BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4440.p (338 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004751700.1| lipopolysaccharide 3-alpha-galactosyltransfe... 300 2e-79 ref|YP_296763.1| glycosyl transferase family protein [Ralstonia ... 276 3e-72 ref|YP_003776955.1| UDP-glucose:(glucosyl) LPS alpha 1,3-glucosy... 274 2e-71 ref|YP_003776956.1| UDP-glucose:(glucosyl) LPS alpha 1,3-glucosy... 238 2e-60 ref|YP_002801568.1| lipopolysaccharide 1,3-galactosyltransferase... 231 1e-58 >ref|YP_004751700.1| lipopolysaccharide 3-alpha-galactosyltransferase [Collimonas fungivorans Ter331] gb|AEK60877.1| Lipopolysaccharide 3-alpha-galactosyltransferase [Collimonas fungivorans Ter331] Length = 321 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 157/318 (49%), Positives = 203/318 (63%), Gaps = 3/318 (0%) Query: 13 PVSPAQSGDTPFHIAFGIDGRYFRYAGVTITSILENNRDQAFVFHVLAPDVPEAVRQKYQ 72 P SPA + D+ FHIAF +D Y R G TI SI+ N+ F FHV A + E R++++ Sbjct: 6 PTSPATADDS-FHIAFCVDDHYCRSMGATIASIIANSPGVTFTFHVFAFALSEDNRKRFK 64 Query: 73 ALEQRYGTQIVFHLIDEDRFAEYYQFSRHSQYSPAVFTRLLIPEVLKDTAREVLYLDADI 132 LEQ Y + H+ID + F + S+ S YSP +FTRLLIP L+ +VLYLDADI Sbjct: 65 QLEQMYQLKTHVHIIDPEVFKPFAHISQFSYYSPTIFTRLLIPSTLRGMCDKVLYLDADI 124 Query: 133 LCTGSIAGLRALDLRDDVVAVVSDHLETTVRNRCAALQLPADQYFNSGVLYINVANWIAN 192 LC GS+A LR +D D VV D ETT R RCAALQL + +YFNSGV+Y++V NW+ Sbjct: 125 LCVGSMAELRDMDFGDSAAIVVPDADETT-RRRCAALQLSSQKYFNSGVMYMHVENWMTQ 183 Query: 193 DITAQVMQAIVQHGQKLVFPDQDALNIVLAGRARYIEPCWNFRYNLEFMLNGGQFDTWLP 252 +IT + + AI+++G++ FPDQDALN+VL G+ RYI+ WNF Y+L L + Sbjct: 184 EITEKTILAILENGKEYRFPDQDALNVVLEGKIRYIDRKWNFLYDLIHDLEKDKRQMRDI 243 Query: 253 GPAVFLHFTGRVKPWHAWNLHPSRELFSKYLALSPWAGTPLD-APRHYKEMRMYAGFLRK 311 G VF+HF G VKPW+ W LH S LF KY ALSPWA LD APR+YKEMRMY+ FL K Sbjct: 244 GAVVFIHFAGAVKPWNDWCLHASTALFVKYQALSPWADLALDPAPRNYKEMRMYSRFLMK 303 Query: 312 KKQWGGWLAWYATYLAHK 329 + Q WY YL+ + Sbjct: 304 RGQVLDSFRWYMKYLSAR 321 >ref|YP_296763.1| glycosyl transferase family protein [Ralstonia eutropha JMP134] gb|AAZ61919.1| Glycosyl transferase, family 8 [Ralstonia eutropha JMP134] Length = 331 Score = 276 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 146/323 (45%), Positives = 194/323 (60%), Gaps = 2/323 (0%) Query: 5 PMSTIDQMPVSPAQSGDTPFHIAFGIDGRYFRYAGVTITSILENNRDQAFVFHVLAPDVP 64 P S + M +G FHIAF +D YFR G TI SI++NN Q F FHVL Sbjct: 4 PASDNNTMAPMTGSNGKPSFHIAFCVDDNYFRAMGATIASIIDNNPGQHFTFHVLTFSAL 63 Query: 65 EAVRQKYQALEQRYGTQIVFHLIDEDRFAEYYQFSRHSQYSPAVFTRLLIPEVLKDTARE 124 E +++ + LE+ Y HL+D F ++ F HS YS ++FTRL+IPEVL+ Sbjct: 64 EENQRRLKQLEEMYPVSTQLHLLDLASFTQFSHFLGHSHYSLSIFTRLVIPEVLQGQTDR 123 Query: 125 VLYLDADILCTGSIAGLRALDLRDDVVAVVSDHLETTVRNRCAALQLPADQYFNSGVLYI 184 VLYLDADILC + L +D+ +++ VV D T+R R AAL L +YFN GVL+I Sbjct: 124 VLYLDADILCVNRLDELVDMDISNEIAVVVPD-APVTLRRRVAALGLAHAEYFNGGVLFI 182 Query: 185 NVANWIANDITAQVMQAIVQHGQKLVFPDQDALNIVLAGRARYIEPCWNFRYNLEFMLNG 244 N+ W+A +IT Q ++A++ + F DQDALN VL GRA+YI P WN+ Y+L LN Sbjct: 183 NIDKWLAENITPQTLEALLDTSTDMRFNDQDALNKVLNGRAKYISPRWNYLYDLIHDLNV 242 Query: 245 GQFDTWLPGPAVFLHFTGRVKPWHAWNLHPSRELFSKYLALSPWAGTPLDA-PRHYKEMR 303 +F G AVF+HF G VKPW W+ H +R LF KYLALSPW PLD PR+ KEMR Sbjct: 243 NRFAMRPVGKAVFIHFAGSVKPWADWSGHEARGLFRKYLALSPWRDMPLDPEPRNTKEMR 302 Query: 304 MYAGFLRKKKQWGGWLAWYATYL 326 M++ F+ ++ + L WY YL Sbjct: 303 MHSRFMFRQHKPVESLKWYLRYL 325 >ref|YP_003776955.1| UDP-glucose:(glucosyl) LPS alpha 1,3-glucosyltransferase WaaO protein [Herbaspirillum seropedicae SmR1] gb|ADJ65047.1| UDP-glucose:(glucosyl) LPS alpha 1,3-glucosyltransferase WaaO protein [Herbaspirillum seropedicae SmR1] Length = 328 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 142/323 (43%), Positives = 198/323 (61%), Gaps = 3/323 (0%) Query: 8 TIDQMPVSPAQSGDTPFHIAFGIDGRYFRYAGVTITSILENNRDQAFVFHVLAPDVPEAV 67 T +++ P +G FHIAF +D YFR G TI SI+ NN DQ F FHVLA +V E Sbjct: 5 TQEEIKAHPG-NGKPSFHIAFCVDNNYFRAMGGTIASIVANNPDQHFTFHVLAFEVSEDH 63 Query: 68 RQKYQALEQRYGTQIVFHLIDEDRFAEYYQFSRHSQYSPAVFTRLLIPEVLKDTAREVLY 127 +++ + LE Y + HL+D + F ++ F HS YS ++FTRL+IP VL + VLY Sbjct: 64 QRRLKQLEAMYRVKTELHLLDLNDFTQFSHFLGHSHYSLSIFTRLVIPTVLAEVTDRVLY 123 Query: 128 LDADILCTGSIAGLRALDLRDDVVAVVSDHLETTVRNRCAALQLPADQYFNSGVLYINVA 187 LDADILC + L +D+ D+ VV D T++ R AAL+L +YFN GV++IN+ Sbjct: 124 LDADILCFNRLDALVDMDISQDIAVVVPD-APVTLQRRVAALELAHKEYFNGGVIFINIP 182 Query: 188 NWIANDITAQVMQAIVQHGQKLVFPDQDALNIVLAGRARYIEPCWNFRYNLEFMLNGGQF 247 W+A DIT + + A++ + F DQDALNIVL GRARY+ P WN+ Y+L LN +F Sbjct: 183 KWLAEDITPKTLDALLNSKTDMRFNDQDALNIVLNGRARYVSPKWNYLYDLIHDLNVNKF 242 Query: 248 DTWLPGPAVFLHFTGRVKPWHAWNLHPSRELFSKYLALSPWAGTPLDA-PRHYKEMRMYA 306 G A+F+HF G VKPW AW+ H + LF +YL +SPWA LD PR+ KE+RM++ Sbjct: 243 ALKPVGKAIFVHFAGAVKPWAAWSRHEACTLFRRYLDISPWADMALDQEPRNTKELRMHS 302 Query: 307 GFLRKKKQWGGWLAWYATYLAHK 329 F+ ++ + L WY YL + Sbjct: 303 RFMYRQGRPLESLKWYLRYLGKR 325 >ref|YP_003776956.1| UDP-glucose:(glucosyl) LPS alpha 1,3-glucosyltransferase WaaO protein [Herbaspirillum seropedicae SmR1] gb|ADJ65048.1| UDP-glucose:(glucosyl) LPS alpha 1,3-glucosyltransferase WaaO protein [Herbaspirillum seropedicae SmR1] Length = 338 