTVVPFSLVI 118 EVD L+AR+ QFA++Y + +L + +++ + Y ++ D G +T + LT P +L+ Sbjct: 61 EVDELSARLAQFADLYEGVWNLRQNDVVPMRRYVGKLASDRG-VTVTGADLTATPVTLIS 119 Query: 119 RGDTAADRLRLATLLLLLRQASALPMFNPAEPGVTLDGFIYTAEAGFLAVSPPLSGVEEQ 178 AD RLA L +LR S P+ + + GVTLDGF+Y +A FLA P + + Q Sbjct: 120 SLGRPADGARLAMALRVLRDVSGAPLMDAQKTGVTLDGFLYAPDATFLAAFPAMGPADLQ 179 Query: 179 EVRRLGISPYISAISAPVDAAFAAERERAARAQGSAGQRVLWMSPALSAPLQRSAVTRLA 238 R G +I A V+ AA + R++ R LW PA A ++V++L Sbjct: 180 RAREQGPQAFIRERIAAVEQRIAASAPQTVRSR-----RPLWY-PADEAN-GHASVSQLI 232 Query: 239 VRIALDKGDQATAVFSVPASQFRQFFMKNE-EMPGLMVFEGQGSTRLLSSPDPHVNPLLM 297 V + + T ++P QF +FF++ E PG + G L P L+ Sbjct: 233 VPMYREHERVLTIALTLPDQQFTRFFLRKESRRPGFFLLGKTGQRNLGDPPTDIDEKRLL 292 Query: 298 RHIQEHVRHATDPHDHVGHFHDDGSFFIAQTIEGPEWVVVLTFTWRDVLAGLQGDFTTGA 357 I + F+ DG FF+++ I GP+W+ + + WRDV + LQ +F TG Sbjct: 293 DKILASASWSGRAGAEPTTFYKDGIFFVSRRIAGPDWIALYAYRWRDVASDLQREFFTGM 352 Query: 358 VWGLFALLFVWVATLYFDRCVIGPLQKKALAMVESRQFSQTIIDTLPVGIAVYAPGSGEV 417 ++ + AL +W +YFD V PL A ++E+ FS+ IIDTLP+GI VY+P S + Sbjct: 353 LFCVLALGLLWAMAVYFDLRVTRPLLSDAKKLIEAEHFSKAIIDTLPIGIGVYSPESDSI 412 Query: 418 VLRNAVASRMLEQ-SALPCAAFYAQILTA--VRVGDNLRQAMIEAELPLRDGGISHLGAV 474 +L N VA+RML S FY ++ + + IE + +G S++G Sbjct: 413 LLENCVAARMLGNVSDEQRRRFYRHVMHERDAEPVPGAQHSFIEVRWEISEGQSSYIGVA 472 Query: 475 WSRTRFSGQDVLLLGMIDLNMQKAHEALMREAKSMADRANQAKSMFLAQVSHEIRTPLHG 534 S TRF G +L G++D+N +KA+E L+ EAK AD AN+AKSMFLA V HEIRTPLHG Sbjct: 473 SSWTRFGGSSAVLFGLVDMNERKANEILLVEAKQTADEANRAKSMFLAIVGHEIRTPLHG 532 Query: 535 AIGHMELLAREELSLPQRQRIELIRHAFDMLMGLVNDILDITKIESQSITLASEELRVND 594 AIGH+ELLAR LSL QR+ +++ +FD L+ LVND+LD TKIE+ ++ ++ + N+ Sbjct: 533 AIGHLELLARSSLSLEQREWVDMTSRSFDALLTLVNDLLDSTKIEANALQISPVPMCPNE 592 Query: 595 LLEECAQLFAPLALDKGLRFHCLPCAALEQPVRGDPRRLLQILQNLVGNAVKFTASGGIT 654 +LE CA+ F + G+ FHC+ L+ V GD +RL QILQNL+ NA KFT G IT Sbjct: 593 VLERCARSFGAAIVQGGVAFHCITDPDLDLVVDGDDQRLTQILQNLLSNAAKFTERGTIT 652 Query: 655 LSAQLLQSSQDKSIVRFEVADTGIGISPSARQRIFKSLQQADDSISQRFGGTGLGLSLCR 714 +S++ L+ K RFEVADTGIGI + + IF L QADDSIS+RFGGTGLGL LCR Sbjct: 653 ISSRCLKREDGKVWARFEVADTGIGIPAAMQSTIFNPLAQADDSISRRFGGTGLGLFLCR 712 Query: 715 RLAELMGGDITLDSEPGRGSVFGAEITLALVEGG-GTLPVSRPLAGKTVALHCHDADMAA 773 LA LMGG I++ SEPG GS F + L V+ P L+G +V L C + Sbjct: 713 NLAHLMGGRISVRSEPGIGSAF--RVDLPFVQNTRAPAPPPPVLSGLSVELLCPVSLWCE 770 Query: 774 MLRDYLAEWGAARRDSASTPGAVIHL-VAPDCVDDFIACAQHQSVP---AVLICPDVAMR 829 ML + L WGA R + ++ +H+ +A + A +VP V + + Sbjct: 771 MLAERLRRWGATVRPADTSAAEPLHIRLAVEADGRAWNSADLSAVPLLGTVFVTAKGPLS 830 Query: 830 ASLAPGWQQVSAFDRH------DWLRALASRPAAVEPQPVAELVSVAAGLDVLVVEDDYV 883 A +VS+F R L A+RPA P +A + LD+LV EDD V Sbjct: 831 AHRDGQKIEVSSFSREGLLAALTALTGAAARPAET-PVSMAVDEGLGPNLDILVAEDDAV 889 Query: 884 NLTLMQQQLQALGCASPRLARDGLDALAQWQAHPADVLITDLGMPGLDGVALATRVREQQ 943 N TL++ QL ALGC R+A DG++AL W AD++ITDLGMP LDG+ L ++RE Sbjct: 890 NRTLIKHQLAALGCQRVRVAVDGVEALEMWLERRADLVITDLGMPRLDGIGLLHKLRELD 949 Query: 944 PHARIIATTAAGPGSLAQLPAALFDALLIKPASLQQMQEILTR--LIRT-TPAP-SVQAV 999 AR+IAT+A+ + + F LL KP SL ++ +L L RT +PAP + + V Sbjct: 950 LRARVIATSASVSAEI-KADVEQFSNLLQKPVSLSDLRRVLRHEMLSRTASPAPAATEPV 1008 Query: 1000 PLDPFERVVREAFRQSWPAEKEKLQQAIERGEHERVLRILHRLQGGLQAMGQDALAARSV 1059 D + ++R+AFR W E+ ++QA+ + + + R +HRLQG L A+G D L Sbjct: 1009 RSDELDALLRQAFRTEWNKERTSIEQALAGKDMDVLRRRVHRLQGALMALGADELVEELR 1068 Query: 1060 ELQRAITARESMALVACR 1077 LQ I +R AL++ R Sbjct: 1069 GLQD-IYSRADWALISIR 1085