BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4443.p (1152 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776958.1| DNA polymerase III subunit alpha [Herbaspiri... 2328 0.0 ref|YP_004751696.1| DNA polymerase III subunit alpha [Collimonas... 1885 0.0 ref|YP_001352224.1| DNA polymerase III alpha subunit [Janthinoba... 1819 0.0 ref|YP_001098801.1| DNA polymerase III subunit alpha [Herminiimo... 1807 0.0 ref|ZP_08274797.1| DNA polymerase III alpha subunit [Oxalobacter... 1787 0.0 >ref|YP_003776958.1| DNA polymerase III subunit alpha [Herbaspirillum seropedicae SmR1] gb|ADJ65050.1| DNA polymerase III (alpha chain) protein [Herbaspirillum seropedicae SmR1] Length = 1152 Score = 2328 bits (6033), Expect = 0.0, Method: Composition-based stats. Identities = 1137/1152 (98%), Positives = 1149/1152 (99%) Query: 1 MTTPQFVHLRMHSEYSIVDGLVRIDDIVKAAAKDGQAALAVTDLANLFCMVRFYKEARGK 60 MTTPQFVHLRMHSEYSIVDGLVRIDDIVKAAAKDGQAALAVTDLANLFCMVRFYKEARGK Sbjct: 1 MTTPQFVHLRMHSEYSIVDGLVRIDDIVKAAAKDGQAALAVTDLANLFCMVRFYKEARGK 60 Query: 61 GVKPIAGCDLWITNDADREKPFRLLVLIKSRHGYLQLCEVLSQAWLTNQYKGRAEVRMEW 120 GVKPIAGCDLWITNDADREKPFRLLVLIK+RHGYLQLCEVLSQAWL NQYKGRAEVRMEW Sbjct: 61 GVKPIAGCDLWITNDADREKPFRLLVLIKNRHGYLQLCEVLSQAWLNNQYKGRAEVRMEW 120 Query: 121 LDALRHQEGGNGLIALSGAAMGDIGQAIDNGNLAQAEACARRWSEIFPGAFYLELQRAGQ 180 LDALRHQEGGNGLIALSGAAMGDIGQAIDNGNLAQAEACARRW+EIFPGAFYLELQRAGQ Sbjct: 121 LDALRHQEGGNGLIALSGAAMGDIGQAIDNGNLAQAEACARRWAEIFPGAFYLELQRAGQ 180 Query: 181 ANMELQVRQSVALGAKLGLPCVATHPIQFQSPEEFIAHEARTCIAEGEIMANARRVRRFN 240 ANME+QVRQSVALGAKLGLPCVATHPIQFQSPEEFIAHEARTCIAEGEIMANARRVRRFN Sbjct: 181 ANMEVQVRQSVALGAKLGLPCVATHPIQFQSPEEFIAHEARTCIAEGEIMANARRVRRFN 240 Query: 241 EQQYFKSQAEMAELFADLPGAIANTVEIAKRCNLVLQLGKPQLPDFPTPDGMTIDDFLVA 300 EQQYFKSQAEM ELFADLPGA+ANTVEIAKRCNLVLQLGKPQLPDFPTPDGMTIDDFLVA Sbjct: 241 EQQYFKSQAEMVELFADLPGAVANTVEIAKRCNLVLQLGKPQLPDFPTPDGMTIDDFLVA 300 Query: 301 QTKAGLEVRLKELFPNEAEREKQRPRYEARLEFENNTIIKMKFPGYFLIVADFIQWAKNN 360 QTKAGLEVRLKELFPNEAEREKQRPRYEARLEFENNTIIKMKFPGYFLIVADFIQWAKNN Sbjct: 301 QTKAGLEVRLKELFPNEAEREKQRPRYEARLEFENNTIIKMKFPGYFLIVADFIQWAKNN 360 Query: 361 GVPVGPGRGSGAGSLVAYCLLITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDRV 420 GVPVGPGRGSGAGSLVAYCLLITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDRV Sbjct: 361 GVPVGPGRGSGAGSLVAYCLLITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDRV 420 Query: 421 IQYVKDRYGKEAVSQIATFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLA 480 IQYVKDRYGKEAVSQIATFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLA Sbjct: 421 IQYVKDRYGKEAVSQIATFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLA 480 Query: 481 DAIEEEPLLKERLENEEEVKQLMGLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQG 540 DAIEEEPLLKERLENEEEVKQLMGLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQG Sbjct: 481 DAIEEEPLLKERLENEEEVKQLMGLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQG 540 Query: 541 GDSGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIRMLDPAMADFDLAKLPLDDR 