BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4474.p         (126 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08275620.1| Poly(3-hydroxybutyrate) depolymerase [Oxaloba...    91   4e-17
ref|ZP_06688740.1| PHB depolymerase family esterase [Achromobact...    74   5e-12
ref|YP_004233600.1| esterase, PHB depolymerase family [Acidovora...    70   8e-11
gb|EGP42491.1| esterase, PHB depolymerase family protein [Achrom...    70   1e-10
ref|YP_982171.1| PHB depolymerase family esterase [Polaromonas n...    66   1e-09

>ref|ZP_08275620.1| Poly(3-hydroxybutyrate) depolymerase [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF30913.1| Poly(3-hydroxybutyrate) depolymerase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 268

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 45/73 (61%), Positives = 57/73 (78%)

Query: 36  DVATLAALIEDVVSSHAIDRQRIYVCGISAGAAMAHILALTHPSLVAAVGLHSSPVFGAC 95
           ++  +AA+I  VV+    D +R+YV G+SAGAAMAHILAL HP L+AAVGLHS+PVFGA 
Sbjct: 59  EILLIAAIIRRVVARQGFDPERVYVAGLSAGAAMAHILALRHPQLIAAVGLHSAPVFGAA 118

Query: 96  NSAAGAYRVMQHG 108
           ++A GAY VMQ G
Sbjct: 119 STALGAYGVMQRG 131


>ref|ZP_06688740.1| PHB depolymerase family esterase [Achromobacter piechaudii ATCC
           43553]
 gb|EFF74361.1| PHB depolymerase family esterase [Achromobacter piechaudii ATCC
           43553]
          Length = 361

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/79 (49%), Positives = 52/79 (65%)

Query: 34  GWDVATLAALIEDVVSSHAIDRQRIYVCGISAGAAMAHILALTHPSLVAAVGLHSSPVFG 93
           G +   +AALI   V+ H +D +R+YV G+SAGA MA ++AL HPSL+AAV +HS PV G
Sbjct: 154 GAEADLIAALIRSEVARHGLDPERVYVAGLSAGAGMAALVALRHPSLIAAVAMHSGPVVG 213

Query: 94  ACNSAAGAYRVMQHGSGHP 112
             +SAA     M+ GS  P
Sbjct: 214 DAHSAAAGIGTMRRGSLKP 232


>ref|YP_004233600.1| esterase, PHB depolymerase family [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gb|ADX45033.1| esterase, PHB depolymerase family [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 318

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/83 (48%), Positives = 52/83 (62%)

Query: 32  KKGWDVATLAALIEDVVSSHAIDRQRIYVCGISAGAAMAHILALTHPSLVAAVGLHSSPV 91
           + G + A LAAL   +   H +DR R++V G+SAG AMA ILA ++P + AAVG+HS   
Sbjct: 116 RDGGEPAVLAALALSIAHEHRMDRSRVFVAGLSAGGAMADILACSYPDIFAAVGVHSGLR 175

Query: 92  FGACNSAAGAYRVMQHGSGHPGG 114
            GA N A  A  VM+ GS  PGG
Sbjct: 176 AGAANDAMSALSVMRSGSPAPGG 198


>gb|EGP42491.1| esterase, PHB depolymerase family protein [Achromobacter
           xylosoxidans AXX-A]
          Length = 314

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/79 (44%), Positives = 54/79 (68%)

Query: 34  GWDVATLAALIEDVVSSHAIDRQRIYVCGISAGAAMAHILALTHPSLVAAVGLHSSPVFG 93
           G +   +AALI+  V+ H +D +R+Y+ G+SAGA+MA ++AL HP+L+AA+ +HS PV G
Sbjct: 110 GAEADLIAALIQAEVARHGLDPERVYIAGLSAGASMAALVALRHPALIAALAMHSGPVLG 169

Query: 94  ACNSAAGAYRVMQHGSGHP 112
             ++AA     M+ GS  P
Sbjct: 170 DAHNAAAGLNTMRRGSVKP 188


>ref|YP_982171.1| PHB depolymerase family esterase [Polaromonas naphthalenivorans
           CJ2]
 gb|ABM37250.1| esterase, PHB depolymerase family [Polaromonas naphthalenivorans
           CJ2]
          Length = 433

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/79 (50%), Positives = 55/79 (69%), Gaps = 2/79 (2%)

Query: 36  DVATLAALIEDVVSSHAIDRQRIYVCGISAGAAMAHILALTHPSLVAAVGLHSSPVFGAC 95
           DV  +A +++ V + H +D  R YV G+SAGA +A ILAL HP L+AA GLHS+PV+G  
Sbjct: 220 DVELIAEMVKQVQAKHRLDTSRTYVAGLSAGAGLAAILALRHPRLIAAAGLHSAPVYGTS 279

Query: 96  NSAAGAYRVMQHGSG--HP 112
           +SA G ++ MQ G+G  HP
Sbjct: 280 DSALGGFQAMQQGAGIKHP 298