BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4454.p (334 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776967.1| glucokinase [Herbaspirillum seropedicae SmR1... 504 e-141 ref|YP_004752101.1| glucokinase [Collimonas fungivorans Ter331] ... 366 3e-99 gb|EGD01119.1| bifunctional glucokinase/RpiR family transcriptio... 347 2e-93 ref|ZP_03574208.1| glucokinase [Burkholderia multivorans CGD2M] ... 346 3e-93 ref|YP_109210.1| bifunctional glucokinase/RpiR family transcript... 345 5e-93 >ref|YP_003776967.1| glucokinase [Herbaspirillum seropedicae SmR1] gb|ADJ65059.1| glucokinase protein [Herbaspirillum seropedicae SmR1] Length = 333 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 284/325 (87%), Positives = 300/325 (92%) Query: 6 PSSSKPPHAGGPRLLADIGGTNARFALETSPGHIEQVQVLRGADYPQFTDAVQAYLKLAG 65 P+S HA GPRLLADIGGTNARFALET PG IEQVQ+LRGADY +FTDAVQAYLKLAG Sbjct: 5 PTSPAGLHADGPRLLADIGGTNARFALETGPGRIEQVQILRGADYGEFTDAVQAYLKLAG 64 Query: 66 QPAVKHAVVAIANPVQGDQIKMTNHDWAFSIEAARQLLGFDLLLVVNDFTALSMAVPQLR 125 P V+HAVVAIANPVQGDQIKMTNHDWAFSIEAARQLLGF+LLLVVNDFTALSMAVPQLR Sbjct: 65 HPPVRHAVVAIANPVQGDQIKMTNHDWAFSIEAARQLLGFELLLVVNDFTALSMAVPQLR 124 Query: 126 TDELQQIGGGAPKAQHPVGLVGAGTGLGVGGLVRGDGHWLPLASEGGHVAFAPANAREAA 185 DELQQ+GGGAPK P+GLVGAGTGLGVGGL+ DGHWLPLASEGGH AFAPA+ REAA Sbjct: 125 ADELQQVGGGAPKPGAPIGLVGAGTGLGVGGLLHADGHWLPLASEGGHAAFAPADPREAA 184 Query: 186 VLAYAWQFHEHVSAERMVSGPGLEFIHRALLAIEGHPAAELKAAEIVDGALKQGDAVCLE 245 VLAYAWQFHEHVSAER+VSGPGLE IHRALLAI+GHPAAEL AA+IV+GA + GDA+C E Sbjct: 185 VLAYAWQFHEHVSAERLVSGPGLELIHRALLAIDGHPAAELSAAQIVEGARQHGDALCQE 244 Query: 246 TLDLFCSMLGTVAADLALTLGALGGIYIGGGVVPHLGEYFARSPFRARFENKGRMSVLTK 305 TL LFCSMLGTVAADLALTLGALGGIYIG GVVPHLG+YFARSPFRARFENKGRMSVLTK Sbjct: 245 TLALFCSMLGTVAADLALTLGALGGIYIGVGVVPHLGDYFARSPFRARFENKGRMSVLTK 304 Query: 306 AIPTYVITAEYPAFTGVSAILADRL 330 AIPTYVITAEYPAFTGVSAILADRL Sbjct: 305 AIPTYVITAEYPAFTGVSAILADRL 329 >ref|YP_004752101.1| glucokinase [Collimonas fungivorans Ter331] gb|AEK61278.1| Glucokinase [Collimonas fungivorans Ter331] Length = 657 Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats. Identities = 203/328 (61%), Positives = 251/328 (76%), Gaps = 4/328 (1%) Query: 7 SSSKPP---HAGGPRLLADIGGTNARFALETSPGHIEQVQVLRGADYPQFTDAVQAYLKL 63 S+S+ P + GPRLLAD+GGTNARF LE +PG I+ +Q LR ADY +F AV+AYL Sbjct: 8 SASENPATSYLDGPRLLADVGGTNARFGLERAPGQIDSIQTLRCADYAEFALAVEAYLSG 67 Query: 64 AGQPAVKHAVVAIANPVQGDQIKMTNHDWAFSIEAARQLLGFDLLLVVNDFTALSMAVPQ 123 + P V+HA +AIANPVQGD IKMTNHDW FSIE R+ L D LLVVNDFTALSM++P Sbjct: 68 SEHPQVRHAAIAIANPVQGDDIKMTNHDWEFSIETTRRRLNLDTLLVVNDFTALSMSLPH 127 Query: 124 LRTDELQQIGGGAPKAQHPVGLVGAGTGLGVGGLVRGDGHWLPLASEGGHVAFAPANARE 183 L Q+GGG + VGLVGAGTGLGVGGL+ +G W+ L