BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4517.p (249 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776999.1| ADP-ribose pyrophosphatase [Herbaspirillum s... 344 6e-93 ref|YP_004751814.1| NUDIX hydrolase [Collimonas fungivorans Ter3... 286 2e-75 ref|YP_003907678.1| NUDIX hydrolase [Burkholderia sp. CCGE1003] ... 229 3e-58 ref|YP_004228941.1| NUDIX hydrolase [Burkholderia sp. CCGE1001] ... 228 6e-58 ref|YP_001896438.1| NUDIX hydrolase [Burkholderia phytofirmans P... 228 6e-58 >ref|YP_003776999.1| ADP-ribose pyrophosphatase [Herbaspirillum seropedicae SmR1] gb|ADJ65091.1| ADP-ribose pyrophosphatase protein [Herbaspirillum seropedicae SmR1] Length = 184 Score = 344 bits (883), Expect = 6e-93, Method: Composition-based stats. Identities = 172/184 (93%), Positives = 180/184 (97%) Query: 66 MSEFKFCPVCAASLVLRADEGEAGKVRLACPEGHWTHWDNPLPVLAALVEIDGKMLTARN 125 MS+FKFCPVCAASL LRADEGEAGKVRLACP+GHWTHWDNPLPVLAALVEIDGKMLTARN Sbjct: 1 MSQFKFCPVCAASLELRADEGEAGKVRLACPDGHWTHWDNPLPVLAALVEIDGKMLTARN 60 Query: 126 AAWAEGRFALITGFMERDETPEQGIARELKEETDLDAQQIELIGVYEFMRKNELIIAYYV 185 AAWAEGRFALITGFMERDETPEQGIARELKEETDLDAQ+IELIGVYEFMRKNELIIAYYV Sbjct: 61 AAWAEGRFALITGFMERDETPEQGIARELKEETDLDAQEIELIGVYEFMRKNELIIAYYV 120 Query: 186 KASGTIKLSPELLEYRLSEPADLRPWPAGTGHAVADWMRQRGLPVQYVEFAGSSTPIETP 245 KASG+I+LSPEL+EYRL+E ADLRPWPAGTGHAVADWMR+RGL VQYVEFAGSSTPI TP Sbjct: 121 KASGSIRLSPELVEYRLTEAADLRPWPAGTGHAVADWMRRRGLDVQYVEFAGSSTPIATP 180 Query: 246 QVLK 249 QVLK Sbjct: 181 QVLK 184 >ref|YP_004751814.1| NUDIX hydrolase [Collimonas fungivorans Ter331] gb|AEK60991.1| NUDIX hydrolase [Collimonas fungivorans Ter331] Length = 184 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 140/169 (82%), Positives = 156/169 (92%) Query: 66 MSEFKFCPVCAASLVLRADEGEAGKVRLACPEGHWTHWDNPLPVLAALVEIDGKMLTARN 125 MS+FKFCPVCA SL+ R+DEGE GK RLACPEGHWTHWDNPLPVLAA+VEIDGK+L ARN Sbjct: 1 MSDFKFCPVCATSLIQRSDEGEGGKSRLACPEGHWTHWDNPLPVLAAIVEIDGKVLLARN 60 Query: 126 AAWAEGRFALITGFMERDETPEQGIARELKEETDLDAQQIELIGVYEFMRKNELIIAYYV 185 AAW EG FALITGFMERDETPEQGIARE+KEET+LDA+Q++L+GVYEFMRKNELIIAY+V Sbjct: 61 AAWEEGMFALITGFMERDETPEQGIAREIKEETNLDAEQVKLVGVYEFMRKNELIIAYHV 120 Query: 186 KASGTIKLSPELLEYRLSEPADLRPWPAGTGHAVADWMRQRGLPVQYVE 234 KASG I+LSPELLEYRL EPA LRPW AGTGHAVADWMR +GL V+YV+ Sbjct: 121 KASGQIRLSPELLEYRLLEPAALRPWRAGTGHAVADWMRAQGLAVEYVD 169 >ref|YP_003907678.1| NUDIX hydrolase [Burkholderia sp. CCGE1003] gb|ADN58387.1| NUDIX hydrolase [Burkholderia sp. CCGE1003] Length = 