BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4461.p (373 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776973.1| bifunctional GTP cyclohydrolase II/3,4-dihyd... 709 0.0 ref|YP_001354030.1| bifunctional 3,4-dihydroxy-2-butanone 4-phos... 557 e-156 ref|YP_001099343.1| bifunctional 3,4-dihydroxy-2-butanone 4-phos... 553 e-155 ref|YP_004754082.1| 3,4-dihydroxy-2-butanone 4-phosphate synthas... 538 e-151 ref|YP_002980679.1| bifunctional 3,4-dihydroxy-2-butanone 4-phos... 535 e-150 >ref|YP_003776973.1| bifunctional GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase [Herbaspirillum seropedicae SmR1] gb|ADJ65065.1| bifunctional enzyme: GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase) protein [Herbaspirillum seropedicae SmR1] Length = 373 Score = 709 bits (1830), Expect = 0.0, Method: Composition-based stats. Identities = 368/373 (98%), Positives = 372/373 (99%) Query: 1 MPLATTEEIVAELRAGRMVILVDEEDRENEGDLVLATDFVTPEAINFMVTHARGLVCLTL 60 MPLATTEEIVAELRAGRMVILVDEEDRENEGDLVLATDFVTPEAINFMVTHARGLVCLTL Sbjct: 1 MPLATTEEIVAELRAGRMVILVDEEDRENEGDLVLATDFVTPEAINFMVTHARGLVCLTL 60 Query: 61 TEEHVDQLDLPLMATRNGTPYGTNFTVSIEAAEGVTTGISAADRARTIQVAASKGAKPSD 120 TEEHVDQLDLPLMATRNGTPYGTNFTVSIEAAEGVTTGISAADRARTIQVAASKGAKPSD Sbjct: 61 TEEHVDQLDLPLMATRNGTPYGTNFTVSIEAAEGVTTGISAADRARTIQVAASKGAKPSD 120 Query: 121 LVQPGHIFPLRAQKGGVLMRAGHTEAGCDLTAMAGLTPASVICEILKDDGTMARLPDLLE 180 LVQPGHIFPLRAQKGGVLMRAGHTEAGCDLTAMAGLTPASVICEILK+DGTMARLPDLLE Sbjct: 121 LVQPGHIFPLRAQKGGVLMRAGHTEAGCDLTAMAGLTPASVICEILKEDGTMARLPDLLE 180 Query: 181 FAEKHHLKIGTIADLIHYRSRNESIIERVAEREMQTAHGSFKAIAYRDTPSGGAHLALVR 240 FAEKH LKIGTIADLIHYRSRNESIIERVAEREMQTAHG+FKAIAYRDTPSGGAHLALVR Sbjct: 181 FAEKHKLKIGTIADLIHYRSRNESIIERVAEREMQTAHGAFKAIAYRDTPSGGAHLALVR 240 Query: 241 GDIQPGRETLVRVHQPVSILDLLEAGVTTHSWNLAAAMKAVQEAESGVIVLLNCEESAQQ 300 GDIQPGRETLVRVHQPVSILDLL+AGVTTHSWNLAAAMKAVQEAESGVIVLLNCEESAQQ Sbjct: 241 GDIQPGRETLVRVHQPVSILDLLDAGVTTHSWNLAAAMKAVQEAESGVIVLLNCEESAQQ 300 Query: 301 MFDQFGALNKVGTPEAAKPSRADRMDLRTYGIGAQILRDLGVCKMKLLASPRKMPSMTGF 360 MFDQFGALNKVGTPEAAKPSRADRMDLRTYGIGAQIL+DLGVCKMKLLASPRKMPSMTGF Sbjct: 301 MFDQFGALNKVGTPEAAKPSRADRMDLRTYGIGAQILKDLGVCKMKLLASPRKMPSMTGF 360 Query: 361 QLEVTGYQAREGA 373 QLEVTGYQAREGA Sbjct: 361 QLEVTGYQAREGA 373 >ref|YP_001354030.1| bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein [Janthinobacterium sp. Marseille] gb|ABR88970.1| bifunctional riboflavin biosynthesis protein [Janthinobacterium sp. Marseille] Length = 370 Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats. Identities = 283/370 (76%), Positives = 317/370 (85%), Gaps = 3/370 (0%) Query: 1 MPLATTEEIVAELRAGRMVILVDEEDRENEGDLVLATDFVTPEAINFMVTHARGLVCLTL 60 M ++TT+EIVAELRAGRMVILVDEEDRENEGDLVLA +FVTPEAINFM RGLVCLTL Sbjct: 1 MSISTTQEIVAELRAGRMVILVDEEDRENEGDLVLAAEFVTPEAINFMAKFGRGLVCLTL 60 Query: 61 TEEHVDQLDLPLMATRNGTPYGTNFTVSIEAAEGVTTGISAADRARTIQVAASKGAKPSD 120 TEE DQL L +M TRNGT YGTNFTVSIEAAEGVTTGISAADRA+TIQVA +K AKPSD Sbjct: 61 TEERCDQLALTMMTTRNGTSYGTNFTVSIEAAEGVTTGISAADRAKTIQVAVAKNAKPSD 120 Query: 121 LVQPGHIFPLRAQKGGVLMRAGHTEAGCDLTAMAGLTPASVICEILKDDGTMARLPDLLE 180 +VQPGHIFPL+AQKGGVLMRAGHTEAGCD +AGLTPA+VICEI+KDDGTMARLPDL+E Sbjct: 121 IVQPGHIFPLKAQKGGVLMRAGHTEAGCDFAELAGLTPAAVICEIMKDDGTMARLPDLIE 180 Query: 181 FAEKHHLKIGTIADLIHYRSRNESIIERVAEREMQTAHGSFKAIAYRDTPSGGAHLALVR 240 FA++H LKIGTIADLIHYRS++E+I++RV ER M+T +GSFK I YRD PSGGAHLALV Sbjct: 181 FAKEHGLKIGTIADLIHYRSQHETIVDRVGERVMETVYGSFKTIVYRDKPSGGAHLALVH 240 Query: 241 GDIQPGRETLVRVHQPVSILDLLEAGVTTHSWNLAAAMKAVQEAESGVIVLLNCEESAQQ 300 GDI +ETLVRVHQPVS+LD LE TTHSWNLA+AM A++++E GV+VLLNCEESA + Sbjct: 241 GDISADQETLVRVHQPVSVLDWLETKATTHSWNLASAMAAIKQSERGVMVLLNCEESADE 300 Query: 301 MFDQFGALNKVGTPEAAKPSRADRMDLRTYGIGAQILRDLGVCKMKLLASPRKMPSMTGF 360 F QF ALN PE+ RA MDLRTYGIGAQIL+DL V KMKLLA+ RKMPSM GF Sbjct: 301 FFSQFEALN---NPESRPQQRAAHMDLRTYGIGAQILKDLSVGKMKLLANQRKMPSMAGF 357 Query: 361 QLEVTGYQAR 370 LEVTGYQAR Sbjct: 358 DLEVTGYQAR 367 >ref|YP_001099343.1| bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein [Herminiimonas arsenicoxydans] emb|CAL61216.1| Riboflavin biosynthesis protein ribAB [Includes: GTP cyclohydrolase-2 (GTP cyclohydrolase II); 3, 4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase)] [Herminiimonas arsenicoxydans] Length = 370 Score = 553 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 278/369 (75%), Positives = 319/369 (86%), Gaps = 3/369 (0%) Query: 1 MPLATTEEIVAELRAGRMVILVDEEDRENEGDLVLATDFVTPEAINFMVTHARGLVCLTL 60 M ++TT+EIVAELRAGRMVILVDEEDRENEGDLVLA +FVTPEAINFM RGLVCLTL Sbjct: 1 