BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4553.p (255 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777044.1| amino acid ABC transporter ATPase [Herbaspir... 399 e-109 ref|YP_001632366.1| putative branched-chain amino acid transport... 222 5e-56 ref|ZP_08404481.1| putative branched-chain amino acid transporte... 218 9e-55 emb|CAM78188.1| ABC transporter ATP-binding protein [Magnetospir... 214 7e-54 ref|ZP_01227355.1| ABC transporter [Aurantimonas manganoxydans S... 213 3e-53 >ref|YP_003777044.1| amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ65136.1| ABC-type amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 255 Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 243/255 (95%), Positives = 247/255 (96%) Query: 1 MGHEQAAVALSVKGLKKNYGGLAATRDVDLEIAAGHVHAIIGPNGAGKTTLLSLLSGALT 60 M E AA+AL VKGLKKNYGGLAATRDVDLEIAAG VHAIIGPNGAGKTTLLSLLSGAL Sbjct: 1 MVREPAALALVVKGLKKNYGGLAATRDVDLEIAAGQVHAIIGPNGAGKTTLLSLLSGALA 60 Query: 61 ADAGEVHLFGQPMHGHAEQARVAAGLVRSFQITSVFDELSVLDNLQVAVQRGQHRSYGFF 120 ADAGE+HLFGQPMHGHAEQARVAAGLVRSFQITSVFDELSVL+NLQVAVQRGQHRSYGFF Sbjct: 61 ADAGEIHLFGQPMHGHAEQARVAAGLVRSFQITSVFDELSVLENLQVAVQRGQHRSYGFF 120 Query: 121 HASASDRAAREAAMTVARRVGLEKVVHQLSSQLSHGARRRLDVGLAIACGPRVLLMDEPM 180 HASA DRAAREAAMTVARRVGLEKVVHQLSSQLSHGARRRLDVGLAIAC PRVLLMDEPM Sbjct: 121 HASAGDRAAREAAMTVARRVGLEKVVHQLSSQLSHGARRRLDVGLAIACSPRVLLMDEPM 180 Query: 181 AGMGHEESGDMIALIQSLKEELTVVLVEHDMEAVFALADRMTVLVQGAVLATGSVEEIRA 240 AGMGHEESGDMIALIQSLKEELTVVLVEHDMEAVFALADRMTVLVQGAVLATGSV+EIRA Sbjct: 181 AGMGHEESGDMIALIQSLKEELTVVLVEHDMEAVFALADRMTVLVQGAVLATGSVDEIRA 240 Query: 241 NAEVKLAYLGEEETQ 255 NAEVKLAYLGEEETQ Sbjct: 241 NAEVKLAYLGEEETQ 255 >ref|YP_001632366.1| putative branched-chain amino acid transporter, ATP-binding protein [Bordetella petrii DSM 12804] emb|CAP44098.1| putative branched-chain amino acid transporter, ATP-binding protein [Bordetella petrii] Length = 253 Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 123/243 (50%), Positives = 169/243 (69%) Query: 12 VKGLKKNYGGLAATRDVDLEIAAGHVHAIIGPNGAGKTTLLSLLSGALTADAGEVHLFGQ 71 ++ L K YG L AT + LE+ G +HA+IGPNGAGK+TL+ L++G DAG V L GQ Sbjct: 6 LEKLVKRYGELVATDNATLEVRHGEIHALIGPNGAGKSTLIDLITGLKAPDAGRVLLDGQ 65 Query: 72 PMHGHAEQARVAAGLVRSFQITSVFDELSVLDNLQVAVQRGQHRSYGFFHASASDRAARE 131 + R+ AGL R FQITS+F E++VLDNL +AVQ + R F A A D+A + Sbjct: 66 DITQMPTHRRIQAGLSRCFQITSIFREMTVLDNLLLAVQGHEGRHLDFIRARAKDKALED 125 Query: 132 AAMTVARRVGLEKVVHQLSSQLSHGARRRLDVGLAIACGPRVLLMDEPMAGMGHEESGDM 191 A +A RVGLE + +++ L+H A+R+LDV LA+A P++LL+DEPMAGMG E+S M Sbjct: 126 NACELAARVGLEAALSKIAGTLAHAAQRQLDVALALASRPKLLLLDEPMAGMGPEDSERM 185 Query: 192 IALIQSLKEELTVVLVEHDMEAVFALADRMTVLVQGAVLATGSVEEIRANAEVKLAYLGE 251 LI+ LK ++ ++L+EHDM+AVFALADRM+VLV G VL +GSV+E+R + V+ YLG Sbjct: 186 THLIRDLKRDMAILLIEHDMKAVFALADRMSVLVYGKVLVSGSVDEVRGDPRVQSVYLGN 245 Query: 252 EET 254 EE+ Sbjct: 246 EES 248 >ref|ZP_08404481.1| putative branched-chain amino acid transporter, ATP-binding protein [Hylemonella gracilis ATCC 19624] gb|EGI78342.1| putative branched-chain amino acid transporter, ATP-binding protein [Hylemonella gracilis ATCC 19624] Length = 268 Score = 218 bits (554), Expect = 9e-55, Method: Composition-based stats. Identities = 134/266 (50%), Positives = 181/266 (68%), Gaps = 13/266 (4%) Query: 1 MGHEQAAVAL-SVKGLKKNYGGLAATRDVDLEIAAGHVHAIIGPNGAGKTTLLSLLSGAL 59 M A AL V+GL K++G L AT DV L + AG +HA+IGPNGAGK+TL++L+SG Sbjct: 1 MSATTATTALFQVQGLVKHFGALRATDDVSLAVNAGEIHALIGPNGAGKSTLVNLISGLH 60 Query: 60 TADAGEVHLFGQPMHGHAEQARVAAGLVRSFQITSVFDELSVLDNLQVAVQRGQHRSYG- 118 DAG + L G + ARV AGL R FQITS+F +++VLDNL +AVQ R G Sbjct: 61 APDAGRITLDGVDLTPLPMHARVRAGLSRCFQITSIFPKVTVLDNLLLAVQSSGGRHPGG 120 Query: 119 -------FFHASASDRAAREA----AMTVARRVGLEKVVHQLSSQLSHGARRRLDVGLAI 167 H +DRA +A A+++A RVGL + +L+ L HGA+R+LDV LA+ Sbjct: 121 SGRGLPRVLHTLLADRARDDALHAQAVSLAERVGLGGRLERLAGTLPHGAQRQLDVALAL 180 Query: 168 ACGPRVLLMDEPMAGMGHEESGDMIALIQSLKEELTVVLVEHDMEAVFALADRMTVLVQG 227 A P++LL+DEPMAGMG E+S M ALIQ+LK+++ ++L+EHDM+AVFALADR++VLV G Sbjct: 181 AAEPKLLLLDEPMAGMGPEDSERMTALIQTLKQDMAILLIEHDMKAVFALADRISVLVYG 240 Query: 228 AVLATGSVEEIRANAEVKLAYLGEEE 253 VL +GSV+EIR N +V+ YLG E+ Sbjct: 241 KVLTSGSVDEIRGNPQVQAVYLGTED 266 >emb|CAM78188.1| ABC transporter ATP-binding protein [Magnetospirillum gryphiswaldense MSR-1] Length = 249 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 126/243 (51%), Positives = 166/243 (68%) Query: 10 LSVKGLKKNYGGLAATRDVDLEIAAGHVHAIIGPNGAGKTTLLSLLSGALTADAGEVHLF 69 L GL K YGG+ AT V L + GH+HA+IGPNGAGK+TL+ LLSG + ADAG +H Sbjct: 6 LHTSGLVKRYGGVIATHQVALAVERGHLHALIGPNGAGKSTLIGLLSGEMAADAGHIHFN 65 Query: 70 GQPMHGHAEQARVAAGLVRSFQITSVFDELSVLDNLQVAVQRGQHRSYGFFHASASDRAA 129 G + G R GL RSFQITS+F SVL N+ +AVQ S+ F+ + D A Sbjct: 66 GHDVTGLHVHRRARLGLARSFQITSIFKSFSVLANVVLAVQAHAGHSFRFWRPAVRDPAL 125 Query: 130 REAAMTVARRVGLEKVVHQLSSQLSHGARRRLDVGLAIACGPRVLLMDEPMAGMGHEESG 189 E A+ RVGL H ++ LSHG RR+L++ +A+A P +LL+DEPMAGMG E+ Sbjct: 126 VEPALAALERVGLADRRHDAAAALSHGERRQLELAMALAGDPAMLLLDEPMAGMGPEDGR 185 Query: 190 DMIALIQSLKEELTVVLVEHDMEAVFALADRMTVLVQGAVLATGSVEEIRANAEVKLAYL 249 M+ L+QSLK E T++LVEHDM+AVF LADR++VLV GA++A+G+ + IRA+AEV+ AYL Sbjct: 186 AMVDLLQSLKGERTILLVEHDMDAVFQLADRISVLVYGAIIASGTPDHIRADAEVRRAYL 245 Query: 250 GEE 252 GEE Sbjct: 246 GEE 248 >ref|ZP_01227355.1| ABC transporter [Aurantimonas manganoxydans SI85-9A1] gb|EAS50123.1| ABC transporter [Aurantimonas manganoxydans SI85-9A1] Length = 251 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 121/244 (49%), Positives = 168/244 (68%) Query: 10 LSVKGLKKNYGGLAATRDVDLEIAAGHVHAIIGPNGAGKTTLLSLLSGALTADAGEVHLF 69 L ++ L+K +G L T DV ++ G +HAIIGPNGAGKTTL+ LSG+L +D G VH Sbjct: 6 LDIRNLRKAFGALHVTDDVSFQVMPGELHAIIGPNGAGKTTLIHQLSGSLASDGGSVHFA 65 Query: 70 GQPMHGHAEQARVAAGLVRSFQITSVFDELSVLDNLQVAVQRGQHRSYGFFHASASDRAA 129 G+ + RV GL RSFQITS+ D +VL+N +AVQ S+ FF ++A + A Sbjct: 66 GEDITRVDMAGRVHRGLARSFQITSILDGFTVLENAAMAVQARSGSSFRFFASAARETAL 125 Query: 130 REAAMTVARRVGLEKVVHQLSSQLSHGARRRLDVGLAIACGPRVLLMDEPMAGMGHEESG 189 +AAM RV L+ + + LSHG +R+L++ +A+A G R+LL+DEP+AG GHEES Sbjct: 126 NDAAMAALARVRLDDRAERRAGSLSHGEKRQLEIAIALATGARLLLLDEPLAGTGHEESA 185 Query: 190 DMIALIQSLKEELTVVLVEHDMEAVFALADRMTVLVQGAVLATGSVEEIRANAEVKLAYL 249 ++AL+ LK T+VL+EHDM+AVFALADR++VLV G ++ATG+ EE+R + EV+ AYL Sbjct: 186 VLVALMAELKTTHTIVLIEHDMDAVFALADRVSVLVYGRLIATGTAEEVRVHPEVRTAYL 245 Query: 250 GEEE 253 GEEE Sbjct: 246 GEEE 249