BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4527.p (488 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777010.1| xanthine/uracil permease [Herbaspirillum ser... 667 0.0 ref|YP_004751800.1| Uracil permease [Collimonas fungivorans Ter3... 621 e-176 ref|YP_001856378.1| uracil-xanthine permease [Burkholderia phyma... 590 e-166 ref|YP_004226664.1| uracil-xanthine permease [Burkholderia sp. C... 581 e-164 ref|YP_003905460.1| uracil-xanthine permease [Burkholderia sp. C... 575 e-162 >ref|YP_003777010.1| xanthine/uracil permease [Herbaspirillum seropedicae SmR1] gb|ADJ65102.1| xanthine/uracil permease protein [Herbaspirillum seropedicae SmR1] Length = 431 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 417/431 (96%), Positives = 425/431 (98%) Query: 58 MSGSYFPQWRLRQSTNDGQGAVIAADERLPAPQTLAMGVQHVVAMFGSTVLAPLLMGFDP 117 MSGSYFPQWRLRQSTNDGQGAVIAADERLPAPQTLAMGVQHVVAMFGSTVLAPLLMGFDP Sbjct: 1 MSGSYFPQWRLRQSTNDGQGAVIAADERLPAPQTLAMGVQHVVAMFGSTVLAPLLMGFDP 60 Query: 118 NLAILMSGVGTLLFFLMVGGRVPSYLGSSFSFIGLVIAVTGYAGSGPNANLGVALGGIIA 177 NLAILMSGVGTLLFFL+VGGRVPSYLGSSFSFIGLVIAVTGYAGSGPN NLGVALGGIIA Sbjct: 61 NLAILMSGVGTLLFFLLVGGRVPSYLGSSFSFIGLVIAVTGYAGSGPNTNLGVALGGIIA 120 Query: 178 CGAVYAVIGLIVSGVGTRWIESLMPPVVTGAVVAVIGLNLAPIAVKGVSGSSFDSWMALA 237 CGAVYAVIGLIV+GVGTRWIESLMPPVVTGAVVAVIGLNLAPIAVKGVSGSSFDSWMALA Sbjct: 121 CGAVYAVIGLIVAGVGTRWIESLMPPVVTGAVVAVIGLNLAPIAVKGVSGSSFDSWMALA 180 Query: 238 TILCVGFVAVFTRGMLQRLLILIGLLLAYVLYAVLTNGMGLGKPIDFSTVANAAWFGLPH 297 TILCVG VAVFTRGMLQRLLIL+GLLLAYVLYAVLTNG+GLGKPIDFSTVANAAWFG+PH Sbjct: 181 TILCVGGVAVFTRGMLQRLLILVGLLLAYVLYAVLTNGLGLGKPIDFSTVANAAWFGVPH 240 Query: 298 FAAPVFQGSAMALLAPVAIILVAENLGHIKAVSAMTGQNLDRYIGRAFIGDGLATMLSGS 357 FAAPVF AMALLAPVAIILVAENLGHIKAVSAMTGQNLDRYIGRAF+GDGLATMLSGS Sbjct: 241 FAAPVFHAGAMALLAPVAIILVAENLGHIKAVSAMTGQNLDRYIGRAFVGDGLATMLSGS 300 Query: 358 VGGTGVTTYAENIGVMAVTKIYSTLVFVVAAVIAILLGFSPKFGAVILTIPGAVLGGVSI 417 VGGTGVTTYAENIGVMAVTKIYSTLVFVVAAVIAILLGFSPKFGAVILTIPGAVLGGVSI Sbjct: 301 VGGTGVTTYAENIGVMAVTKIYSTLVFVVAAVIAILLGFSPKFGAVILTIPGAVLGGVSI 360 Query: 418 VVFGLITVSGARIWVENKVDFSNNTNLIVAAVTLVLGAGDFTLKMGGFALGGIGTATFGA 477 VVFGLIT+SGARIWVENKVDFSNNTNLIVAAVTLVLGAGDFTLK+GGFALGGIGTATFGA Sbjct: 361 VVFGLITISGARIWVENKVDFSNNTNLIVAAVTLVLGAGDFTLKLGGFALGGIGTATFGA 420 Query: 478 IILHALLKRRG 488 IILHALLKRR Sbjct: 421 IILHALLKRRA 431 >ref|YP_004751800.1| Uracil permease [Collimonas fungivorans