SEGGHV FAP++ARE Sbjct: 128 LEQSHCIQVGGGRALSGGVVGLVGAGTGLGVGGLIPTEGRWIALGSEGGHVTFAPSDARE 187 Query: 184 AAVLAYAWQFHEHVSAERMVSGPGLEFIHRALLAIEGHPAAE-LKAAEIVDGALKQGDAV 242 AAVLAY W+ + HVSAER+VSGPG+E I++AL ++G E L+ A+IV+ AL+ D + Sbjct: 188 AAVLAYCWRTYSHVSAERLVSGPGIEMIYQALSDMQGVAKPEPLQTAQIVERALQGQDGL 247 Query: 243 CLETLDLFCSMLGTVAADLALTLGALGGIYIGGGVVPHLGEYFARSPFRARFENKGRMSV 302 C+E +++FC MLGTVA+D+A+TLG LGG+YIGGGVVP LGEYFARSPFRARFE+KGR S Sbjct: 248 CMEVVEVFCGMLGTVASDVAVTLGTLGGLYIGGGVVPRLGEYFARSPFRARFESKGRFSN 307 Query: 303 LTKAIPTYVITAEYPAFTGVSAILADRL 330 IPT+VITA YPAF GV+AIL++ L Sbjct: 308 YLARIPTFVITAPYPAFVGVAAILSEHL 335 >gb|EGD01119.1| bifunctional glucokinase/RpiR family transcriptional regulator [Burkholderia sp. TJI49] Length = 642 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 193/319 (60%), Positives = 232/319 (72%), Gaps = 2/319 (0%) Query: 13 HAGGPRLLADIGGTNARFALETSPGHIEQVQVLRGADYPQFTDAVQAYLKLAGQPAVKHA 72 HA GPRLLAD+GGTNARFALET PG I Q++V GADYP TDA++ YLK V HA Sbjct: 15 HADGPRLLADVGGTNARFALETGPGEITQIRVYPGADYPTITDAIRKYLKDVKISRVNHA 74 Query: 73 VVAIANPVQGDQIKMTNHDWAFSIEAARQLLGFDLLLVVNDFTALSMAVPQLRTDELQQI 132 +AIANPV GDQ+ MTNHDW+FSIEA R+ LGFD LLVVNDFTAL+MA+P L + QI Sbjct: 75 AIAIANPVDGDQVTMTNHDWSFSIEATRRALGFDTLLVVNDFTALAMALPGLTDAQRVQI 134 Query: 133 GGGAPKAQHPVGLVGAGTGLGVGGLVRGDGHWLPLASEGGHVAFAPANAREAAVLAYAWQ 192 GGG + +GL+G GTGLGV GL+ D W+ L SEGGH +FAP + RE VL YA + Sbjct: 135 GGGPRRQNSVIGLLGPGTGLGVSGLIPADDRWIALGSEGGHASFAPQDEREDLVLQYARK 194 Query: 193 FHEHVSAERMVSGPGLEFIHRALLAIE-GHPAAELKAAEIVDGALKQGDAVCLETLDLFC 251 HVS ER+ +GPG+E ++RAL A + AA + AEIV+ A GDA+ LE +D FC Sbjct: 195 KFPHVSFERVCAGPGMEIVYRALAARDKKRVAATVDTAEIVERA-HAGDALALEAVDCFC 253 Query: 252 SMLGTVAADLALTLGALGGIYIGGGVVPHLGEYFARSPFRARFENKGRMSVLTKAIPTYV 311 ++LGT A ++A+TLGALGG+YIGGGV LGE F RSPFRARFE KGR IPTY+ Sbjct: 254 AILGTFAGNIAVTLGALGGVYIGGGVALKLGELFTRSPFRARFEAKGRFEAYLANIPTYL 313 Query: 312 ITAEYPAFTGVSAILADRL 330 ITAEYPAF GVSAILA++L Sbjct: 314 ITAEYPAFLGVSAILAEQL 332 >ref|ZP_03574208.1| glucokinase [Burkholderia multivorans CGD2M] ref|ZP_03579392.1| glucokinase [Burkholderia multivorans CGD2] gb|EEE06122.1| glucokinase [Burkholderia multivorans CGD2] gb|EEE11425.1| glucokinase [Burkholderia multivorans CGD2M] Length = 642 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 193/319 (60%), Positives = 233/319 (73%), Gaps = 2/319 (0%) Query: 13 HAGGPRLLADIGGTNARFALETSPGHIEQVQVLRGADYPQFTDAVQAYLKLAGQPAVKHA 72 HA GPRLLAD+GGTNARFALET PG I Q++V GADYP TDA++ YLK V HA Sbjct: 15 HADGPRLLADVGGTNARFALETGPGEITQIRVYPGADYPTLTDAIRKYLKDVKISRVNHA 74 Query: 73 VVAIANPVQGDQIKMTNHDWAFSIEAARQLLGFDLLLVVNDFTALSMAVPQLRTDELQQI 132 +AIANPV GDQ+ MTNHDW+FSIEA R+ LGFD LLVVNDFTAL+MA+P L + QI Sbjct: 75 