600 GDSGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIRMLDPAMADFDLAKLPLDDR Sbjct: 541 GDSGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIRMLDPAMADFDLAKLPLDDR 600 Query: 601 PSYELLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKH 660 PSYELLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKH Sbjct: 601 PSYELLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKH 660 Query: 661 GEAFDYPDPRTEGILSETYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAK 720 GEAFDYPDPRTEGILSETYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAK Sbjct: 661 GEAFDYPDPRTEGILSETYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAK 720 Query: 721 HRELFREGAAKNGLDQAKADEIFDLMEKFAGYGFNKSHAAAYALLSYYTAYLKAHHPAAF 780 HRELFREGAAKNGLDQAKADEIFDLMEKFAGYGFNKSHAAAYALLSYYTAYLKAHHPAAF Sbjct: 721 HRELFREGAAKNGLDQAKADEIFDLMEKFAGYGFNKSHAAAYALLSYYTAYLKAHHPAAF 780 Query: 781 MAANLSLAMEDTDKVKILIEDSIDICKLAILPPDINKSDYRFMPVGEPGKKATQIRYGLG 840 MAANLSLAMEDTDKVKILIED+IDICKLAILPPDINKSDYRFMPVGEPGKKATQIRYGLG Sbjct: 781 MAANLSLAMEDTDKVKILIEDAIDICKLAILPPDINKSDYRFMPVGEPGKKATQIRYGLG 840 Query: 841 AVKGAGQNAIEAILEARKSGPFKDLFDFAKRVDKKQINRRTIDSLIRAGAFDCFKVDRAI 900 AVKGAGQNAIEAILEARKSGPFKDLFDFAKRVDKKQINRRTIDSLIRAGAFDCFKVDRA+ Sbjct: 841 AVKGAGQNAIEAILEARKSGPFKDLFDFAKRVDKKQINRRTIDSLIRAGAFDCFKVDRAV 900 Query: 901 LQASVNLAWESAEQAEKSANQVSLFGGDDSDLEAPLEYVQVPAWSDKQRLTEEKGALGFY 960 LQASVNLAWESAEQAEKSANQVSLFGGDDSDLEAPLEYVQVP WSDKQRLTEEKGALGFY Sbjct: 901 LQASVNLAWESAEQAEKSANQVSLFGGDDSDLEAPLEYVQVPPWSDKQRLTEEKGALGFY 960 Query: 961 LSGHLFSAYEKEVRRFVRTKIASLEPSWEPRSLAGIITGVRVQMTQRGKLVICTLDDGTG 1020 LSGHLFSAYEKEVRRFVRTKIASLEPSWEPRSLAGIITGVRVQMTQRGKLVICTLDDGTG Sbjct: 961 LSGHLFSAYEKEVRRFVRTKIASLEPSWEPRSLAGIITGVRVQMTQRGKLVICTLDDGTG 1020 Query: 1021 VIEATIYNELFEPFKHLIKEDELLVVSGKVSEDRFNGGLRVAADKVMDLGAARIQYGVRM 1080 VIEATIYNELFEPFKHLIKEDELLVVSGKVSEDRFNGGLRVAADKVMDLGAARIQYGVRM Sbjct: 1021 VIEATIYNELFEPFKHLIKEDELLVVSGKVSEDRFNGGLRVAADKVMDLGAARIQYGVRM 1080 Query: 1081 VVSINKAVDPNHLRDTLAAHRQEQGLPFVMKYRQSDAACEVVLGDAWRVNPSDSLQSTLV 1140 VVSINKA+DPNHLRDTL+AHRQEQGLPFVM+Y+Q+DAACEVVLGDAWR+NPSDSLQSTLV Sbjct: 1081 VVSINKAIDPNHLRDTLSAHRQEQGLPFVMRYQQADAACEVVLGDAWRINPSDSLQSTLV 1140 Query: 1141 ASFGKEAVVVEY 1152 ASFGKEAVVVEY Sbjct: 1141 ASFGKEAVVVEY 1152 >ref|YP_004751696.1| DNA polymerase III subunit alpha [Collimonas fungivorans Ter331] gb|AEK60873.1| DNA polymerase III alpha subunit [Collimonas fungivorans Ter331] Length = 1213 Score = 1885 bits (4883), Expect = 0.0, Method: Composition-based stats. Identities = 909/1155 (78%), Positives = 1015/1155 (87%), Gaps = 3/1155 (0%) Query: 1 MTTPQFVHLRMHSEYSIVDGLVRIDDIVKAAAKDGQAALAVTDLANLFCMVRFYKEARGK 60 MTTPQF+HLR+HSEYSIVDGLVRIDD+VKAAA D QAAL ++DLANLF MV+FYK ARGK Sbjct: 59 MTTPQFIHLRLHSEYSIVDGLVRIDDVVKAAAGDKQAALGISDLANLFGMVKFYKAARGK 118 Query: 61 GVKPIAGCDLWITNDADREKPFRLLVLIKSRHGYLQLCEVLSQAWLTNQYKGRAEVRMEW 120 G+KPI GCD+WITND DR+KP RLL+L+K+R GYLQLCE+LS+AWL N ++GRAE+R EW Sbjct: 119 