BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4441.p (367 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002004855.1| glycosyl transferase [Cupriavidus taiwanensi... 210 3e-52 ref|YP_001899964.1| glycosyl transferase family 25 [Ralstonia pi... 205 1e-50 ref|YP_002981955.1| glycosyl transferase family 25 [Ralstonia pi... 202 9e-50 ref|YP_004684694.1| glycosyltransferase involved in LPS biosynth... 199 4e-49 ref|YP_725417.1| glycosyltransferase involved in LPS biosynthesi... 196 7e-48 >ref|YP_002004855.1| glycosyl transferase [Cupriavidus taiwanensis LMG 19424] emb|CAQ68786.1| glycosyl transferase [Cupriavidus taiwanensis LMG 19424] Length = 256 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 116/251 (46%), Positives = 162/251 (64%), Gaps = 4/251 (1%) Query: 9 VHCFVINLATDVARRETISAQLDRLQIPHTIFPAVDGRLLSEEELSERYDRARAIEESHD 68 + +VINL ARR+ I+ QL RL +P +FPAV+GR L+E+E++ RYD A Sbjct: 2 IGAYVINLEAAEARRQRIAGQLTRLGVPFQVFPAVNGRALAEDEVARRYDAQAASASYRP 61 Query: 69 LTRGEIGCALSHHGVYCEMVRQGITHALVLEDDARLNDQVPGLLPRLAQMYPAEVSQVVM 128 ++RGEIGCALSH GVY +M+ G + ALVLEDDA L D VP +L LA + + VV+ Sbjct: 62 MSRGEIGCALSHLGVYRKMLEDGASLALVLEDDALLGDDVPAVLEALASKMDPDSADVVL 121 Query: 129 LNYVEKYSRNRMIQLDDTHKLVSTYGGNKNAHGYFLTLGAARKLSENLFPIWLVADRWER 188 L++V+K++R + L KLV YG AHGY +T AA +L L P W AD W Sbjct: 122 LSHVDKFTRWGIKPLGQ-RKLVRRYGEWWRAHGYVVTRAAAERLVAGLQPTWCAADYWSA 180 Query: 189 FKEKKFIRLKALLPYCIGLTTLAQDSNLNTDRVARMELY--PRGGLMYYLHRYLYKKFIY 246 F+ + + ++A++PYCIGLT LA+ S+L T R A ++ R + YYL RY+Y++F++ Sbjct: 181 FERRGLVSVRAVVPYCIGLTELAEASSLETHR-ADLDATDKARRSVGYYLRRYVYQRFLF 239 Query: 247 QLFVRPFLRVA 257 Q+FVRPFLRVA Sbjct: 240 QVFVRPFLRVA 250 >ref|YP_001899964.1| glycosyl transferase family 25 [Ralstonia pickettii 12J] ref|ZP_07676481.1| LPS glycosyltransferase subfamily [Ralstonia sp. 5_7_47FAA] gb|ACD27532.1| glycosyl transferase family 25 [Ralstonia pickettii 12J] gb|EFP65053.1| LPS glycosyltransferase subfamily [Ralstonia sp. 5_7_47FAA] Length = 260 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 105/249 (42%), Positives = 151/249 (60%), Gaps = 1/249 (0%) Query: 9 VHCFVINLATDVARRETISAQLDRLQIPHTIFPAVDGRLLSEEELSERYDRARAIEESHD 68 V F INL D RRE + QLD L +PH FP V G+ L +EL+ YD ARA +S + Sbjct: 5 VPTFFINLDHDAGRREALERQLDALGLPHQRFPGVYGKTLPADELARHYDHARATSQSRE 64 Query: 69 LTRGEIGCALSHHGVYCEMVRQGITHALVLEDDARLNDQVPGLLPRLAQMYPAEVSQVVM 128 LT GE+GCALSH GVY M+ Q + +AL+LEDDA+L VP +L LAQ + V + Sbjct: 65 LTVGEVGCALSHLGVYRAMIEQNLPYALILEDDAKLGPDVPAVLDALAQSVSPDEPVVTL 124 Query: 129 LNYVEKYSRNRMIQLDDTHKLVSTYGGNKNAHGYFLTLGAARKLSENLFPIWLVADRWER 188 L ++++Y + L H+ V AHGYF+T AA+++ E L+P+WL AD W + Sbjct: 125 LTHIDRYYKRSARPLTADHRTVKLANYQWLAHGYFVTRAAAKRMVEQLYPVWLAADYWYK 184 Query: 189 FKEKKFIRLKALLPYCIGLTTLAQDSNLNTDR-VARMELYPRGGLMYYLHRYLYKKFIYQ 247 F+ + ++++A++PY IG+ SNL DR + E R GL ++L + +KF+YQ Sbjct: 185 FEREGIVQMRAVVPYVIGVQDFDSGSNLEADRAIKSREADDRLGLGHHLRQIFVRKFLYQ 244 Query: 248 LFVRPFLRV 256 +FVRPFL + Sbjct: 245 IFVRPFLGI 253 >ref|YP_002981955.1| glycosyl transferase family 25 [Ralstonia pickettii 12D] gb|ACS63283.1| glycosyl transferase family 25 [Ralstonia pickettii 12D] Length = 260 Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 104/249 (41%), Positives = 151/249 (60%), Gaps = 1/249 (0%) Query: 9 