AIAIANPVDGDQVTMTNHDWSFSIEATRRALGFDTLLVVNDFTALAMALPGLTDAQRVQI 134 Query: 133 GGGAPKAQHPVGLVGAGTGLGVGGLVRGDGHWLPLASEGGHVAFAPANAREAAVLAYAWQ 192 GGG + +GL+G GTGLGV GL+ D W+ L SEGGH +FAP + RE VL YA + Sbjct: 135 GGGTRRQNSVIGLLGPGTGLGVSGLIPADDRWIALGSEGGHASFAPQDEREDLVLQYARK 194 Query: 193 FHEHVSAERMVSGPGLEFIHRALLAIE-GHPAAELKAAEIVDGALKQGDAVCLETLDLFC 251 HVS ER+ +GPG+E I+RAL A + AA + AE+V+ A GDA+ LET++ FC Sbjct: 195 KFPHVSFERVCAGPGIEIIYRALAARDKKRVAASVDTAEVVERA-HAGDALALETVECFC 253 Query: 252 SMLGTVAADLALTLGALGGIYIGGGVVPHLGEYFARSPFRARFENKGRMSVLTKAIPTYV 311 +LG+ A +ALTLGALGG+YIGGGV LGE F RSPFRARFE KGR + + IPTY+ Sbjct: 254 GILGSFAGSVALTLGALGGVYIGGGVALKLGELFTRSPFRARFEAKGRFTHYLQNIPTYL 313 Query: 312 ITAEYPAFTGVSAILADRL 330 ITAEYPAF GVSAILA++L Sbjct: 314 ITAEYPAFLGVSAILAEQL 332 >ref|YP_109210.1| bifunctional glucokinase/RpiR family transcriptional regulator [Burkholderia pseudomallei K96243] ref|YP_001060014.1| glucokinase [Burkholderia pseudomallei 668] ref|ZP_01767057.1| glucokinase [Burkholderia pseudomallei 305] sp|Q63RQ7|GLK_BURPS RecName: Full=Bifunctional protein glk; Includes: RecName: Full=Glucokinase; AltName: Full=Glucose kinase; Includes: RecName: Full=Putative HTH-type transcriptional regulator emb|CAH36622.1| glucokinase [Burkholderia pseudomallei K96243] gb|ABN81864.1| glucokinase [Burkholderia pseudomallei 668] gb|EBA48436.1| glucokinase [Burkholderia pseudomallei 305] Length = 641 Score = 345 bits (885), Expect = 5e-93, Method: Composition-based stats. Identities = 198/329 (60%), Positives = 242/329 (73%), Gaps = 2/329 (0%) Query: 3 APTPSSSKPPHAGGPRLLADIGGTNARFALETSPGHIEQVQVLRGADYPQFTDAVQAYLK 62 A T +++ HA GPRLLAD+GGTNARFALET PG I Q++V GA+YP TDA++ YLK Sbjct: 5 AQTKAAAASQHADGPRLLADVGGTNARFALETGPGEITQIRVYPGAEYPTLTDAIRKYLK 64 Query: 63 LAGQPAVKHAVVAIANPVQGDQIKMTNHDWAFSIEAARQLLGFDLLLVVNDFTALSMAVP 122 A V HA +AIANPV GDQ++MTNH+W+FSIEA R+ LGFD LLVVNDFTAL+MA+P Sbjct: 65 DAKIGRVNHAAIAIANPVDGDQVRMTNHNWSFSIEATRRALGFDTLLVVNDFTALAMALP 124 Query: 123 QLRTDELQQIGGGAPKAQHPVGLVGAGTGLGVGGLVRGDGHWLPLASEGGHVAFAPANAR 182 L + QIGGGA + +GL+G GTGLGV GL+ D W+ L SEGGH FAP + R Sbjct: 125 GLTDAQRVQIGGGARRQNSVIGLMGPGTGLGVSGLIPADDRWIALGSEGGHATFAPMDER 184 Query: 183 EAAVLAYAWQFHEHVSAERMVSGPGLEFIHRALLAIEGHP-AAELKAAEIVDGALKQGDA 241 E VL YA + + HVS ER+ +GPG+E I+RAL A + AA + A+IV+ A GDA Sbjct: 185 EDLVLQYARRKYPHVSFERVCAGPGMEIIYRALAARDKKRIAANVDTADIVERA-HAGDA 243 Query: 242 VCLETLDLFCSMLGTVAADLALTLGALGGIYIGGGVVPHLGEYFARSPFRARFENKGRMS 301 + LE ++ FC++LGT A +LA+TLGALGGIYIGGGVVP LGE F RSPFRARFE KGR Sbjct: 244 LALEAVECFCAILGTFAGNLAVTLGALGGIYIGGGVVPKLGELFMRSPFRARFEAKGRFE 303 Query: 302 VLTKAIPTYVITAEYPAFTGVSAILADRL 330 IPTY+ITAEYPAF GVSAILA++L Sbjct: 304 AYLANIPTYLITAEYPAFLGVSAILAEQL 332