Ter331] gb|AEK60977.1| Uracil permease [Collimonas fungivorans Ter331] Length = 432 Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats. Identities = 367/430 (85%), Positives = 400/430 (93%) Query: 58 MSGSYFPQWRLRQSTNDGQGAVIAADERLPAPQTLAMGVQHVVAMFGSTVLAPLLMGFDP 117 M+ SYFP+WRLR ST DGQG VIAADERLP PQT AMGVQHVVAMFGSTVLAPLLMGFDP Sbjct: 1 MAASYFPKWRLRASTADGQGQVIAADERLPWPQTFAMGVQHVVAMFGSTVLAPLLMGFDP 60 Query: 118 NLAILMSGVGTLLFFLMVGGRVPSYLGSSFSFIGLVIAVTGYAGSGPNANLGVALGGIIA 177 NLAI MSG+GTLLFF++VGGRVPSYLGSSFSFIGLVIAV+ Y G G N NLGVALGGIIA Sbjct: 61 NLAIFMSGIGTLLFFVLVGGRVPSYLGSSFSFIGLVIAVSAYGGHGLNPNLGVALGGIIA 120 Query: 178 CGAVYAVIGLIVSGVGTRWIESLMPPVVTGAVVAVIGLNLAPIAVKGVSGSSFDSWMALA 237 CG +YA+IGL+V +GTRWIE+LMPPVVTGAVVAVIGLNLAPIA+KGVSG++FD+WMAL Sbjct: 121 CGVLYALIGLLVMAIGTRWIETLMPPVVTGAVVAVIGLNLAPIAIKGVSGNNFDAWMALG 180 Query: 238 TILCVGFVAVFTRGMLQRLLILIGLLLAYVLYAVLTNGMGLGKPIDFSTVANAAWFGLPH 297 T+LCVG VAVF RGMLQRLLIL+GL+LAYV+YAVLTNG GLGKPIDF VA AAWFG+PH Sbjct: 181 TVLCVGGVAVFARGMLQRLLILVGLMLAYVIYAVLTNGAGLGKPIDFGMVAQAAWFGIPH 240 Query: 298 FAAPVFQGSAMALLAPVAIILVAENLGHIKAVSAMTGQNLDRYIGRAFIGDGLATMLSGS 357 F+APVF+ AMALLAPVAIILVAENLGHIKAV+AMTGQNLD+Y+GRAF+GDGLAT++SGS Sbjct: 241 FSAPVFKADAMALLAPVAIILVAENLGHIKAVAAMTGQNLDKYMGRAFVGDGLATIVSGS 300 Query: 358 VGGTGVTTYAENIGVMAVTKIYSTLVFVVAAVIAILLGFSPKFGAVILTIPGAVLGGVSI 417 VGGTGVTTYAENIGVMAVTKIYSTLVFVVAA +AI+LGFSPKFGAVI TIPGAVLGGVSI Sbjct: 301 VGGTGVTTYAENIGVMAVTKIYSTLVFVVAACLAIILGFSPKFGAVIQTIPGAVLGGVSI 360 Query: 418 VVFGLITVSGARIWVENKVDFSNNTNLIVAAVTLVLGAGDFTLKMGGFALGGIGTATFGA 477 VVFGLI VSGARIWVENKVDFSNN NLIVAAVTLVLGAGDFTLK+G F+LGGIGTATFGA Sbjct: 361 VVFGLIAVSGARIWVENKVDFSNNRNLIVAAVTLVLGAGDFTLKLGQFSLGGIGTATFGA 420 Query: 478 IILHALLKRR 487 IILHALL+ R Sbjct: 421 IILHALLRER 430 >ref|YP_001856378.1| uracil-xanthine permease [Burkholderia phymatum STM815] gb|ACC69332.1| uracil-xanthine permease [Burkholderia phymatum STM815] Length = 435 Score = 590 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 350/431 (81%), Positives = 390/431 (90%), Gaps = 2/431 (0%) Query: 58 MSGSYFPQWRLRQSTNDGQGAVIAADERLPAPQTLAMGVQHVVAMFGSTVLAPLLMGFDP 117 M+ SYFP+WR++ + +G+ V+ DERLP PQ AMGVQHVVAMFGSTVLAPLLMGFDP Sbjct: 1 MADSYFPRWRVQPKSVEGR--VVNIDERLPWPQMFAMGVQHVVAMFGSTVLAPLLMGFDP 58 Query: 118 NLAILMSGVGTLLFFLMVGGRVPSYLGSSFSFIGLVIAVTGYAGSGPNANLGVALGGIIA 177 NL I MSG+GTLLFF++VGGRVPSYLGSSF+FIGLVIA+TGY G GPN N+ VALGGIIA Sbjct: 59 