GIKPIIGCDVWITNDDDRDKPSRLLLLVKNRRGYLQLCELLSRAWLENLHRGRAEIRAEW 178 Query: 121 LDALRHQEGGNGLIALSGAAMGDIGQAIDNGNLAQAEACARRWSEIFPGAFYLELQRAGQ 180 L L Q GGNGLIALSGA GDIG AIDNGN AE C RW+ IFP FY+E+QRA Q Sbjct: 179 LAELTQQNGGNGLIALSGAHFGDIGIAIDNGNTGLAERCIERWAAIFPDNFYVEIQRADQ 238 Query: 181 ANMELQVRQSVALGAKLGLPCVATHPIQFQSPEEFIAHEARTCIAEGEIMANARRVRRFN 240 NME VRQ+VAL AK G+P VATHPIQF EEFIAHEARTCIAEGE++ANARRVRRFN Sbjct: 239 PNMEAHVRQAVALAAKFGVPVVATHPIQFLDKEEFIAHEARTCIAEGEMLANARRVRRFN 298 Query: 241 EQQYFKSQAEMAELFADLPGAIANTVEIAKRCNLVLQLGKPQLPDFPTPDGMTIDDFLVA 300 +QQ FK+QAEMAELFAD+P A+ N++EIAKRCNL LQLGKPQLPDFPTPDGMTI DFL+ Sbjct: 299 DQQSFKTQAEMAELFADMPAALQNSIEIAKRCNLTLQLGKPQLPDFPTPDGMTIGDFLIQ 358 Query: 301 QTKAGLEVRLKELFPNEAEREKQRPRYEARLEFENNTIIKMKFPGYFLIVADFIQWAKNN 360 Q++ GLE+RL LFP++A+RE+QR RY+ RL+FE +TIIKM FPGYFLIVA+FI+WAK N Sbjct: 359 QSQEGLELRLLHLFPDQAKREQQRQRYQDRLKFETDTIIKMGFPGYFLIVAEFIRWAKQN 418 Query: 361 GVPVGPGRGSGAGSLVAYCLLITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDRV 420 GVPVGPGRGSGAGSLVAY L ITDLDPL+YNLLFERFLNPERVSMPDFDIDFCQEGRDRV Sbjct: 419 GVPVGPGRGSGAGSLVAYSLQITDLDPLKYNLLFERFLNPERVSMPDFDIDFCQEGRDRV 478 Query: 421 IQYVKDRYGKEAVSQIATFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLA 480 IQ+VKD YGK+AVSQIATFGTMAAKGA+RDVGRVLD GYNFCDGISKLIPFKPGK VT+A Sbjct: 479 IQHVKDLYGKDAVSQIATFGTMAAKGAIRDVGRVLDFGYNFCDGISKLIPFKPGKHVTIA 538 Query: 481 DAIEEEPLLKERLENEEEVKQLMGLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQG 540 DAI+EEP+L ERLENEEEVKQL+ LAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQG Sbjct: 539 DAIQEEPMLAERLENEEEVKQLLNLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQG 598 Query: 541 GDSGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIRMLDPAMADFDLAKLPLDDR 600 GD+GVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYI+ LDPAMADF L KLPL+DR Sbjct: 599 GDAGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIKQLDPAMADFSLEKLPLNDR 658 Query: 601 PSYELLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKH 660 PSYELLT AKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKH Sbjct: 659 PSYELLTAAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKH 718 Query: 661 GEAFDYPDPRTEGILSETYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAK 720 GE FDYPDPRTEGILSETYGIMVYQEQVMQMAQV+GGYSLGGADLLRRAMGKKKAEEMA+ Sbjct: 719 GERFDYPDPRTEGILSETYGIMVYQEQVMQMAQVVGGYSLGGADLLRRAMGKKKAEEMAE 778 Query: 721 HRELFREGAAKNGLDQAKADEIFDLMEKFAGYGFNKSHAAAYALLSYYTAYLKAHHPAAF 780 HR++FR+GAAK+GL +AKADEIFDLMEKFAGYGFNKSHAAAYALLSY+TAYLKAHHPAAF Sbjct: 779 HRQIFRDGAAKDGLTEAKADEIFDLMEKFAGYGFNKSHAAAYALLSYHTAYLKAHHPAAF 838 Query: 781 MAANLSLAMEDTDKVKILIEDSIDICKLAILPPDINKSDYRFMPVGEPGKKATQIRYGLG 840 MAANLSLAM+DT+K+KIL+EDS+ +CKL +LPPDIN SDYRF P GEPGKKAT IRYGLG Sbjct: 839 MAANLSLAMDDTEKIKILVEDSLVVCKLTLLPPDINLSDYRFTPEGEPGKKATFIRYGLG 898 Query: 841 AVKGAGQNAIEAILEARKSGPFKDLFDFAKRVDKKQINRRTIDSLIRAGAFDCFKVDRAI 900 AVKG+GQNAIEAI+ AR+ PF DLFDF RVDK+QINRRTI+SLIRAGAFDCFKVDR I Sbjct: 899 AVKGSGQNAIEAIIAARQEKPFVDLFDFCLRVDKRQINRRTIESLIRAGAFDCFKVDRGI 