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 129/320 (40%), Positives = 186/320 (58%), Gaps = 4/320 (1%) Query: 11 QMPVSPAQSGDTPFHIAFGIDGRYFRYAGVTITSILENNRDQAFVFHVLAPDVPEAVRQK 70 Q P + D +HIAF +D YFR G + S++ NN + FVFHV A + + ++ Sbjct: 9 QNPAHSTTAADAAWHIAFCVDNHYFRAMGAMLASMVANNPGRRFVFHVFAFAISDDNARR 68 Query: 71 YQALEQRYGTQIVFHLIDEDRFAEYYQFSRHSQYSPAVFTRLLIPEVLKDTAREVLYLDA 130 +++E+ ++V HL+ ++ FAE+ + S YS + FTRL++P LKD VLY+DA Sbjct: 69 MRSIEENPNIKVVPHLVAQETFAEFGEMIAKSYYSLSTFTRLIVPATLKDQTDRVLYVDA 128 Query: 131 DILCTGSIAGLRALDLRDDVVAVVSD---HLETTVRNRCAALQLPADQYFNSGVLYINVA 187 D+LC GS+ L +DL VV D T R + L L +YFN+G+LYIN+ Sbjct: 129 DMLCVGSLEELMGMDLDGTNALVVDDVGWEAPTGRDGRYSVLGLKHPRYFNAGMLYINIP 188 Query: 188 NWIANDITAQVMQAIVQHGQKLVFPDQDALNIVLAGRARYIEPCWNFRYNLEFMLNGGQF 247 W N ++ ++A+V + KL F DQDALNIVL G+ARYI WN+ Y++ L G+ Sbjct: 189 EWEKNKVSEAAIRALVSNPDKLTFNDQDALNIVLDGQARYIPVKWNYIYSMIADLKQGRQ 248 Query: 248 DTWLPGPAVFLHFTGRVKPWHAWNLHPSRELFSKYLALSPWAGTPLD-APRHYKEMRMYA 306 G A +HF G VKPW W+ H +REL+ +Y LS W+ PLD AP ++KEMR+YA Sbjct: 249 TMSPVGDARIIHFAGLVKPWIDWSGHAARELYLRYHTLSAWSDLPLDAAPLNHKEMRVYA 308 Query: 307 GFLRKKKQWGGWLAWYATYL 326 FL K+ + L W A +L Sbjct: 309 RFLIKRGDYACGLYWNARFL 328 >ref|YP_002801568.1| lipopolysaccharide 1,3-galactosyltransferase [Azotobacter vinelandii DJ] gb|ACO80593.1| Lipopolysaccharide 1,3-galactosyltransferase [Azotobacter vinelandii DJ] Length = 326 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 127/311 (40%), Positives = 170/311 (54%), Gaps = 5/311 (1%) Query: 24 FHIAFGIDGRYFRYAGVTITSILENNRDQAFVFHVLAPDVPEAVRQKYQALEQRYGTQIV 83 HIAFG+D Y R G+TI SI+ENN VFHV + A R + LE+ + + Sbjct: 12 LHIAFGVDENYLRPMGITIVSIIENNPGLELVFHVFISSISSASRVRLDRLERMFARPVN 71 Query: 84 FHLIDED-RFAEYYQFSRHSQYSPAVFTRLLIPEVLKDTAREVLYLDADILCTGSIAGLR 142 HL+DE + + S A + RLLIPE L+D VLYLDADILC G I+GL Sbjct: 72 LHLVDEMLDVKDPASGKGQAHISKAAYIRLLIPEALRDFTDRVLYLDADILCVGDISGLL 131 Query: 143 ALDLRDDVVAVVSDHLETTVRNRCAALQLPADQYFNSGVLYINVANWIANDITAQVMQAI 202 LD+ AV+ D + R D YFNSGVLYI++ WI +T++ ++ I Sbjct: 132 HLDIDGRTAAVIRDAGAESKRAGLVKKGQTLDNYFNSGVLYIDIPRWIERAVTSRALEKI 191 Query: 203 VQHGQKLVFPDQDALNIVLAGRARYIEPCWNFRYNLEFMLNGGQFDTWLPGPAVFLHFTG 262 L + DQDALN+VL G R+I+ WN +Y L L G+ +P F+HF G Sbjct: 192 ADPVLDLRYSDQDALNLVLDGDVRFIDKGWNHQYGLTGKLKKGRVGMDVPSDTKFVHFIG 251 Query: 263 RVKPWHAWNLHPSRELFSKYLALSPWAGTPLDAPRHYKEMRMYAGFL-RKKKQWGGWLA- 320 +KPW +WN H S+ELF +Y ALSPWAG LD +E+ +Y+ F+ R Q G WL+ Sbjct: 252 PMKPWRSWNPHQSKELFLRYQALSPWAGEALDDNFSPREIYVYSRFMYRSMFQQGRWLSG 311 Query: 321 --WYATYLAHK 329 WY +L K Sbjct: 312 LIWYGKFLHRK 322