BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4439.p (377 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_296762.1| glycosyl transferase family protein [Ralstonia ... 467 e-129 ref|YP_003776954.1| ADP-heptose:LPS heptosyltransferase [Herbasp... 447 e-123 ref|YP_004751698.1| glycosyl transferase family protein [Collimo... 387 e-105 ref|YP_001095822.1| glycosyl transferase family protein [Shewane... 177 3e-42 ref|YP_003554853.1| hypothetical protein SVI_0104 [Shewanella vi... 171 1e-40 >ref|YP_296762.1| glycosyl transferase family protein [Ralstonia eutropha JMP134] gb|AAZ61918.1| Glycosyl transferase, family 9 [Ralstonia eutropha JMP134] Length = 376 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 234/362 (64%), Positives = 285/362 (78%), Gaps = 1/362 (0%) Query: 2 PQTHIPPQLLQQSDKILIIAHLALGDFTYLQNFFQAFARANPHLKVHLWVDEVRRTSDPA 61 PQT IP LL++S KIL IAHLALGDFTYLQNFF+AFA+ANPHL++HLWVDEVRRT D Sbjct: 11 PQTLIPADLLKRSKKILFIAHLALGDFTYLQNFFKAFAQANPHLEIHLWVDEVRRTGDAK 70 Query: 62 QWKHLGKYSLYDWVAACPFFDKIYTRTYSPALYQESIEEAQREHYPIVVSLATLRPHLYA 121 W+HL KYSLYDW+AACPFF K+YTRTYSP LY+ SI EAQ+EHYPIVVSLATLRP YA Sbjct: 71 AWEHLRKYSLYDWLAACPFFSKVYTRTYSPELYEASIREAQQEHYPIVVSLATLRPPQYA 130 Query: 122 GLARSISPDGLVIGMKKRVKFYQPHHQLAYRKLNAAIPPYSVDRANPQHISDVYAHWFHQ 181 LAR+ISPDG V+GM + V+FYQPHH LAYRKL+A+IPPY VDRA+PQHISDVYAHWF Q Sbjct: 131 NLARTISPDGFVVGMTRPVRFYQPHHLLAYRKLDASIPPYKVDRASPQHISDVYAHWFRQ 190 Query: 182 LSGLEVGAGERFPFVDIPPQWHAWSSEQLQQWGVGPQQ-KLIFVNGFSKAPERSWSLDRI 240 +SGLEV ERFPFVDIP QW ++ + L WG P++ KL+F+N ++K +R W+L+++ Sbjct: 191 ISGLEVSPAERFPFVDIPAQWQQYAQDTLAAWGFLPREGKLVFINPYAKTKKRCWTLEQV 250 Query: 241 LDLARRLQSRPGWEEVHFVVNVVPEALADAERRLAAVQSPRLHLFSADQNFFQLPAMLAR 300 L + +Q P W + F+VN VP+ LA A +++ R LFSA+ NFFQLPA+LA+ Sbjct: 251 AALIQAMQQHPRWRDSCFIVNAVPQELAHAREVISSYSLARTELFSAEDNFFQLPAILAQ 310 Query: 301 CQLVISVETAVMHLANAVHVPVLALMRRTSPEWTPIDQANSTVIWVATPKGGVEEITTEQ 360 C L+ISVETAVMHLANAVHVPV+ALMR+ +PEW PID+ NSTVI A + V I EQ Sbjct: 311 CDLIISVETAVMHLANAVHVPVIALMRQKNPEWVPIDRQNSTVITAANRRDWVNAIPVEQ 370 Query: 361 VI 362 V+ Sbjct: 371 VM 372 >ref|YP_003776954.1| ADP-heptose:LPS heptosyltransferase [Herbaspirillum seropedicae SmR1] gb|ADJ65046.1| ADP-heptose:LPS heptosyltransferase protein [Herbaspirillum seropedicae SmR1] Length = 367 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 228/360 (63%), Positives = 277/360 (76%), Gaps = 2/360 (0%) Query: 4 THIPPQLLQQSDKILIIAHLALGDFTYLQNFFQAFARANPHLKVHLWVDEVRRTSDPAQW 63 T IP LL++SDKIL IAHLALGDFTYLQNFF+AFA +PHLKVHLWVDEVRRT+D +QW Sbjct: 6 TLIPADLLKKSDKILFIAHLALGDFTYLQNFFKAFAAQHPHLKVHLWVDEVRRTADSSQW 65 Query: 64 KHLGKYSLYDWVAACPFFDKIYTRTYSPALYQESIEEAQREHYPIVVSLATLRPHLYAGL 123 HL KY+LYDW AACPFF K+YTRTYSPALY++SIEEA+ EHYPIVVSLATLRPHLYAGL