MSISTTQEIVAELRAGRMVILVDEEDRENEGDLVLAAEFVTPEAINFMAKFGRGLVCLTL 60 Query: 61 TEEHVDQLDLPLMATRNGTPYGTNFTVSIEAAEGVTTGISAADRARTIQVAASKGAKPSD 120 TEEH DQL L +M +RNGT YGTNFTVSIEAAEGVTTGISAADRA+TIQVA ++ AKPSD Sbjct: 61 TEEHCDQLALSMMTSRNGTSYGTNFTVSIEAAEGVTTGISAADRAKTIQVAVARNAKPSD 120 Query: 121 LVQPGHIFPLRAQKGGVLMRAGHTEAGCDLTAMAGLTPASVICEILKDDGTMARLPDLLE 180 +VQPGHIFPL+AQKGGVLMRAGHTEAGCD +AGL PA+VICEI+KDDGTMARLPDL+E Sbjct: 121 IVQPGHIFPLKAQKGGVLMRAGHTEAGCDFAELAGLVPAAVICEIMKDDGTMARLPDLIE 180 Query: 181 FAEKHHLKIGTIADLIHYRSRNESIIERVAEREMQTAHGSFKAIAYRDTPSGGAHLALVR 240 FA++H LKIGTIADLIHYRS++ESI++RV ER M+T +G+F A+ YRD PSGGAHLALV Sbjct: 181 FAKEHDLKIGTIADLIHYRSQHESIVDRVDERTMETVYGTFHAVLYRDKPSGGAHLALVH 240 Query: 241 GDIQPGRETLVRVHQPVSILDLLEAGVTTHSWNLAAAMKAVQEAESGVIVLLNCEESAQQ 300 GDI P +ETLVRVHQPVSILDLL+ TTHSWN+A+A+ A+++ E GV+VLLNCEESA++ Sbjct: 241 GDIAPDQETLVRVHQPVSILDLLDTRATTHSWNMASAIAAIRQVERGVMVLLNCEESAEE 300 Query: 301 MFDQFGALNKVGTPEAAKPSRADRMDLRTYGIGAQILRDLGVCKMKLLASPRKMPSMTGF 360 +F QF AL P+ RA RMDLR YGIGAQIL+DL V KMKLLA+PRKMPSMTGF Sbjct: 301 LFSQFAALTH---PDTRPQQRAARMDLRNYGIGAQILKDLSVGKMKLLANPRKMPSMTGF 357 Query: 361 QLEVTGYQA 369 LEVTGY+A Sbjct: 358 NLEVTGYRA 366 >ref|YP_004754082.1| 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II [Collimonas fungivorans Ter331] gb|AEK63259.1| 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II [Collimonas fungivorans Ter331] Length = 370 Score = 538 bits (1385), Expect = e-151, Method: Composition-based stats. Identities = 281/373 (75%), Positives = 317/373 (84%), Gaps = 3/373 (0%) Query: 1 MPLATTEEIVAELRAGRMVILVDEEDRENEGDLVLATDFVTPEAINFMVTHARGLVCLTL 60 M +ATTEEI+AELRAGRMVILVDEEDRENEGDLVLA DFVTPEAINFMV +ARGLVCLTL Sbjct: 1 MSIATTEEIIAELRAGRMVILVDEEDRENEGDLVLAADFVTPEAINFMVKYARGLVCLTL 60 Query: 61 TEEHVDQLDLPLMATRNGTPYGTNFTVSIEAAEGVTTGISAADRARTIQVAASKGAKPSD 120 TEE DQL+L +M +RNGT YGTNFTVSIEAAEGVTTGISAADRARTIQVA + GAK D Sbjct: 61 TEERCDQLNLGMMTSRNGTAYGTNFTVSIEAAEGVTTGISAADRARTIQVAVAPGAKAGD 120 Query: 121 LVQPGHIFPLRAQKGGVLMRAGHTEAGCDLTAMAGLTPASVICEILKDDGTMARLPDLLE 180 +VQPGHIFP++A+KGGVLMRAGHTEAGCDLT MAGLTPA+VICEILK+DGTMARLPDLLE Sbjct: 121 IVQPGHIFPIKARKGGVLMRAGHTEAGCDLTEMAGLTPAAVICEILKEDGTMARLPDLLE 180 Query: 181 FAEKHHLKIGTIADLIHYRSRNESIIERVAEREMQTAHGSFKAIAYRDTPSGGAHLALVR 240 F+++H LK+GTIADLIHYR ++ESI+ER+AER TA G+FK IAYRDTPSGGAHLAL+ Sbjct: 181 FSKEHGLKVGTIADLIHYRGQHESIVERLAERTTHTAQGTFKTIAYRDTPSGGAHLALLH 240 Query: 241 GDIQPGRETLVRVHQPVSILDLLEAGVTTHSWNLAAAMKAVQEAESGVIVLLNCEESAQQ 300 G P ETLVRVHQPVSILDLLE T HSWN+A+A+ A+ + GV+VLLNCEESA Q Sbjct: 241 GTPAPDVETLVRVHQPVSILDLLETEATNHSWNMASALAAISASPCGVVVLLNCEESADQ 300 Query: 301 MFDQFGALNKVGTPEAAKPSRADRMDLRTYGIGAQILRDLGVCKMKLLASPRKMPSMTGF 360 +F +F AL + P R+DLRTYGIGAQIL+DLGV KMKLLASPRKMPSMTG+ Sbjct: 301 IFAKFAALEAACSGVKPPPP---RVDLRTYGIGAQILKDLGVGKMKLLASPRKMPSMTGY 357 Query: 361 QLEVTGYQAREGA 373 LEVTGYQ + A Sbjct: 358 DLEVTGYQNKPNA 370 >ref|YP_002980679.1| bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein [Ralstonia pickettii 12D] gb|ACS62007.1| 3,4-dihydroxy-2-butanone 4-phosphate synthase [Ralstonia pickettii 12D] Length = 379 Score = 535 bits (1377), Expect = e-150, Method: Composition-based stats. Identities = 277/373 (74%), Positives = 317/373 (84%), Gaps = 6/373 (1%) Query: 1 MPLATTEEIVAELRAGRMVILVDEEDRENEGDLVLATDFVTPEAINFMVTHARGLVCLTL 60 M +AT EEI+AE+RAGRMVILVDEEDRENEGDL+LA+DFVTPEAINFMVTHARGLVCLTL Sbjct: 1 MSIATVEEIIAEIRAGRMVILVDEEDRENEGDLILASDFVTPEAINFMVTHARGLVCLTL 60 Query: 61 TEEHVDQLDLPLMATRNGTPYGTNFTVSIEAAEGVTTGISAADRARTIQVAASKGAKPSD 120 TEEH DQLDLP+MA+RNGT +GTNFTVSIEAAEGVTTGISAADRARTIQVAA+K AKPSD Sbjct: 61 TEEHCDQLDLPMMASRNGTQFGTNFTVSIEAAEGVTTGISAADRARTIQVAAAKNAKPSD 120 Query: 121 LVQPGHIFPLRAQKGGVLMRAGHTEAGCDLTAMAGLTPASVICEILKDDGTMARLPDLLE 180 LV PGHIFPLRAQKGGVLMRAGHTEAGCDLTAMAGLTPA+VICEILKDDGTMARLPDL+E Sbjct: 121 LVNPGHIFPLRAQKGGVLMRAGHTEAGCDLTAMAGLTPAAVICEILKDDGTMARLPDLVE 180 Query: 181 FAEKHHLKIGTIADLIHYRSRNESIIERVAEREMQTAHGSFKAIAYRDTPSGGAHLALVR 240 FAEKH LKIGTIAD+I YRSR ESI+ERV ER M+T G+F A+A+RD +G AHLALV+ Sbjct: 181 FAEKHGLKIGTIADMIQYRSRTESIVERVGERTMETQFGTFHAVAFRDRAAGRAHLALVK 240 Query: 241 GDIQPGRETLVRVHQPVSILDLLEAGVTTHSWNLAAAMKAVQEAESGVIVLLNCEESAQQ 300 G P ETLVRVH+P+S+LDLLE TTHSW++ AA++A+Q A +GV+VLLNC +SA + Sbjct: 241 GTPTPDTETLVRVHEPLSVLDLLECQRTTHSWSVPAALRAIQAAPTGVVVLLNCGDSADR 300 Query: 301 MFDQFGALNKVGTPEAAKPSRADRMDLRTYGIGAQILRDLGVCKMKLLASPRKMPSMTGF 360 +F QF AL+ KP D R YGIGAQIL+D+GV KM++LASP K+PSM G+ Sbjct: 301 LFTQFSALDAPHERPRTKP------DPRIYGIGAQILKDVGVGKMRVLASPLKLPSMVGY 354 Query: 361 QLEVTGYQAREGA 373 LEVT YQ+ A Sbjct: 355 DLEVTAYQSMADA 367