VHCFVINLATDVARRETISAQLDRLQIPHTIFPAVDGRLLSEEELSERYDRARAIEESHD 68 V F INL D RRE + QLD L +PH FP V G+ L +EL+ YD ARA +S + Sbjct: 5 VPTFFINLDHDAGRREALERQLDALGLPHRRFPGVYGKTLPADELARHYDHARATGQSRE 64 Query: 69 LTRGEIGCALSHHGVYCEMVRQGITHALVLEDDARLNDQVPGLLPRLAQMYPAEVSQVVM 128 LT GE+GCALSH GVY M+ Q + +AL+LEDDA+L VP +L LA+ + V + Sbjct: 65 LTVGEVGCALSHLGVYRAMIEQDLPYALILEDDAKLGPDVPAVLDALARSVSPDEPVVTL 124 Query: 129 LNYVEKYSRNRMIQLDDTHKLVSTYGGNKNAHGYFLTLGAARKLSENLFPIWLVADRWER 188 L ++++Y + L H+ V AHGYF+T AA+++ E L+P+WL AD W + Sbjct: 125 LTHIDRYYKRSARPLTANHRTVKLANYQWLAHGYFVTRAAAKRMVEQLYPVWLAADYWYK 184 Query: 189 FKEKKFIRLKALLPYCIGLTTLAQDSNLNTDR-VARMELYPRGGLMYYLHRYLYKKFIYQ 247 F+ + ++++A++PY IG+ SNL DR + E R GL ++L + +KF+YQ Sbjct: 185 FEREGIVQMRAVVPYVIGVQNFDSGSNLEADRAIKSREADTRLGLGHHLRQIFVRKFLYQ 244 Query: 248 LFVRPFLRV 256 +FVRPFL + Sbjct: 245 IFVRPFLGI 253 >ref|YP_004684694.1| glycosyltransferase involved in LPS biosynthesis [Cupriavidus necator N-1] gb|AEI76213.1| glycosyltransferase involved in LPS biosynthesis [Cupriavidus necator N-1] Length = 257 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 112/251 (44%), Positives = 159/251 (63%), Gaps = 3/251 (1%) Query: 9 VHCFVINLATDVARRETISAQLDRLQIPHTIFPAVDGRLLSEEELSERYDRARAIEESHD 68 + +VINL T RRE IS QL L IP +F AVDGR+L+EEE++ +YD A A Sbjct: 2 IGAYVINLDTARERRERISGQLAGLGIPFQVFRAVDGRVLAEEEVASKYDAAAAAARYRP 61 Query: 69 LTRGEIGCALSHHGVYCEMVRQGITHALVLEDDARLNDQVPGLLPRLAQMYPAEVSQVVM 128 ++RGE+GC LSH GVY +M+ G ALVLEDDA L + +L L + ++VV+ Sbjct: 62 MSRGEVGCGLSHLGVYRKMLDDGAAFALVLEDDASLGPDLASVLADLESRLDPDRAEVVL 121 Query: 129 LNYVEKYSRNRMIQLDDTHKLVSTYGGNKNAHGYFLTLGAARKLSENLFPIWLVADRWER 188 L++V+KY+R +L +LV YG AHGY +T AA++L L P+W AD W Sbjct: 122 LSHVDKYTRWGARRLGGERRLVRRYGEWWLAHGYVVTRAAAQRLLAGLQPLWCAADYWSA 181 Query: 189 FKEKKFIRLKALLPYCIGLTTLAQDSNLNTDRVARMELYPRG--GLMYYLHRYLYKKFIY 246 F+++ + + A++PYCIGLT LA+ S+L T R A ++ + + YYL RY+Y++F++ Sbjct: 182 FEKQGLVSVSAVVPYCIGLTELAETSSLETHR-ADLDATDKAQRSIGYYLRRYVYQRFLF 240 Query: 247 QLFVRPFLRVA 257 QL VRPFLRVA Sbjct: 241 QLIVRPFLRVA 251 >ref|YP_725417.1| glycosyltransferase involved in LPS biosynthesis [Ralstonia eutropha H16] emb|CAJ92049.1| glycosyltransferase involved in LPS biosynthesis [Ralstonia eutropha H16] Length = 257 Score = 196 bits (497), Expect = 7e-48, Method: Composition-based stats. Identities = 110/251 (43%), Positives = 158/251 (62%), Gaps = 3/251 (1%) Query: 9 VHCFVINLATDVARRETISAQLDRLQIPHTIFPAVDGRLLSEEELSERYDRARAIEESHD 68 + +VINL + RRE IS QL L IP +F AVDGR+L+E+E++ +YD A A Sbjct: 2 IGAYVINLDSARERRERISGQLAGLGIPFQVFRAVDGRVLAEQEVASKYDAAAAAARYRP 61 Query: 69 LTRGEIGCALSHHGVYCEMVRQGITHALVLEDDARLNDQVPGLLPRLAQMYPAEVSQVVM 128 ++RGE+GC LSH GVY +M+ G ALVLEDDA + +L L + ++VV+ Sbjct: 62 MSRGEVGCGLSHLGVYRKMLDDGAAFALVLEDDASPGPDLATVLADLESRLDPDRAEVVL 121 Query: 129 LNYVEKYSRNRMIQLDDTHKLVSTYGGNKNAHGYFLTLGAARKLSENLFPIWLVADRWER 188 L++V+KY+R +L +LV YG AHGY +T AAR+L L P+W AD W Sbjct: 122 LSHVDKYTRWGARRLGGERRLVRRYGEWWRAHGYVVTRAAARRLLAGLQPMWCAADYWSA 181 Query: 189 FKEKKFIRLKALLPYCIGLTTLAQDSNLNTDRVARMELYPRG--GLMYYLHRYLYKKFIY 246 F+++ + + A++PYCIGLT LA+ S+L T R A ++ + + YYL RY+Y++F++ Sbjct: 182 FEKQGLVSVSAVVPYCIGLTELAETSSLETHR-ADLDATDKAQRSIGYYLRRYVYQRFLF 240 Query: 247 QLFVRPFLRVA 257 QL VRPFLRVA Sbjct: 241 QLIVRPFLRVA 251