Sbjct: 66 PHLQKYALYDWTAACPFFAKVYTRTYSPALYRDSIEEARAEHYPIVVSLATLRPHLYAGL 125 Query: 124 ARSISPDGLVIGMKKRVKFYQPHHQLAYRKLNAAIPPYSVDRANPQHISDVYAHWFHQLS 183 AR ISP+G V+GMKK+V QPHH LAYRKL+A +PPY + HISDVYAHWF QLS Sbjct: 126 AREISPEGWVVGMKKKVSLLQPHHLLAYRKLDAVMPPYRSSQPE-HHISDVYAHWFRQLS 184 Query: 184 GLEVGAGERFPFVDIPPQWHAWSSEQLQQWGVGPQQ-KLIFVNGFSKAPERSWSLDRILD 242 GLEV RFPFVDIPPQW ++ +QL W P+ KL+F+N ++K +R W L+ + D Sbjct: 185 GLEVTGQARFPFVDIPPQWRQYAQDQLAAWQFAPRTGKLVFINPYAKTRKRCWPLEHVAD 244 Query: 243 LARRLQSRPGWEEVHFVVNVVPEALADAERRLAAVQSPRLHLFSADQNFFQLPAMLARCQ 302 L + +Q R GW++ +VN VP+ LA A + LFSA++NFFQLPAMLA C Sbjct: 245 LIQAMQQREGWQDARVIVNAVPQELAHAREVIGRYGLQGTELFSAEENFFQLPAMLAACD 304 Query: 303 LVISVETAVMHLANAVHVPVLALMRRTSPEWTPIDQANSTVIWVATPKGGVEEITTEQVI 362 L+ISVETAVMHLANAVHVPV+ALMR+ +PEW P+D+A+STVI + V+ ++ EQV+ Sbjct: 305 LIISVETAVMHLANAVHVPVIALMRQKNPEWVPVDRAHSTVITAPGRRDWVKAVSVEQVM 364 >ref|YP_004751698.1| glycosyl transferase family protein [Collimonas fungivorans Ter331] gb|AEK60875.1| glycosyl transferase, family 9 [Collimonas fungivorans Ter331] Length = 396 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 202/369 (54%), Positives = 259/369 (70%), Gaps = 8/369 (2%) Query: 1 MPQTHIPPQLLQQSDKILIIAHLALGDFTYLQNFFQAFARANPHLKVHLWVDEVRRTSDP 60 M +P ++L+++DKIL IAHLALGDFTYLQN FQAFA+A PH+K+H+WVDEVRRT + Sbjct: 23 MTAQLVPAEILKKTDKILFIAHLALGDFTYLQNCFQAFAQAYPHIKIHIWVDEVRRTKNT 82 Query: 61 AQWKHLGKYSLYDWVAACPFFDKIYTRTYSPALYQESIEEAQREHYPIVVSLATLRPHLY 120 A W L KY+LYDW+A CPF KIY +TYSPAL++ESI EAQ++ YP+VVSL+TLRP +Y Sbjct: 83 AAWPFLKKYALYDWLAECPFVAKIYRQTYSPALFEESIVEAQKQQYPLVVSLSTLRPPMY 142 Query: 121 AGLARSISPDGLVIGMKKRVKFYQPHHQLAYRKLNAAIPPYSVDRANPQHISDVYAHWFH 180 A LAR ISP G V GMKK H +LAYRKL+AA P V + HIS+VYA WFH Sbjct: 143 ATLARQISPQGFVAGMKKPAGILALHKRLAYRKLDAAFDPDRVAQRG-VHISEVYAAWFH 201 Query: 181 QLSGLEVGAGERFPFVDIPPQWHAWSSEQLQQWGVGPQQ-------KLIFVNGFSKAPER 233 +L G++ A R PFV IP QW ++ EQL+ WG + KL+F+N ++K +R Sbjct: 202 RLFGMDSAATSRQPFVRIPDQWSRYAQEQLKLWGFERDRRQSANPAKLVFINPYAKTRKR 261 Query: 234 SWSLDRILDLARRLQSRPGWEEVHFVVNVVPEALADAERRLAAVQSPRLHLFSADQNFFQ 293 W L+R+++L ++++ W++ F+VNVVPE +A A RL LFSA +NFFQ Sbjct: 262 CWPLERVVELVAAIRAQDSWKDTRFIVNVVPEEMAQARTFFDGHAVERLQLFSAQENFFQ 321 Query: 294 LPAMLARCQLVISVETAVMHLANAVHVPVLALMRRTSPEWTPIDQANSTVIWVATPKGGV 353 LPAML C L+ISVETAVMHLANAV VPV+ALMR+ +PEW PID+ NS VI A + V Sbjct: 322 LPAMLRECDLIISVETAVMHLANAVQVPVIALMRQKNPEWAPIDKENSIVITTANRRDWV 381 Query: 354 EEITTEQVI 362 + IT QVI Sbjct: 382 KAITVAQVI 390 >ref|YP_001095822.1| glycosyl transferase family protein [Shewanella loihica PV-4] gb|ABO25563.1| glycosyl transferase, family 9 [Shewanella loihica PV-4] Length = 390 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 110/368 (29%), Positives = 187/368 (50%), Gaps = 14/368 (3%) Query: 6 IPPQLLQQSDKILIIAHLALGDFTYLQNFFQAFARANPHLKVHLWVDEVRRTSDPAQWKH 65 IP + L Q+ ++L ++ LALGDF Y++ F A + +P L+V +W+D+ R D W+ Sbjct: 4 IPSERLAQARRLLFVSPLALGDFLYIKTFLAALKQQHPALEVDIWLDDNRNNQD--SWRL 61 Query: 66 LGKYSLYDWVAACPFFDKIYTRTYSPALYQESIEEAQREHYPIVVSLATLRPHLYAGLAR 125 + W+AA P F + Y + S A+ +E A+ Y +V++ + + ++ LAR Sbjct: 62 SRSKIMQQWIAAEPAFSRSYGCSDSKAMQDRQVEAAKALDYDLVITHSGSKSEQFSALAR 121 Query: 126 SISPDGLVIGMKKRVKFYQPHHQLAYRKLNAAIPPYSVDRANPQHISDVYAHWFHQLSGL 185 ISP G ++ + KF +R + HI+D Y H+++GL Sbjct: 122 RISPKGFIVTSLAKSKFGGLLDPWFFRHSDKTFKIDVAALGEQHHITDRYYQLLHRVAGL 181 Query: 186 EVGAGERFPFVDIPPQ----WHAWSSEQLQQWGVGPQQKLIFVNGFSKAPERSWSLDRIL 241 + P + I P+ AW S+ Q +L F+N S +R W ++ Sbjct: 182 TLDKSAFMPSLTITPEVTETAKAWLSKTFHGQS---QGRLYFLNHLSTNKKRDWHQSQLF 238 Query: 242 DLARRLQSRPGWEEVHFVVNVVPEALADAERRLA---AVQSPRLHLFSADQNFFQLPAML 298 +L RL + + F+VN PE + E+ +A + + ++ F+ NFF+LPAM+ Sbjct: 239 ELIARLTEQA--PDSRFIVNSTPENFSALEQAIADEPKLANSQVAAFTVQDNFFELPAMI 296 Query: 299 ARCQLVISVETAVMHLANAVHVPVLALMRRTSPEWTPIDQANSTVIWVATPKGGVEEITT 358 A +VI+VETA+MH A A P++A+MR+ P W P + +S V++ +T KG V +I Sbjct: 297 AAADMVITVETAIMHFATASQRPLIAMMRQKKPYWAPPETTSSKVLYASTGKGYVCDIGV 356 Query: 359 EQVIDHLA 366 ++V+ LA Sbjct: 357 DEVLATLA 364 >ref|YP_003554853.1| hypothetical protein SVI_0104 [Shewanella violacea DSS12] dbj|BAJ00075.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 392 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 100/360 (27%), Positives = 185/360 (51%), Gaps = 13/360 (3%) Query: 11 LQQSDKILIIAHLALGDFTYLQNFFQAFARANPHLKVHLWVDEVRRTSDPAQWKHLGKYS 70 L+ + ++L I+ +ALGDF YL+ F A + N H+++ +W+D+ R SD W+ Sbjct: 32 LESAKRLLFISPVALGDFLYLKTFLIALKKQNSHIEIDIWLDDNRNNSDA--WRLSRSKI 89 Query: 71 LYDWVAACPFFDKIYTRTYSPALYQESIEEAQREHYPIVVSLATLRPHLYAGLARSISPD 130 + W+ A P F + Y S + I +AQ +Y ++++ + + ++ +AR I PD Sbjct: 90 MQQWIEAEPAFTRSYGCCSSEKQQRAQIFDAQAINYDLIITHSGSKSEQFSNVAREIGPD 149 Query: 131 GLVIGMKKRVKFYQPHHQLAYRKLNAAIPPYSVDRANPQHISDVYAHWFHQLSGLEVGAG 190 ++ + K++ +R + + HI+D Y +++ G+++ Sbjct: 150 AFIVSSIGKSKYFGLIDSFLFRHSDRLFKLEENNLPAKHHITDRYYQLLNRIVGIKLDKN 209 Query: 191 ERFPFVDIPPQ----WHAWSSEQLQQWGVGPQQKLIFVNGFSKAPERSWSLDRILDLARR 246 + P + IP + W Q G Q LIF+N S +R W ++ +L + Sbjct: 210 DFMPSLTIPNEIAIITQNWLKTQFTD--SGRQGPLIFLNHLSTNSKRDWQESQLFELIKL 267 Query: 247 LQSRPGWEEVHFVVNVVPE---ALADAERRLAAVQSPRLHLFSADQNFFQLPAMLARCQL 303 + ++ + FVVNV E ++DA + + S ++ +F+ +++FF+LP+M+A L Sbjct: 268 IGNKS--PDSRFVVNVTKENYKKVSDAIKNNINLASLQVSVFTVNEHFFELPSMIASADL 325 Query: 304 VISVETAVMHLANAVHVPVLALMRRTSPEWTPIDQANSTVIWVATPKGGVEEITTEQVID 363 VI+VETA+MH A A + P++A+MR+ P W P S V++ + KG V +I+ QV+D Sbjct: 326 VITVETAIMHFATASNRPLIAMMRQKKPYWAPPSSQTSRVLYASKGKGYVSDISVNQVLD 385