NLCIFMSGIGTLLFFVLVGGRVPSYLGSSFAFIGLVIAITGYTGHGPNMNIPVALGGIIA 118 Query: 178 CGAVYAVIGLIVSGVGTRWIESLMPPVVTGAVVAVIGLNLAPIAVKGVSGSSFDSWMALA 237 CG Y VIGLIVS +GT WIE+LMPPVVTG++VAVIGLNLAPIAVKGVSGS+FDS+MAL Sbjct: 119 CGVAYVVIGLIVSAIGTAWIETLMPPVVTGSIVAVIGLNLAPIAVKGVSGSAFDSYMALV 178 Query: 238 TILCVGFVAVFTRGMLQRLLILIGLLLAYVLYAVLTNGMGLGKPIDFSTVANAAWFGLPH 297 T+LCVG VAVF GMLQRLLIL+GLL+AY +YAV+TNGMG+GKPIDFS VANA WFG+PH Sbjct: 179 TVLCVGAVAVFAHGMLQRLLILVGLLIAYAIYAVVTNGMGMGKPIDFSIVANAPWFGMPH 238 Query: 298 FAAPVFQGSAMALLAPVAIILVAENLGHIKAVSAMTGQNLDRYIGRAFIGDGLATMLSGS 357 F APVF G AMALLAPVA+ILVAENLGHIKAVSAMTGQNLD YIGRAFIGDGLAT+LSG Sbjct: 239 FMAPVFSGQAMALLAPVAVILVAENLGHIKAVSAMTGQNLDGYIGRAFIGDGLATVLSGF 298 Query: 358 VGGTGVTTYAENIGVMAVTKIYSTLVFVVAAVIAILLGFSPKFGAVILTIPGAVLGGVSI 417 GGTGVTTYAENIGVMAVTKIYSTLVFV+AA+IA++LGFSPKFGAVI TIPG VLGGVSI Sbjct: 299 AGGTGVTTYAENIGVMAVTKIYSTLVFVIAALIALVLGFSPKFGAVIQTIPGPVLGGVSI 358 Query: 418 VVFGLITVSGARIWVENKVDFSNNTNLIVAAVTLVLGAGDFTLKMGGFALGGIGTATFGA 477 VVFGLI V+GARIWV NKV+FS+N NLIVAAVTLVLGAGDF+LK GGFALGGIGTATFGA Sbjct: 359 VVFGLIAVTGARIWVVNKVNFSDNRNLIVAAVTLVLGAGDFSLKFGGFALGGIGTATFGA 418 Query: 478 IILHALLKRRG 488 IIL+ALL+R+G Sbjct: 419 IILYALLRRKG 429 >ref|YP_004226664.1| uracil-xanthine permease [Burkholderia sp. CCGE1001] gb|ADX53604.1| uracil-xanthine permease [Burkholderia sp. CCGE1001] Length = 435 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 352/430 (81%), Positives = 391/430 (90%), Gaps = 2/430 (0%) Query: 58 MSGSYFPQWRLRQSTNDGQGAVIAADERLPAPQTLAMGVQHVVAMFGSTVLAPLLMGFDP 117 M+ SYFP+WR Q + +G ++ DERL PQ AMG+QHVVAMFGSTVLAPLLMGFDP Sbjct: 1 MADSYFPRWR--QQPDAVEGRIVGTDERLAWPQMFAMGIQHVVAMFGSTVLAPLLMGFDP 58 Query: 118 NLAILMSGVGTLLFFLMVGGRVPSYLGSSFSFIGLVIAVTGYAGSGPNANLGVALGGIIA 177 NL I MSG+GTLLFF++VGGRVPSYLGSSF+FIGLVIAVTGY G GPN N+ VALGGIIA Sbjct: 59 NLCIFMSGIGTLLFFVLVGGRVPSYLGSSFAFIGLVIAVTGYGGHGPNLNIPVALGGIIA 118 Query: 178 CGAVYAVIGLIVSGVGTRWIESLMPPVVTGAVVAVIGLNLAPIAVKGVSGSSFDSWMALA 237 CGAVYAVIGLIVS VGTRWIE+LMPPVVTGA+V VIGLNLAPIAV+GVSGS+FDSWMAL Sbjct: 119 CGAVYAVIGLIVSAVGTRWIETLMPPVVTGAIVCVIGLNLAPIAVRGVSGSNFDSWMALV 178 Query: 238 TILCVGFVAVFTRGMLQRLLILIGLLLAYVLYAVLTNGMGLGKPIDFSTVANAAWFGLPH 297 T+LCVG VAVF RGMLQRLLIL+GLL+AYV+YAV+TNG+G+GKPIDFS VANAAWFG+PH Sbjct: 179 TVLCVGAVAVFARGMLQRLLILVGLLMAYVIYAVVTNGLGMGKPIDFSIVANAAWFGMPH 238 Query: 298 FAAPVFQGSAMALLAPVAIILVAENLGHIKAVSAMTGQNLDRYIGRAFIGDGLATMLSGS 357 F APVF AM LLAP+A+ILVAENLGHIKAVSAMTGQNLDRYIGRAF+GDGLAT++SG