BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4552.p (236 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777043.1| amino acid ABC transporter ATPase [Herbaspir... 454 e-126 ref|YP_004234564.1| ABC transporter-like protein [Acidovorax ave... 320 8e-86 dbj|BAC65303.1| ABC transporter ATP-binding protein [Pseudomonas... 320 1e-85 ref|YP_551896.1| ABC transporter related [Polaromonas sp. JS666]... 318 4e-85 emb|CBA31463.1| hypothetical protein Csp_F37660 [Curvibacter put... 309 3e-82 >ref|YP_003777043.1| amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ65135.1| ABC-type amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 236 Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats. Identities = 235/236 (99%), Positives = 236/236 (100%) Query: 1 MSALLEVEGLTGGYGASQVLFGIDMQVREGEVVTLLGRNGMGKTTTLRTILGLNRPTGGV 60 MSALLEVEGLTGGYGASQVLFGIDMQVREGEVVTLLGRNGMGKTTTLRTILGLNRPTGGV Sbjct: 1 MSALLEVEGLTGGYGASQVLFGIDMQVREGEVVTLLGRNGMGKTTTLRTILGLNRPTGGV 60 Query: 61 VRFRGEAIHSASADAIARRGMAIVPEGRQIFKNLSVEENLSAFAARRNGRDNPWTLEKIY 120 VRFRGEAIHSASADAIARRGMAIVPEGRQIFKNLSVEENLSAFAARRNGRDNPWTLEKIY Sbjct: 61 VRFRGEAIHSASADAIARRGMAIVPEGRQIFKNLSVEENLSAFAARRNGRDNPWTLEKIY 120 Query: 121 QQFPRLKERRHNGGGQLSGGEQQMLAIGRALMTNPHLLILDEATEGLAPLVREEIWACLK 180 QQFPRLKERRHNGGGQLSGGEQQMLAIGRALMTNPHLLILDEATEGLAPLVREEIW+CLK Sbjct: 121 QQFPRLKERRHNGGGQLSGGEQQMLAIGRALMTNPHLLILDEATEGLAPLVREEIWSCLK 180 Query: 181 ALREYGLTIIVIDKYIKRLIGFADQHTILEKGKVVWQGDSAQLSVQTELWDQYLSV 236 ALREYGLTIIVIDKYIKRLIGFADQHTILEKGKVVWQGDSAQLSVQTELWDQYLSV Sbjct: 181 ALREYGLTIIVIDKYIKRLIGFADQHTILEKGKVVWQGDSAQLSVQTELWDQYLSV 236 >ref|YP_004234564.1| ABC transporter-like protein [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX45997.1| ABC transporter related protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 236 Score = 320 bits (821), Expect = 8e-86, Method: Composition-based stats. Identities = 163/236 (69%), Positives = 189/236 (80%) Query: 1 MSALLEVEGLTGGYGASQVLFGIDMQVREGEVVTLLGRNGMGKTTTLRTILGLNRPTGGV 60 MSALLEVEGL YG+SQVLFGI +R GEV TLLGRNGMGKTTT+R +LGL R G Sbjct: 1 MSALLEVEGLEAAYGSSQVLFGIAFDIRAGEVATLLGRNGMGKTTTVRALLGLTRAKAGS 60 Query: 61 VRFRGEAIHSASADAIARRGMAIVPEGRQIFKNLSVEENLSAFAARRNGRDNPWTLEKIY 120 VRFRGE I + D IAR G+A+VPEGRQIF NLSV ENL AFAARRNG +PWTL++++ Sbjct: 61 VRFRGERIERLAPDRIARMGLAVVPEGRQIFPNLSVRENLVAFAARRNGAADPWTLDRVH 120 Query: 121 QQFPRLKERRHNGGGQLSGGEQQMLAIGRALMTNPHLLILDEATEGLAPLVREEIWACLK 180 FPRL ER + GGQLSGGEQQMLAIGRALMTNPHLL+LDEATEGLAPL+REEIW CL Sbjct: 121 ALFPRLAERASHMGGQLSGGEQQMLAIGRALMTNPHLLVLDEATEGLAPLIREEIWRCLD 180 Query: 181 ALREYGLTIIVIDKYIKRLIGFADQHTILEKGKVVWQGDSAQLSVQTELWDQYLSV 236 ALR G TI+VIDKY++RL+ AD+HTI+E+G+VVWQGDS L+ LW +Y+ V Sbjct: 181 ALRAQGQTILVIDKYVRRLVRLADRHTIIERGRVVWQGDSGALAADPALWQRYVGV 236 >dbj|BAC65303.1| ABC transporter ATP-binding protein [Pseudomonas fluorescens] Length = 236 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 157/236 (66%), Positives = 