BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4528.p         (158 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777011.1| hypothetical protein Hsero_3625 [Herbaspiril...   184   4e-45
ref|ZP_08276494.1| hypothetical protein IMCC9480_2564 [Oxalobact...   122   3e-26
ref|YP_001098920.1| hypothetical protein HEAR0592 [Herminiimonas...   119   2e-25
ref|YP_001352258.1| hypothetical protein mma_0568 [Janthinobacte...   118   2e-25
ref|YP_004067878.1| hypothetical protein PSM_A0779 [Pseudoaltero...   113   1e-23

>ref|YP_003777011.1| hypothetical protein Hsero_3625 [Herbaspirillum seropedicae SmR1]
 gb|ADJ65103.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 140

 Score =  184 bits (467), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 126/140 (90%), Positives = 132/140 (94%)

Query: 19  MSMINLTTPALLFPATSLLLLAYTNRFLVLAQLIRNLQNQGQNDERGLVIRQILNLRKRI 78
           MSMINLTTPALLFPATSLLLLAYTNRFLVLAQLIRNLQ+QGQNDERGLVIRQILNLRKRI
Sbjct: 1   MSMINLTTPALLFPATSLLLLAYTNRFLVLAQLIRNLQHQGQNDERGLVIRQILNLRKRI 60

Query: 79  VLTRYMQALGVSSFIMCAVSMYLIFVDFNRGAEVFFGISLMLLVASLLVSLWEIMISTRA 138
           VLTRYMQALGVSSFIMCA+SM+LIFVD NR AEV FG+SL LLV SLLVSLWEIMISTRA
Sbjct: 61  VLTRYMQALGVSSFIMCAISMFLIFVDRNRAAEVLFGLSLFLLVLSLLVSLWEIMISTRA 120

Query: 139 IEITLEDMAQKLEKRGILVE 158
           IEITLEDMA KLE+  I+VE
Sbjct: 121 IEITLEDMAHKLERAPIVVE 140


>ref|ZP_08276494.1| hypothetical protein IMCC9480_2564 [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF30032.1| hypothetical protein IMCC9480_2564 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 133

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 86/131 (65%), Positives = 104/131 (79%)

Query: 22  INLTTPALLFPATSLLLLAYTNRFLVLAQLIRNLQNQGQNDERGLVIRQILNLRKRIVLT 81
           +NLTTPALLFPA SLLLLAYTNRF+VLAQLIR+L  Q ++    +VIRQI NLR RI L 
Sbjct: 1   MNLTTPALLFPAISLLLLAYTNRFVVLAQLIRHLHVQYKDKREDVVIRQIANLRIRITLI 60

Query: 82  RYMQALGVSSFIMCAVSMYLIFVDFNRGAEVFFGISLMLLVASLLVSLWEIMISTRAIEI 141
           R MQ+ GVSSFI+C+VSM L+FVD    A+  FG+SL+LLV SL+ SLWEI IST+AIEI
Sbjct: 61  RRMQSFGVSSFILCSVSMLLVFVDMILPAQYVFGLSLLLLVLSLVFSLWEIAISTKAIEI 120

Query: 142 TLEDMAQKLEK 152
            LED+ Q L++
Sbjct: 121 ELEDIEQNLKR 131


>ref|YP_001098920.1| hypothetical protein HEAR0592 [Herminiimonas arsenicoxydans]
 emb|CAL60793.1| conserved hypothetical protein; putative exported protein
           [Herminiimonas arsenicoxydans]
          Length = 133

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 83/131 (63%), Positives = 103/131 (78%)

Query: 22  INLTTPALLFPATSLLLLAYTNRFLVLAQLIRNLQNQGQNDERGLVIRQILNLRKRIVLT 81
           ++LTTPALLFPA SLLLLAYTNRFLV AQLIR L  + QN  R  VIRQI NLR+R++L 
Sbjct: 1   MDLTTPALLFPAISLLLLAYTNRFLVTAQLIRQLHVKYQNGAREEVIRQISNLRQRVLLI 60

Query: 82  RYMQALGVSSFIMCAVSMYLIFVDFNRGAEVFFGISLMLLVASLLVSLWEIMISTRAIEI 141
           R MQA+GV SF++CA+SM L+F++    A+V FG+S+ +LV SLLVSL EI IST+AIEI
Sbjct: 61  RRMQAMGVMSFLLCALSMLLVFIELIVIAKVIFGLSIFMLVLSLLVSLHEITISTKAIEI 120

Query: 142 TLEDMAQKLEK 152
            +EDM Q L +
Sbjct: 121 EMEDMEQSLRQ 131


>ref|YP_001352258.1| hypothetical protein mma_0568 [Janthinobacterium sp. Marseille]
 gb|ABR91233.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 134

 Score =  118 bits (296), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 79/132 (59%), Positives = 104/132 (78%)

Query: 22  INLTTPALLFPATSLLLLAYTNRFLVLAQLIRNLQNQGQNDERGLVIRQILNLRKRIVLT 81
           ++LTTPALLFPA SLLLLAYTNRFLV+AQLIR L  + Q     +V+RQI NLR R++L 
Sbjct: 1   MDLTTPALLFPAISLLLLAYTNRFLVIAQLIRQLHVKYQERAHDVVLRQIANLRVRVMLI 60

Query: 82  RYMQALGVSSFIMCAVSMYLIFVDFNRGAEVFFGISLMLLVASLLVSLWEIMISTRAIEI 141
           R MQ +GV +FI+CA+SM+L+F+     A+V FG S+ +LV SLLVSL+EI+IST+AIEI
Sbjct: 61  RRMQEMGVGAFILCALSMFLVFIKLIFIAQVIFGFSIFMLVLSLLVSLYEIVISTKAIEI 120

Query: 142 TLEDMAQKLEKR 153
            +EDM Q L+++
Sbjct: 121 EMEDMVQSLQEQ 132


>ref|YP_004067878.1| hypothetical protein PSM_A0779 [Pseudoalteromonas sp. SM9913]
 gb|ADT67727.1| hypothetical protein PSM_A0779 [Pseudoalteromonas sp. SM9913]
          Length = 149

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 73/128 (57%), Positives = 91/128 (71%)

Query: 22  INLTTPALLFPATSLLLLAYTNRFLVLAQLIRNLQNQGQNDERGLVIRQILNLRKRIVLT 81
           + LTTP LLFPA SLLLLAYTNRFLVLAQLIR L  +     R +V+ QI NLRKRI L 
Sbjct: 1   MTLTTPGLLFPAISLLLLAYTNRFLVLAQLIRELNAREGESIRPVVVAQITNLRKRIKLI 60

Query: 82  RYMQALGVSSFIMCAVSMYLIFVDFNRGAEVFFGISLMLLVASLLVSLWEIMISTRAIEI 141
           R MQ  GV+SF++C +SM+ +F++FN    + FG+SL  L  SLL SL+EI IS  AIEI
Sbjct: 61  RTMQVYGVASFLLCTLSMFALFIEFNTTGIILFGVSLSCLSLSLLTSLFEIHISCDAIEI 120

Query: 142 TLEDMAQK 149
            L+++  K
Sbjct: 121 ELQNIENK 128