176 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 115/175 (65%), Positives = 143/175 (81%), Gaps = 3/175 (1%) Query: 66 MSEFKFCPVCAASLVLRAD-EGEAGKVRLACPEGH--WTHWDNPLPVLAALVEIDGKMLT 122 M++++FCP C+ LV RAD E E G++R +CP+ + HW+NPLPV+AA+VE +GK+L Sbjct: 1 MTDYRFCPRCSTPLVERADAEHEGGRIRQSCPDAQCGYVHWNNPLPVVAAIVEYEGKILL 60 Query: 123 ARNAAWAEGRFALITGFMERDETPEQGIARELKEETDLDAQQIELIGVYEFMRKNELIIA 182 ARNAAWAEG FALITGF+E ETPE+GIARE+ EET L A+ +ELIGVYEF+RKNELIIA Sbjct: 61 ARNAAWAEGVFALITGFLENGETPEEGIAREVWEETSLHAESVELIGVYEFIRKNELIIA 120 Query: 183 YYVKASGTIKLSPELLEYRLSEPADLRPWPAGTGHAVADWMRQRGLPVQYVEFAG 237 Y+VKA GTI LSPELLEYRL EPA LRPW AGTG A+ +WMR+RGLP ++V+ G Sbjct: 121 YHVKAHGTISLSPELLEYRLVEPAKLRPWRAGTGQALGEWMRRRGLPFEFVDKPG 175 >ref|YP_004228941.1| NUDIX hydrolase [Burkholderia sp. CCGE1001] gb|ADX55881.1| NUDIX hydrolase [Burkholderia sp. CCGE1001] Length = 176 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 114/175 (65%), Positives = 141/175 (80%), Gaps = 3/175 (1%) Query: 66 MSEFKFCPVCAASLVLRAD-EGEAGKVRLACPEGH--WTHWDNPLPVLAALVEIDGKMLT 122 M++++FCP CA L+ RAD E E G++R CP+ + HW+NPLPV+AA+VE GK+L Sbjct: 1 MTDYRFCPRCATPLIERADAEHEGGRIRQTCPDAQCGYVHWNNPLPVVAAIVEYKGKILL 60 Query: 123 ARNAAWAEGRFALITGFMERDETPEQGIARELKEETDLDAQQIELIGVYEFMRKNELIIA 182 ARNAAWAEG FALITGF+E ETPE+GIARE+ EET L A+ +ELIGVYEF+RKNELIIA Sbjct: 61 ARNAAWAEGVFALITGFLENGETPEEGIAREVWEETSLHAESVELIGVYEFIRKNELIIA 120 Query: 183 YYVKASGTIKLSPELLEYRLSEPADLRPWPAGTGHAVADWMRQRGLPVQYVEFAG 237 Y+VKA GT+ LSPELLEYRL EPA LRPW AGTG A+ +WMR+RGLP ++V+ G Sbjct: 121 YHVKAHGTVSLSPELLEYRLIEPAKLRPWRAGTGQALGEWMRRRGLPFEFVDKPG 175 >ref|YP_001896438.1| NUDIX hydrolase [Burkholderia phytofirmans PsJN] gb|ACD17214.1| NUDIX hydrolase [Burkholderia phytofirmans PsJN] Length = 176 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 117/175 (66%), Positives = 142/175 (81%), Gaps = 3/175 (1%) Query: 66 MSEFKFCPVCAASLVLRAD-EGEAGKVRLACPEGH--WTHWDNPLPVLAALVEIDGKMLT 122 M+E++FCP CA L RAD E E G++R +CP+ + HW+NPLPV+AA+VE +GK+L Sbjct: 1 MTEYRFCPRCATPLTQRADAEHEGGRIRQSCPDPTCGYVHWNNPLPVVAAIVEYEGKILL 60 Query: 123 ARNAAWAEGRFALITGFMERDETPEQGIARELKEETDLDAQQIELIGVYEFMRKNELIIA 182 ARNAAWAEG FALITGF+E ETPE+GIARE+ EET L A+ +ELIGVYEF+RKNELIIA Sbjct: 61 ARNAAWAEGMFALITGFLENGETPEEGIAREVLEETSLRAETVELIGVYEFIRKNELIIA 120 Query: 183 YYVKASGTIKLSPELLEYRLSEPADLRPWPAGTGHAVADWMRQRGLPVQYVEFAG 237 Y+VKA GTI LSPELLEYRL EPA LRPW AGTG A+ +WMR+RGLP ++VE G Sbjct: 121 YHVKAYGTIALSPELLEYRLVEPAKLRPWRAGTGQALGEWMRRRGLPFEFVERPG 175