BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4539.p         (126 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777022.1| transmembrane protein [Herbaspirillum serope...   197   5e-49
ref|YP_004751789.1| hypothetical protein CFU_1134 [Collimonas fu...   173   1e-41
ref|YP_001098912.1| hypothetical protein HEAR0584 [Herminiimonas...   171   4e-41
ref|YP_001352251.1| hypothetical protein mma_0561 [Janthinobacte...   167   3e-40
ref|ZP_08274613.1| hypothetical protein IMCC9480_3216 [Oxalobact...   147   5e-34

>ref|YP_003777022.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ65114.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
          Length = 126

 Score =  197 bits (500), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 121/126 (96%), Positives = 122/126 (96%)

Query: 1   MTLSYWCILIAGLMPVFTIAVAKYGRRDFDNAEPRAWLDKQTGVRRRADYAHRNHFEAFP 60
           MTLSYWCILIAGLMPV TIAVAKYGRRDFDNAEPRAWLDKQTGVRRRADYAHRNHFEAFP
Sbjct: 1   MTLSYWCILIAGLMPVLTIAVAKYGRRDFDNAEPRAWLDKQTGVRRRADYAHRNHFEAFP 60

Query: 61  FFAAAVLVAQQVGAAQGQIDSAALVFIAARILYTVLYLTDKPSARSAVWIIGYLSVIALF 120
           FFAAAVLVAQQVGA QGQID AALVFIAARILYT LYL+DKPSARSAVWIIGYLSVIALF
Sbjct: 61  FFAAAVLVAQQVGAPQGQIDIAALVFIAARILYTALYLSDKPSARSAVWIIGYLSVIALF 120

Query: 121 VIAARA 126
           VIAARA
Sbjct: 121 VIAARA 126


>ref|YP_004751789.1| hypothetical protein CFU_1134 [Collimonas fungivorans Ter331]
 gb|AEK60966.1| hypothetical protein CFU_1134 [Collimonas fungivorans Ter331]
          Length = 127

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 84/124 (67%), Positives = 104/124 (83%)

Query: 1   MTLSYWCILIAGLMPVFTIAVAKYGRRDFDNAEPRAWLDKQTGVRRRADYAHRNHFEAFP 60
           MT++YWC+LIAGLMP+FT+  AK GR DFDN+EPRAWL+KQ+G+RRRADYAHRNHFEAFP
Sbjct: 1   MTIAYWCVLIAGLMPLFTVVFAKRGRPDFDNSEPRAWLEKQSGLRRRADYAHRNHFEAFP 60

Query: 61  FFAAAVLVAQQVGAAQGQIDSAALVFIAARILYTVLYLTDKPSARSAVWIIGYLSVIALF 120
           FFAA V++AQQV A Q  ++  A +FI AR++YT+LYLTD+PS RSA W I +LS I LF
Sbjct: 61  FFAAGVIIAQQVHAPQNMLNLLAALFIVARVVYTILYLTDRPSLRSAAWSIAFLSAIGLF 120

Query: 121 VIAA 124
           V+A 
Sbjct: 121 VLAG 124


>ref|YP_001098912.1| hypothetical protein HEAR0584 [Herminiimonas arsenicoxydans]
 emb|CAL60785.1| conserved hypothetical protein; putative exported protein
           [Herminiimonas arsenicoxydans]
          Length = 128

 Score =  171 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 87/124 (70%), Positives = 102/124 (82%)

Query: 1   MTLSYWCILIAGLMPVFTIAVAKYGRRDFDNAEPRAWLDKQTGVRRRADYAHRNHFEAFP 60
           M LSYWC+L AG+MPV T+A+AK+G+RDFDN+EPR WL+KQ GVRRRAD AHRNHFEAFP
Sbjct: 1   MNLSYWCVLAAGVMPVVTVAIAKWGKRDFDNSEPRRWLEKQEGVRRRADAAHRNHFEAFP 60

Query: 61  FFAAAVLVAQQVGAAQGQIDSAALVFIAARILYTVLYLTDKPSARSAVWIIGYLSVIALF 120
           FFAA VLVAQQ+ A Q  I+  A VFI ARI+YTVLYLT+  + RS  W +GYL VIALF
Sbjct: 61  FFAAGVLVAQQLNAPQDTINMLAGVFIIARIVYTVLYLTNHATLRSLSWTVGYLCVIALF 120

Query: 121 VIAA 124
           +IAA
Sbjct: 121 LIAA 124


>ref|YP_001352251.1| hypothetical protein mma_0561 [Janthinobacterium sp. Marseille]
 gb|ABR90324.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 128

 Score =  167 bits (424), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 80/122 (65%), Positives = 103/122 (84%)

Query: 1   MTLSYWCILIAGLMPVFTIAVAKYGRRDFDNAEPRAWLDKQTGVRRRADYAHRNHFEAFP 60
           M LSYWC+LIAG++P  T+A+AK+G+RDFDN+EPR WL++Q G+RRRAD AHRNHFEAFP
Sbjct: 1   MNLSYWCVLIAGILPAATVAIAKWGKRDFDNSEPRRWLEQQEGLRRRADSAHRNHFEAFP 60

Query: 61  FFAAAVLVAQQVGAAQGQIDSAALVFIAARILYTVLYLTDKPSARSAVWIIGYLSVIALF 120
           FFAA VLVAQQ+ A Q  I+  A+ FIAAR++YT+LYLTD+ + RS  W+IGYL+VI LF
Sbjct: 61  FFAAGVLVAQQLNAPQDSINMLAVAFIAARLVYTLLYLTDRATLRSVTWLIGYLAVIGLF 120

Query: 121 VI 122
           ++
Sbjct: 121 LL 122


>ref|ZP_08274613.1| hypothetical protein IMCC9480_3216 [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF31912.1| hypothetical protein IMCC9480_3216 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 124

 Score =  147 bits (371), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 85/124 (68%), Positives = 103/124 (83%)

Query: 1   MTLSYWCILIAGLMPVFTIAVAKYGRRDFDNAEPRAWLDKQTGVRRRADYAHRNHFEAFP 60
           MT++YWC+LIAGLMPV T A+AK G R +DNAEPR +++KQTG  RRADYAHRNHFEAFP
Sbjct: 1   MTIAYWCVLIAGLMPVLTTAIAKAGLRGYDNAEPRGFMEKQTGFHRRADYAHRNHFEAFP 60

Query: 61  FFAAAVLVAQQVGAAQGQIDSAALVFIAARILYTVLYLTDKPSARSAVWIIGYLSVIALF 120
           FFAAAVL+A+Q+ A   Q+D  A+ FIAARILYTVLY+ +KP+ RS  W++GY  VIALF
Sbjct: 61  FFAAAVLIAEQLDANPLQVDGLAMAFIAARILYTVLYVANKPTLRSLAWVVGYGCVIALF 120

Query: 121 VIAA 124
           VIAA
Sbjct: 121 VIAA 124