Sbjct: 239 FTAPVFNMQAMTLLAPIAVILVAENLGHIKAVSAMTGQNLDRYIGRAFLGDGLATVVSGF 298 Query: 358 VGGTGVTTYAENIGVMAVTKIYSTLVFVVAAVIAILLGFSPKFGAVILTIPGAVLGGVSI 417 GGTGVTTYAENIGVMAVTKIYSTLVFV+AAVIA++LGFSPKFGAVI TIPG VLGGVSI Sbjct: 299 AGGTGVTTYAENIGVMAVTKIYSTLVFVIAAVIALVLGFSPKFGAVIQTIPGPVLGGVSI 358 Query: 418 VVFGLITVSGARIWVENKVDFSNNTNLIVAAVTLVLGAGDFTLKMGGFALGGIGTATFGA 477 VVFGLI V+GARIWV NKVDFS+N NLIVAAVTLVLGAGDF+LK+GGF LGGIGTATFGA Sbjct: 359 VVFGLIAVTGARIWVVNKVDFSDNRNLIVAAVTLVLGAGDFSLKLGGFGLGGIGTATFGA 418 Query: 478 IILHALLKRR 487 IIL+ALL+R+ Sbjct: 419 IILYALLRRK 428 >ref|YP_003905460.1| uracil-xanthine permease [Burkholderia sp. CCGE1003] gb|ADN56169.1| uracil-xanthine permease [Burkholderia sp. CCGE1003] Length = 435 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 345/430 (80%), Positives = 390/430 (90%), Gaps = 2/430 (0%) Query: 58 MSGSYFPQWRLRQSTNDGQGAVIAADERLPAPQTLAMGVQHVVAMFGSTVLAPLLMGFDP 117 M+ SYFP+WR++ +G+ ++ DERL PQ AMG+QHVVAMFGSTVLAPLLMGFDP Sbjct: 1 MADSYFPRWRVQPDAVEGR--IVGTDERLAWPQMFAMGIQHVVAMFGSTVLAPLLMGFDP 58 Query: 118 NLAILMSGVGTLLFFLMVGGRVPSYLGSSFSFIGLVIAVTGYAGSGPNANLGVALGGIIA 177 NL I MSG+GTLLFF++VGGRVPSYLGSSF+FIGLVIAVTGY G GPN N+ VALGGIIA Sbjct: 59 NLCIFMSGIGTLLFFVLVGGRVPSYLGSSFAFIGLVIAVTGYGGHGPNMNIPVALGGIIA 118 Query: 178 CGAVYAVIGLIVSGVGTRWIESLMPPVVTGAVVAVIGLNLAPIAVKGVSGSSFDSWMALA 237 CG VYA+IG+IVS VGTRWIE+LMPPVVTGA+V VIGLNLAPIAV+GVSGS+FDSWMAL Sbjct: 119 CGVVYAIIGVIVSAVGTRWIETLMPPVVTGAIVCVIGLNLAPIAVRGVSGSNFDSWMALV 178 Query: 238 TILCVGFVAVFTRGMLQRLLILIGLLLAYVLYAVLTNGMGLGKPIDFSTVANAAWFGLPH 297 T+LCVG VAVF GMLQRLLIL+GLL+AYV+YA++TNG+G+GKPIDFS VANAAWFG+PH Sbjct: 179 TVLCVGAVAVFAHGMLQRLLILVGLLMAYVIYAIVTNGLGMGKPIDFSIVANAAWFGMPH 238 Query: 298 FAAPVFQGSAMALLAPVAIILVAENLGHIKAVSAMTGQNLDRYIGRAFIGDGLATMLSGS 357 F APVF AM LLAP+A+ILVAENLGHIKAVSAMTGQNLDRYIGRAF+GDGLAT++SG Sbjct: 239 FTAPVFNAQAMTLLAPIAVILVAENLGHIKAVSAMTGQNLDRYIGRAFLGDGLATVVSGF 298 Query: 358 VGGTGVTTYAENIGVMAVTKIYSTLVFVVAAVIAILLGFSPKFGAVILTIPGAVLGGVSI 417 GGTGVTTYAENIGVMAVTKIYSTLVFV+AA+IA++LGFSPKFGAVI TIPG VLGGVSI Sbjct: 299 AGGTGVTTYAENIGVMAVTKIYSTLVFVIAALIALVLGFSPKFGAVIQTIPGPVLGGVSI 358 Query: 418 VVFGLITVSGARIWVENKVDFSNNTNLIVAAVTLVLGAGDFTLKMGGFALGGIGTATFGA 477 VVFGLI V+GARIWV NKVDFS+N NLIVAAVTLVLGAGDF+LK+GGF LGGIGTATFGA Sbjct: 359 VVFGLIAVTGARIWVVNKVDFSDNRNLIVAAVTLVLGAGDFSLKLGGFGLGGIGTATFGA 418 Query: 478 IILHALLKRR 487 IIL+ALL+R+ Sbjct: 419 IILYALLRRK 428