958 Query: 901 LQASVNLAWESAEQAEKSANQVSLFGGDDSDLEAPLEYVQVPAWSDKQRLTEEKGALGFY 960 L ASV A E+A+Q SANQVSLFGGDDSDLEAP+EYVQ W+DKQ+LTEEK ALGFY Sbjct: 959 LLASVPRAMEAADQKLASANQVSLFGGDDSDLEAPIEYVQAAPWTDKQKLTEEKSALGFY 1018 Query: 961 LSGHLFSAYEKEVRRFVRTKIASLEPSWEPRSLAGIITGVRVQMTQRGKLVICTLDDGTG 1020 LSGHLF AY E RRF RT + SLEPS EPR LAGII+G+R QMTQRGK++I TLDDG+ Sbjct: 1019 LSGHLFHAYAAEARRFARTPLGSLEPSREPRVLAGIISGLRAQMTQRGKMMIVTLDDGSA 1078 Query: 1021 VIEATIYNELFEPFKHLIKEDELLVVSGKVSEDRFNGGLRVAADKVMDLGAARIQYGVRM 1080 ++ T+YNE FEP K KEDE LVV GKVSEDRFNGGLRV+A+KVMD+ ARIQYG ++ Sbjct: 1079 TVDVTVYNEQFEPNKAFFKEDEFLVVHGKVSEDRFNGGLRVSAEKVMDIATARIQYGRQI 1138 Query: 1081 VVSIN---KAVDPNHLRDTLAAHRQEQGLPFVMKYRQSDAACEVVLGDAWRVNPSDSLQS 1137 V+S++ + +D L+D L++HR GLP ++Y ACE++LGD WRV+PSD LQ Sbjct: 1139 VLSLSSPAQKIDATQLKDMLSSHRSGNGLPMTLRYTGDGVACEILLGDEWRVSPSDGLQL 1198 Query: 1138 TLVASFGKEAVVVEY 1152 LV GKEAV VEY Sbjct: 1199 ALVEKVGKEAVAVEY 1213 >ref|YP_001352224.1| DNA polymerase III alpha subunit [Janthinobacterium sp. Marseille] gb|ABR89120.1| DNA polymerase III alpha subunit [Janthinobacterium sp. Marseille] Length = 1152 Score = 1819 bits (4712), Expect = 0.0, Method: Composition-based stats. Identities = 875/1152 (75%), Positives = 1007/1152 (87%), Gaps = 1/1152 (0%) Query: 1 MTTPQFVHLRMHSEYSIVDGLVRIDDIVKAAAKDGQAALAVTDLANLFCMVRFYKEARGK 60 M +PQF+HLR+HSEYSIVDGL+RIDD+++AAA D Q ALA++DLANLF MV+FYKEAR Sbjct: 1 MISPQFIHLRLHSEYSIVDGLIRIDDVIQAAAADMQPALAISDLANLFGMVKFYKEARSN 60 Query: 61 GVKPIAGCDLWITNDADREKPFRLLVLIKSRHGYLQLCEVLSQAWLTNQYKGRAEVRMEW 120 G+KPI GCD+WI+ND DR+KP RLL+L+K++ GYLQLCE+LS+AWLTN ++GRAE+R EW Sbjct: 61 GIKPIVGCDVWISNDNDRDKPSRLLLLVKNKDGYLQLCELLSKAWLTNLHRGRAEIRPEW 120 Query: 121 LDALRHQEGGNGLIALSGAAMGDIGQAIDNGNLAQAEACARRWSEIFPGAFYLELQRAGQ 180 L+ + +G NGLI LSGA GD+G AIDNGNL AE CA+RW+E+FPG FY+E+QRAGQ Sbjct: 121 LEQVA-ADGKNGLIVLSGAHFGDVGIAIDNGNLGAAERCAQRWAELFPGHFYIEVQRAGQ 179 Query: 181 ANMELQVRQSVALGAKLGLPCVATHPIQFQSPEEFIAHEARTCIAEGEIMANARRVRRFN 240 NM+ VRQ+ L AKLGLP VATHP+QF EEF AHEARTCI+EGEI+AN RR++RFN Sbjct: 180 PNMDGHVRQASVLAAKLGLPLVATHPVQFLGLEEFTAHEARTCISEGEILANPRRIKRFN 239 Query: 241 EQQYFKSQAEMAELFADLPGAIANTVEIAKRCNLVLQLGKPQLPDFPTPDGMTIDDFLVA 300 EQQ FK+QAEMAELFAD+P A+ N+VEIAKRCNLVL+LGKP+LP+FPTPDG +ID+FLV Sbjct: 240 EQQRFKTQAEMAELFADMPNALQNSVEIAKRCNLVLELGKPKLPNFPTPDGSSIDEFLVK 299 Query: 301 QTKAGLEVRLKELFPNEAEREKQRPRYEARLEFENNTIIKMKFPGYFLIVADFIQWAKNN 360 + + GL+ R++ L+P+ A REK R RY+ARL+FE +TIIKM FPGYFLIVADFI+WAKNN Sbjct: 300 EAQRGLDQRMEHLYPDPAAREKHRERYQARLKFETDTIIKMGFPGYFLIVADFIKWAKNN 359 Query: 361 GVPVGPGRGSGAGSLVAYCLLITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDRV 420 GVPVGPGRGSGAGSLVAY LLITDLDPL+YNLLFERFLNPERVSMPDFDIDFCQEGRDRV Sbjct: 360 GVPVGPGRGSGAGSLVAYSLLITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQEGRDRV 419 Query: 421 IQYVKDRYGKEAVSQIATFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLA 480 IQYVKD+YGK+AVSQIATFGTMAAKGAVRDVGRVLD GYNFCDGISKLIPFKPGKLVT++ Sbjct: 420 IQYVKDQYGKDAVSQIATFGTMAAKGAVRDVGRVLDFGYNFCDGISKLIPFKPGKLVTIS 479 Query: 481 DAIEEEPLLKERLENEEEVKQLMGLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQG 540 DAI+EEPLL ERLENEEEVKQL+ LAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQG Sbjct: 480 DAIKEEPLLAERLENEEEVKQLLDLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQG 539 Query: 541 GDSGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIRMLDPAMADFDLAKLPLDDR 600 GD+GVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYI+ LDPAMADF L KLPL+DR Sbjct: 540 GDAGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIKDLDPAMADFALEKLPLNDR 599 Query: 601 PSYELLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKH 660 PSYELLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFC+RKH Sbjct: 600 PSYELLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCRRKH 659 Query: 661 GEAFDYPDPRTEGILSETYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAK 720 GE F+YPDPRTE ILSETYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMA+ Sbjct: 660 GERFEYPDPRTESILSETYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAE 719 Query: 721 HRELFREGAAKNGLDQAKADEIFDLMEKFAGYGFNKSHAAAYALLSYYTAYLKAHHPAAF 780 HRELFR GA+KN L KADEIFDLMEKFAGYGFNKSHAAAYALLSY+TAYLKAHHPAAF Sbjct: 720 HRELFRAGASKNDLSAEKADEIFDLMEKFAGYGFNKSHAAAYALLSYHTAYLKAHHPAAF 779 Query: 781 MAANLSLAMEDTDKVKILIEDSIDICKLAILPPDINKSDYRFMPVGEPGKKATQIRYGLG 840 MAANLSLAM+DTDK+KIL+ED+IDIC L++LPPDIN+SDYRF PVG PGKKATQIRYGLG Sbjct: 780 MAANLSLAMDDTDKIKILVEDAIDICGLSLLPPDINQSDYRFTPVGVPGKKATQIRYGLG 839 Query: 841 AVKGAGQNAIEAILEARKSGPFKDLFDFAKRVDKKQINRRTIDSLIRAGAFDCFKVDRAI 900 AVKG+G+ AI+A++EARK PF DLFDFAKRVDK+QINRRTIDSLIRAGAFDCF VDRAI Sbjct: 840 AVKGSGKGAIDAVIEARKERPFTDLFDFAKRVDKRQINRRTIDSLIRAGAFDCFDVDRAI 899 Query: 901 LQASVNLAWESAEQAEKSANQVSLFGGDDSDLEAPLEYVQVPAWSDKQRLTEEKGALGFY 960 L ASV A E AEQAE +ANQVSLFGGDDSDLE P EYV+V WSDKQ+LTEEK ALGFY Sbjct: 900 LLASVAFAMECAEQAEAAANQVSLFGGDDSDLETPPEYVKVSPWSDKQKLTEEKAALGFY 959 Query: 961 LSGHLFSAYEKEVRRFVRTKIASLEPSWEPRSLAGIITGVRVQMTQRGKLVICTLDDGTG 1020 LSGHLF+AY E RRF R K++SLEPS EPR++AG+I+G+R QMTQRG++ I TLDDG+ Sbjct: 960 LSGHLFNAYADEARRFARAKLSSLEPSREPRTIAGVISGLRTQMTQRGRITIVTLDDGSA 1019 Query: 1021 VIEATIYNELFEPFKHLIKEDELLVVSGKVSEDRFNGGLRVAADKVMDLGAARIQYGVRM 1080 ++ T+YNEL++ +H+ KEDE L V+GKVSEDRF+GGLR+ A+KVMD+ RIQY + Sbjct: 1020 TVDVTVYNELYDANRHMFKEDEFLAVTGKVSEDRFSGGLRITAEKVMDIAGVRIQYANCV 1079 Query: 1081 VVSINKAVDPNHLRDTLAAHRQEQGLPFVMKYRQSDAACEVVLGDAWRVNPSDSLQSTLV 1140 +S+ + D N L+ TL + G P V++Y+ E+ + WR+NP D+++ L+ Sbjct: 1080 RLSLPASTDINVLKATLQPAARADGSPVVIQYQNPKGVSELCFAEQWRINPDDNIKQKLI 1139 Query: 1141 ASFGKEAVVVEY 1152 + + V + Y Sbjct: 1140 DLYSDKNVQIAY 1151 >ref|YP_001098801.1| DNA polymerase III subunit alpha [Herminiimonas arsenicoxydans] emb|CAL60672.1| DNA polymerase III, alpha subunit [Herminiimonas arsenicoxydans] Length = 1153 Score = 1807 bits (4681), Expect = 0.0, Method: Composition-based stats. Identities = 869/1152 (75%), Positives = 1001/1152 (86%) Query: 1 MTTPQFVHLRMHSEYSIVDGLVRIDDIVKAAAKDGQAALAVTDLANLFCMVRFYKEARGK 60 M +PQF+HLR+HSEYSIVDGLVRIDD++ AAA D Q +LA+TDLANLF MV+FYKEAR K Sbjct: 1 MISPQFIHLRLHSEYSIVDGLVRIDDVIAAAAADAQPSLAITDLANLFGMVKFYKEARSK 60 Query: 61 GVKPIAGCDLWITNDADREKPFRLLVLIKSRHGYLQLCEVLSQAWLTNQYKGRAEVRMEW 120 G+KPI GCD+WI+ND DR+KP RLL+L+K++ GYLQLCE+LS+AWLTN ++GRAE+R EW Sbjct: 61 GIKPIVGCDVWISNDNDRDKPSRLLLLVKNKTGYLQLCELLSKAWLTNLHRGRAEIRPEW 120 Query: 121 LDALRHQEGGNGLIALSGAAMGDIGQAIDNGNLAQAEACARRWSEIFPGAFYLELQRAGQ 180 L+ L + NGLI LSGA GDIG AIDNGNLA AE A+RW+++FPG FY+E+QRA Q Sbjct: 121 LEQLAAEGKPNGLIVLSGAHFGDIGMAIDNGNLAAAERHAKRWADMFPGHFYIEVQRAEQ 180 Query: 181 ANMELQVRQSVALGAKLGLPCVATHPIQFQSPEEFIAHEARTCIAEGEIMANARRVRRFN 240 NM+ VRQ+ L AKL LP VATHP+QF EF AHEARTCI+EGEI+AN RR++RFN Sbjct: 181 PNMDAHVRQASVLAAKLNLPLVATHPVQFLDQNEFTAHEARTCISEGEILANPRRIKRFN 240 Query: 241 EQQYFKSQAEMAELFADLPGAIANTVEIAKRCNLVLQLGKPQLPDFPTPDGMTIDDFLVA 300 E+Q F +QAEMAELFAD+P A+ N+VEIAKRCNL+L+LGKP+LP+FPTPDG +ID+FLV Sbjct: 241 ERQRFTTQAEMAELFADMPNALQNSVEIAKRCNLMLELGKPKLPNFPTPDGSSIDEFLVK 300 Query: 301 QTKAGLEVRLKELFPNEAEREKQRPRYEARLEFENNTIIKMKFPGYFLIVADFIQWAKNN 360 + + GLE RL+ L+P+ +REK R RY+ARL+FE +TII M FPGYFLIVADFI+WAKNN Sbjct: 301 EAQRGLEGRLQHLYPDPEQREKNRERYQARLKFETDTIIHMGFPGYFLIVADFIKWAKNN 360 Query: 361 GVPVGPGRGSGAGSLVAYCLLITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDRV 420 GVPVGPGRGSGAGSLVAY LLITDLDPL+YNLLFERFLNPERVSMPDFDIDFCQEGRDRV Sbjct: 361 GVPVGPGRGSGAGSLVAYSLLITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQEGRDRV 420 Query: 421 IQYVKDRYGKEAVSQIATFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLA 480 IQYVKD+YGK+AVSQIATFGTMAAKGAVRDVGRVLD GYNFCDGISKLIPFKPGKLVT+A Sbjct: 421 IQYVKDQYGKDAVSQIATFGTMAAKGAVRDVGRVLDFGYNFCDGISKLIPFKPGKLVTIA 480 Query: 481 DAIEEEPLLKERLENEEEVKQLMGLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQG 540 DAI+EEPLL ERLENEEEVKQL+ LAQ+VEGIARNIGMHAGGVLIAPGKLTDFCPLYTQG Sbjct: 481 DAIKEEPLLAERLENEEEVKQLLELAQKVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQG 540 Query: 541 GDSGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIRMLDPAMADFDLAKLPLDDR 600 GDSGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYI+ LDPAMADF L KLPL+DR Sbjct: 541 GDSGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIKDLDPAMADFSLEKLPLNDR 600 Query: 601 PSYELLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKH 660 PSY+LLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFC+RKH Sbjct: 601 PSYDLLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCRRKH 660 Query: 661 GEAFDYPDPRTEGILSETYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAK 720 GE F+YPDPRTE ILSETYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMA+ Sbjct: 661 GERFEYPDPRTEAILSETYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAQ 720 Query: 721 HRELFREGAAKNGLDQAKADEIFDLMEKFAGYGFNKSHAAAYALLSYYTAYLKAHHPAAF 780 HRELFR GAAKN L KADEIFDLMEKFAGYGFNKSHAAAYALLSY+TAYLKAHHPAAF Sbjct: 721 HRELFRAGAAKNDLSAEKADEIFDLMEKFAGYGFNKSHAAAYALLSYHTAYLKAHHPAAF 