185/236 (78%) Query: 1 MSALLEVEGLTGGYGASQVLFGIDMQVREGEVVTLLGRNGMGKTTTLRTILGLNRPTGGV 60 MSA+LEV + YG SQVLFG+ +Q+REGEV TLLGRNGMGKTT++R+ILGL G Sbjct: 1 MSAILEVSNVETAYGESQVLFGVSLQIREGEVSTLLGRNGMGKTTSVRSILGLTPVHSGS 60 Query: 61 VRFRGEAIHSASADAIARRGMAIVPEGRQIFKNLSVEENLSAFAARRNGRDNPWTLEKIY 120 +RFRGE I SAD I R+G+A+VPEGR IF NL+V+ENL AFA RN PWTLEKIY Sbjct: 61 IRFRGELIERKSADVIGRKGIAVVPEGRHIFPNLTVKENLVAFACNRNKASEPWTLEKIY 120 Query: 121 QQFPRLKERRHNGGGQLSGGEQQMLAIGRALMTNPHLLILDEATEGLAPLVREEIWACLK 180 FPRL ER N G QLSGGEQQMLAIGRALMTNPHLLILDEATEGLAPL+R+EIW CL Sbjct: 121 NFFPRLAERERNMGSQLSGGEQQMLAIGRALMTNPHLLILDEATEGLAPLIRDEIWTCLH 180 Query: 181 ALREYGLTIIVIDKYIKRLIGFADQHTILEKGKVVWQGDSAQLSVQTELWDQYLSV 236 AL++ G T++VIDKY+++LI AD HTI+EKG+V WQG S +LS+ LW +YL V Sbjct: 181 ALKKSGQTVLVIDKYVEKLIALADHHTIIEKGQVAWQGSSKELSLDRSLWQRYLGV 236 >ref|YP_551896.1| ABC transporter related [Polaromonas sp. JS666] gb|ABE46998.1| ABC transporter related [Polaromonas sp. JS666] Length = 236 Score = 318 bits (815), Expect = 4e-85, Method: Composition-based stats. Identities = 159/236 (67%), Positives = 189/236 (80%) Query: 1 MSALLEVEGLTGGYGASQVLFGIDMQVREGEVVTLLGRNGMGKTTTLRTILGLNRPTGGV 60 MSA+LEV G+ GYG +VLFGID+++ +GEV TLLGRNGMGKTT++R+ILGL G Sbjct: 1 MSAILEVAGMESGYGTCRVLFGIDLKINDGEVSTLLGRNGMGKTTSVRSILGLTPVRTGT 60 Query: 61 VRFRGEAIHSASADAIARRGMAIVPEGRQIFKNLSVEENLSAFAARRNGRDNPWTLEKIY 120 VRFRGE IH S +AI +G+A+VPEGRQIF NL+V+ENL AFAA RNG PWTLEKIY Sbjct: 61 VRFRGEQIHRLSPNAIGSKGIAVVPEGRQIFPNLTVKENLVAFAANRNGTREPWTLEKIY 120 Query: 121 QQFPRLKERRHNGGGQLSGGEQQMLAIGRALMTNPHLLILDEATEGLAPLVREEIWACLK 180 FPRL+ER N G +LSGGEQQMLAIGRALMTNPHLLILDEATEGLAPL+REEIW CL Sbjct: 121 AFFPRLQERERNMGVELSGGEQQMLAIGRALMTNPHLLILDEATEGLAPLIREEIWQCLA 180 Query: 181 ALREYGLTIIVIDKYIKRLIGFADQHTILEKGKVVWQGDSAQLSVQTELWDQYLSV 236 LR G TI+VIDKY++RLI AD+HTI+E+GKV W+G SA+L +W++YL V Sbjct: 181 TLRRSGQTILVIDKYVERLIALADRHTIIERGKVAWEGTSAELGADKTIWERYLGV 236 >emb|CBA31463.1| hypothetical protein Csp_F37660 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 238 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 153/233 (65%), Positives = 182/233 (78%) Query: 4 LLEVEGLTGGYGASQVLFGIDMQVREGEVVTLLGRNGMGKTTTLRTILGLNRPTGGVVRF 63 LL+++GL YG SQVLFG+DMQ++ G TLLGRNGMGKTTT+R+ILGL P G +RF Sbjct: 6 LLDIQGLETAYGNSQVLFGLDMQLQAGTTSTLLGRNGMGKTTTVRSILGLTPPRSGSIRF 65 Query: 64 RGEAIHSASADAIARRGMAIVPEGRQIFKNLSVEENLSAFAARRNGRDNPWTLEKIYQQF 123 RGE I S D IAR G+A+VPEGRQIF NL+V+ENL AFAARRN PWTLE+IY F Sbjct: 66 RGERIEGLSPDRIARMGVALVPEGRQIFPNLTVQENLIAFAARRNASAEPWTLERIYHLF 125 Query: 124 PRLKERRHNGGGQLSGGEQQMLAIGRALMTNPHLLILDEATEGLAPLVREEIWACLKALR 183 P LK+R N G QLSGGEQQMLAIGRALMTNPHLLILDEATEGLAPL+RE+IW CL LR Sbjct: 126 PVLKQRARNMGNQLSGGEQQMLAIGRALMTNPHLLILDEATEGLAPLIREDIWRCLDTLR 185 Query: 184 EYGLTIIVIDKYIKRLIGFADQHTILEKGKVVWQGDSAQLSVQTELWDQYLSV 236 G +++VIDKY++RLI A HTI+E+G+ VW GDS L+ Q ELW +Y+ + Sbjct: 186 AQGQSVLVIDKYVQRLIALAGHHTIMERGRAVWSGDSTTLAAQPELWHRYVGI 238