BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4475.p         (123 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EGD00449.1| PHB depolymerase family esterase [Burkholderia sp...    67   8e-10
ref|ZP_02910113.1| esterase, PHB depolymerase family [Burkholder...    66   2e-09
ref|ZP_04942120.1| Esterase, PHB depolymerase [Burkholderia ceno...    65   3e-09
ref|YP_624357.1| esterase, PHB depolymerase [Burkholderia cenoce...    65   3e-09
ref|YP_775120.1| PHB depolymerase family esterase [Burkholderia ...    65   5e-09

>gb|EGD00449.1| PHB depolymerase family esterase [Burkholderia sp. TJI49]
          Length = 369

 Score = 67.4 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 49/135 (36%), Positives = 65/135 (48%), Gaps = 13/135 (9%)

Query: 1   MLKKLKRLWFSEMKKATSVQRKR--------IETILKVFRTNPSTTTKAERRSATTTPSD 52
           M K L ++W   MK+  S   KR           +L+   T P+ +  +  R +   P  
Sbjct: 1   MTKSLTKMWLGGMKRMLSPVGKRAARDAQRITRDVLEAAAT-PAASELSPPRESRVRPRA 59

Query: 53  AAKPIGAWVSGHLRHGSGL---TQRIHYRLFLPC-RPEAAMPLVVMLHGCQQNAAEVAQG 108
           AA   G W  G       L    Q++ Y L++P  R   AMPLVVMLHGCQQ+  E  QG
Sbjct: 60  AAWATGEWTRGEHPMAPALGRLVQQLAYGLYVPTGRRRGAMPLVVMLHGCQQSVDEFVQG 119

Query: 109 TDLNVHAAKRGGAVL 123
           T +N+ A K G AVL
Sbjct: 120 TRMNLLADKHGFAVL 134


>ref|ZP_02910113.1| esterase, PHB depolymerase family [Burkholderia ambifaria MEX-5]
 gb|EDT38759.1| esterase, PHB depolymerase family [Burkholderia ambifaria MEX-5]
          Length = 369

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/134 (36%), Positives = 66/134 (49%), Gaps = 11/134 (8%)

Query: 1   MLKKLKRLWFSEMKKATSVQRKRI-ETILKVFR------TNPSTTTKAERRSATTTPSDA 53
           M K L ++W   +K+  S   KR      ++ R       + + T  +  R +   P  A
Sbjct: 1   MTKSLTKVWLGGVKRMLSPAAKRAARDAQRIARDTLEAAASSAATDLSPPRESRVRPRAA 60

Query: 54  AKPIGAWVSGHLRHGSGL---TQRIHYRLFLP-CRPEAAMPLVVMLHGCQQNAAEVAQGT 109
           A   G W  G       L    Q++ Y L++P  R   AMPLVVMLHGCQQ+A E AQGT
Sbjct: 61  AWAAGEWTRGEHPMAPALGRLVQQLAYGLYVPPGRRRGAMPLVVMLHGCQQSADEFAQGT 120

Query: 110 DLNVHAAKRGGAVL 123
            +N+ A K G AVL
Sbjct: 121 RMNLLADKHGFAVL 134


>ref|ZP_04942120.1| Esterase, PHB depolymerase [Burkholderia cenocepacia PC184]
 gb|EAY65291.1| Esterase, PHB depolymerase [Burkholderia cenocepacia PC184]
          Length = 255

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/130 (36%), Positives = 62/130 (47%), Gaps = 7/130 (5%)

Query: 1   MLKKLKRLWFSEMKKATSVQRKRIETILKVFRTNP---STTTKAERRSATTTPSDAAKPI 57
           M K L ++W   MK+  S   KR     +    +    + +  +  R +   P  AA   
Sbjct: 1   MTKSLTKVWLGGMKRMLSPTAKRAARDAQRITRDALEAAASDLSPPRESRVRPRAAAWAA 60

Query: 58  GAWVSGHLRHGSGL---TQRIHYRLFLPC-RPEAAMPLVVMLHGCQQNAAEVAQGTDLNV 113
           G W  G       L    Q + Y L++P  R   AMPLVVMLHGCQQ+  E AQGT +N+
Sbjct: 61  GEWTRGEYPMTPALGRLVQNLAYGLYIPPDRRRGAMPLVVMLHGCQQSVDEFAQGTRMNL 120

Query: 114 HAAKRGGAVL 123
            A K G AVL
Sbjct: 121 LADKHGFAVL 130


>ref|YP_624357.1| esterase, PHB depolymerase [Burkholderia cenocepacia AU 1054]
 ref|YP_837492.1| PHB depolymerase family esterase [Burkholderia cenocepacia HI2424]
 ref|YP_001777307.1| PHB depolymerase family esterase [Burkholderia cenocepacia MC0-3]
 gb|ABF79384.1| Esterase, PHB depolymerase [Burkholderia cenocepacia AU 1054]
 gb|ABK10599.1| esterase, PHB depolymerase family [Burkholderia cenocepacia HI2424]
 gb|ACA92817.1| esterase, PHB depolymerase family [Burkholderia cenocepacia MC0-3]
          Length = 365

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/130 (36%), Positives = 62/130 (47%), Gaps = 7/130 (5%)

Query: 1   MLKKLKRLWFSEMKKATSVQRKRIETILKVFRTNP---STTTKAERRSATTTPSDAAKPI 57
           M K L ++W   MK+  S   KR     +    +    + +  +  R +   P  AA   
Sbjct: 1   MTKSLTKVWLGGMKRMLSPTAKRAARDAQRITRDALEAAASDLSPPRESRVRPRAAAWAA 60

Query: 58  GAWVSGHLRHGSGL---TQRIHYRLFLP-CRPEAAMPLVVMLHGCQQNAAEVAQGTDLNV 113
           G W  G       L    Q + Y L++P  R   AMPLVVMLHGCQQ+  E AQGT +N+
Sbjct: 61  GEWTRGEHPMTPALGRLVQNLAYGLYIPPGRRRGAMPLVVMLHGCQQSVDEFAQGTRMNL 120

Query: 114 HAAKRGGAVL 123
            A K G AVL
Sbjct: 121 LADKHGFAVL 130


>ref|YP_775120.1| PHB depolymerase family esterase [Burkholderia ambifaria AMMD]
 gb|ABI88786.1| esterase, PHB depolymerase family [Burkholderia ambifaria AMMD]
          Length = 369

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 48/134 (35%), Positives = 65/134 (48%), Gaps = 11/134 (8%)

Query: 1   MLKKLKRLWFSEMKKATSVQRKR-IETILKVFR------TNPSTTTKAERRSATTTPSDA 53
           M K L ++W   +K+  S   KR      ++ R       + + T  +  R +   P  A
Sbjct: 1   MTKSLTKVWLGGVKRMLSPAAKRGARDAQRIARDTLEAAASSAATDLSPPRESRVRPRAA 60

Query: 54  AKPIGAWVSGHLRHGSGL---TQRIHYRLFLP-CRPEAAMPLVVMLHGCQQNAAEVAQGT 109
           A   G W  G       L    Q++ Y L++P  R   AMPLVVMLHGCQQ+  E AQGT
Sbjct: 61  AWAAGEWTRGEHPMAPALGRLVQQLAYGLYVPPGRRRGAMPLVVMLHGCQQSVDEFAQGT 120

Query: 110 DLNVHAAKRGGAVL 123
            +N+ A K G AVL
Sbjct: 121 RMNLLADKHGFAVL 134