780 Query: 781 MAANLSLAMEDTDKVKILIEDSIDICKLAILPPDINKSDYRFMPVGEPGKKATQIRYGLG 840 MAANLSLAM+DTDK+KIL+ED++D+C L +LPPDIN+SDYRF PVG PGKKATQIRYGLG Sbjct: 781 MAANLSLAMDDTDKIKILVEDTLDVCGLTLLPPDINQSDYRFTPVGVPGKKATQIRYGLG 840 Query: 841 AVKGAGQNAIEAILEARKSGPFKDLFDFAKRVDKKQINRRTIDSLIRAGAFDCFKVDRAI 900 AVKG+G+ AI+AI+ AR+ PF DLFDF KRVDK+QINRRTIDSLIRAGAFDCF +DRA+ Sbjct: 841 AVKGSGKGAIDAIVNARQGKPFVDLFDFCKRVDKRQINRRTIDSLIRAGAFDCFNIDRAV 900 Query: 901 LQASVNLAWESAEQAEKSANQVSLFGGDDSDLEAPLEYVQVPAWSDKQRLTEEKGALGFY 960 L ASV A E AEQAE SANQVSLFGGDDSD+E P EYV+ WSDKQ+LTEEK ALGFY Sbjct: 901 LLASVGFAMECAEQAEASANQVSLFGGDDSDMETPPEYVKASPWSDKQKLTEEKAALGFY 960 Query: 961 LSGHLFSAYEKEVRRFVRTKIASLEPSWEPRSLAGIITGVRVQMTQRGKLVICTLDDGTG 1020 LSGHLF AY +EVRRF RTK+++LEPS EPR++AG+I+GVR QMTQRG+++I TLDDG+ Sbjct: 961 LSGHLFDAYAEEVRRFARTKLSNLEPSREPRTIAGVISGVRTQMTQRGRMIIVTLDDGSA 1020 Query: 1021 VIEATIYNELFEPFKHLIKEDELLVVSGKVSEDRFNGGLRVAADKVMDLGAARIQYGVRM 1080 ++ T+YNE+F+ ++L KEDE L VSGK+SEDRF+GGLR+ A+KVMD+ A RIQY + Sbjct: 1021 TVDVTVYNEVFDANRNLFKEDEFLAVSGKISEDRFSGGLRITAEKVMDIAAVRIQYAKCI 1080 Query: 1081 VVSINKAVDPNHLRDTLAAHRQEQGLPFVMKYRQSDAACEVVLGDAWRVNPSDSLQSTLV 1140 +S+ + D N L TL A + G P V++Y+ E+ + WR+NP D+ + L+ Sbjct: 1081 YLSLQASADVNTLMATLQAAARADGSPVVIQYQNQKGVSELRFAEQWRINPDDNTKQKLI 1140 Query: 1141 ASFGKEAVVVEY 1152 + ++ V + Y Sbjct: 1141 DLYSEKNVQIAY 1152 >ref|ZP_08274797.1| DNA polymerase III alpha subunit [Oxalobacteraceae bacterium IMCC9480] gb|EGF31739.1| DNA polymerase III alpha subunit [Oxalobacteraceae bacterium IMCC9480] Length = 1177 Score = 1787 bits (4629), Expect = 0.0, Method: Composition-based stats. Identities = 877/1152 (76%), Positives = 1007/1152 (87%), Gaps = 3/1152 (0%) Query: 1 MTTPQFVHLRMHSEYSIVDGLVRIDDIVKAAAKDGQAALAVTDLANLFCMVRFYKEARGK 60 MT+PQF HLR+HSEYSIVDGL+RIDD+V AAA D Q +LA+TDLANLF MV+FYK AR K Sbjct: 28 MTSPQFTHLRLHSEYSIVDGLIRIDDVVDAAAADSQPSLAITDLANLFGMVKFYKAARKK 87 Query: 61 GVKPIAGCDLWITNDADREKPFRLLVLIKSRHGYLQLCEVLSQAWLTNQYKGRAEVRMEW 120 G+KPI GCD+WITND DR+KP RLL+L K+ GYLQLCE++SQAWL+N ++GRAE+R EW Sbjct: 88 GIKPIIGCDVWITNDDDRDKPSRLLLLAKNAAGYLQLCELISQAWLSNLHRGRAEIRTEW 147 Query: 121 LDALRHQEGGNGLIALSGAAMGDIGQAIDNGNLAQAEACARRWSEIFPGAFYLELQRAGQ 180 L+ L NGLIAL+GA GD+G AI+NGNL AE A+RWS IFPG FY+E+QRAGQ Sbjct: 148 LEKL---SPANGLIALAGAHFGDVGIAIENGNLPAAERNAQRWSRIFPGHFYIEIQRAGQ 204 Query: 181 ANMELQVRQSVALGAKLGLPCVATHPIQFQSPEEFIAHEARTCIAEGEIMANARRVRRFN 240 N E QVRQ VAL A+L LP VATHPIQF + EEFIAHEARTCI+EGE++AN+RRVRRFN Sbjct: 205 PNQEAQVRQLVALAARLQLPVVATHPIQFLTKEEFIAHEARTCISEGEMLANSRRVRRFN 264 Query: 241 EQQYFKSQAEMAELFADLPGAIANTVEIAKRCNLVLQLGKPQLPDFPTPDGMTIDDFLVA 300 ++Q F +QAEMA LFADLP A+ N+ EIAKRCNL LQLGKP+LPDFPTP+GMTI DFLVA Sbjct: 265 DRQCFTTQAEMAGLFADLPAALQNSNEIAKRCNLTLQLGKPRLPDFPTPEGMTIGDFLVA 324 Query: 301 QTKAGLEVRLKELFPNEAEREKQRPRYEARLEFENNTIIKMKFPGYFLIVADFIQWAKNN 360 + ++GLE RL +L+P+E +RE +R RY RL+FE NTIIKM FPGYFLIVADFIQWAKNN Sbjct: 325 EARSGLERRLLQLYPDETKREAERQRYADRLDFETNTIIKMGFPGYFLIVADFIQWAKNN 384 