BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4514.p         (108 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_161101.1| hypothetical protein ebA7187 [Aromatoleum aroma...    54   9e-06

>ref|YP_161101.1| hypothetical protein ebA7187 [Aromatoleum aromaticum EbN1]
 emb|CAI10200.1| hypothetical protein ebA7187 [Aromatoleum aromaticum EbN1]
          Length = 106

 Score = 53.9 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/77 (44%), Positives = 43/77 (55%)

Query: 11 LFALHEEDELVFIILRLLQQIVAGLFGKGLEIAHRTGIGGGHPEHLPAGHVGQGFLGLED 70
          L A  EE E     L LLQQI+AGL  + LEI HR+G+   H  HL  GH  +  L  +D
Sbjct: 15 LLAPQEEFESPIGRLALLQQIIAGLLRERLEILHRSGVRREHAHHLARGHFREHLLRTQD 74

Query: 71 GQRTVQSARIKFPVKLN 87
           QR  Q A I F V+++
Sbjct: 75 WQRAGQPACIDFLVEIH 91