Query: 361 GVPVGPGRGSGAGSLVAYCLLITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDRV 420 GVPVGPGRGSGAGSLVAY L ITDLDPL YNLLFERFLNPERVSMPDFDIDFCQEGRDRV Sbjct: 385 GVPVGPGRGSGAGSLVAYSLSITDLDPLEYNLLFERFLNPERVSMPDFDIDFCQEGRDRV 444 Query: 421 IQYVKDRYGKEAVSQIATFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLA 480 IQYVKDRYGKEAVSQIATFGTMAAKGA+RDVGRVLD+GYNFCDGISKLIPFKPGK VT+A Sbjct: 445 IQYVKDRYGKEAVSQIATFGTMAAKGAIRDVGRVLDMGYNFCDGISKLIPFKPGKQVTIA 504 Query: 481 DAIEEEPLLKERLENEEEVKQLMGLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQG 540 DAI EEPLL ER ENE+EV+QL+ LAQQVEGIARNIGMHAGGV+IAPGKLTDFCPLYTQG Sbjct: 505 DAILEEPLLAERQENEDEVRQLLDLAQQVEGIARNIGMHAGGVVIAPGKLTDFCPLYTQG 564 Query: 541 GDSGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIRMLDPAMADFDLAKLPLDDR 600 GD+GVVSQYDKDDVEAVGLVKFDFLGLTTLTILD AVRYI+ LDPAMADF L KLPL+D+ Sbjct: 565 GDAGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAVRYIKRLDPAMADFSLEKLPLNDK 624 Query: 601 PSYELLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKH 660 SY+LLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFC+RKH Sbjct: 625 ASYDLLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCRRKH 684 Query: 661 GEAFDYPDPRTEGILSETYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAK 720 GE FDYPDPRTEGILSETYGIMVYQEQVMQMAQV+GGYSLGGADLLRRAMGKKKAEEMA+ Sbjct: 685 GERFDYPDPRTEGILSETYGIMVYQEQVMQMAQVVGGYSLGGADLLRRAMGKKKAEEMAE 744 Query: 721 HRELFREGAAKNGLDQAKADEIFDLMEKFAGYGFNKSHAAAYALLSYYTAYLKAHHPAAF 780 HR++FR+GAAK+GL +AKADEIFDLMEKFAGYGFNKSHAAAYALL+Y+TAYLKAHHPAAF Sbjct: 745 HRQIFRDGAAKDGLSEAKADEIFDLMEKFAGYGFNKSHAAAYALLAYHTAYLKAHHPAAF 804 Query: 781 MAANLSLAMEDTDKVKILIEDSIDICKLAILPPDINKSDYRFMPVGEPGKKATQIRYGLG 840 MAANLSLAM+DT+K++IL+ED ID+C + +LPPDIN+SDYRF PVGEPGK+A QIRYGLG Sbjct: 805 MAANLSLAMDDTEKIRILVEDVIDVCAMTLLPPDINQSDYRFTPVGEPGKRAKQIRYGLG 864 Query: 841 AVKGAGQNAIEAILEARKSGPFKDLFDFAKRVDKKQINRRTIDSLIRAGAFDCFKVDRAI 900 AVKG+GQ AIEAI+ AR SGPF DLFDFAKRVDK+Q+NRRT+DSLIRAGAFDCF+VDRA+ Sbjct: 865 AVKGSGQGAIEAIVAARASGPFTDLFDFAKRVDKRQVNRRTVDSLIRAGAFDCFEVDRAV 924 Query: 901 LQASVNLAWESAEQAEKSANQVSLFGGDDSDLEAPLEYVQVPAWSDKQRLTEEKGALGFY 960 L ASV LA E+AEQ E S NQVSLFGGDDSDL+ EY++V W+DKQRLTEEK ALGFY Sbjct: 925 LLASVALALEAAEQHEASINQVSLFGGDDSDLDTQPEYLKVAPWTDKQRLTEEKTALGFY 984 Query: 961 LSGHLFSAYEKEVRRFVRTKIASLEPSWEPRSLAGIITGVRVQMTQRGKLVICTLDDGTG 1020 LSGHLF++Y +EVRRF RTK++SLEPS +PR +AGII +RVQMTQRGK+VI TLDD + Sbjct: 985 LSGHLFNSYAEEVRRFARTKLSSLEPSRDPRMIAGIIVSLRVQMTQRGKMVIVTLDDSSA 1044 Query: 1021 VIEATIYNELFEPFKHLIKEDELLVVSGKVSEDRFNGGLRVAADKVMDLGAARIQYGVRM 1080 ++ T+YNE+++ K + KEDE L VSGKVSEDRF+GGLR+ A+KVMD+ AARIQYG ++ Sbjct: 1045 TVDVTVYNEIYDANKRMFKEDEFLCVSGKVSEDRFSGGLRITAEKVMDIAAARIQYGKQI 1104 Query: 1081 VVSINKAVDPNHLRDTLAAHRQEQGLPFVMKYRQSDAACEVVLGDAWRVNPSDSLQSTLV 1140 ++ + +D ++ L +R E GLPF+++Y Q+ A CE+ L D W+V P+D L+ L Sbjct: 1105 TLAHSGKLDAAQIKTLLTPYRSEAGLPFLLRYTQAGAECELRLADEWKVLPADGLKQALA 1164 Query: 1141 ASFGKEAVVVEY 1152 G+E V EY Sbjct: 1165 EKMGRECVEFEY 1176