BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4438.p (322 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776955.1| UDP-glucose:(glucosyl) LPS alpha 1,3-glucosy... 402 e-110 ref|YP_296763.1| glycosyl transferase family protein [Ralstonia ... 398 e-109 ref|YP_004751700.1| lipopolysaccharide 3-alpha-galactosyltransfe... 337 2e-90 ref|YP_003776956.1| UDP-glucose:(glucosyl) LPS alpha 1,3-glucosy... 333 2e-89 ref|YP_002801568.1| lipopolysaccharide 1,3-galactosyltransferase... 230 2e-58 >ref|YP_003776955.1| UDP-glucose:(glucosyl) LPS alpha 1,3-glucosyltransferase WaaO protein [Herbaspirillum seropedicae SmR1] gb|ADJ65047.1| UDP-glucose:(glucosyl) LPS alpha 1,3-glucosyltransferase WaaO protein [Herbaspirillum seropedicae SmR1] Length = 328 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 186/319 (58%), Positives = 237/319 (74%) Query: 3 QSEHADAGPSFHIAFCVDNNYFRAMGATIASIIANNPQRRFTFHVLTFAASEQHRQRLQE 62 ++ + PSFHIAFCVDNNYFRAMG TIASI+ANNP + FTFHVL F SE H++RL++ Sbjct: 10 KAHPGNGKPSFHIAFCVDNNYFRAMGGTIASIVANNPDQHFTFHVLAFEVSEDHQRRLKQ 69 Query: 63 LEQNPLVQTRLHLLETSDFAQFEHFLKSSYYSLSIFTRLVIPTVLQDVTDRVLYLDADML 122 LE V+T LHLL+ +DF QF HFL S+YSLSIFTRLVIPTVL +VTDRVLYLDAD+L Sbjct: 70 LEAMYRVKTELHLLDLNDFTQFSHFLGHSHYSLSIFTRLVIPTVLAEVTDRVLYLDADIL 129 Query: 123 CVGSLDGLAQLDMQDDIVAVAPDHPATTEKRCAALQLADPRYFNSGMLYINIPRWQEAKI 182 C LD L +D+ DI V PD P T ++R AAL+LA YFN G+++INIP+W I Sbjct: 130 CFNRLDALVDMDISQDIAVVVPDAPVTLQRRVAALELAHKEYFNGGVIFINIPKWLAEDI 189 Query: 183 TEQVMQVLLDNTQTLRFIDQDVLNIVLNGRARYISRNYNYLYDMVHDLKSNETRMRPVGK 242 T + + LL++ +RF DQD LNIVLNGRARY+S +NYLYD++HDL N+ ++PVGK Sbjct: 190 TPKTLDALLNSKTDMRFNDQDALNIVLNGRARYVSPKWNYLYDLIHDLNVNKFALKPVGK 249 Query: 243 AVIIHFAGPIKPWSAWTGHEATRLFAQYHQLSPWRQMPADEAPTNSTERRMHSRFLYRQG 302 A+ +HFAG +KPW+AW+ HEA LF +Y +SPW M D+ P N+ E RMHSRF+YRQG Sbjct: 250 AIFVHFAGAVKPWAAWSRHEACTLFRRYLDISPWADMALDQEPRNTKELRMHSRFMYRQG 309 Query: 303 KYLQSLVWFVRYLRKHSRK 321 + L+SL W++RYL K + K Sbjct: 310 RPLESLKWYLRYLGKRAAK 328 >ref|YP_296763.1| glycosyl transferase family protein [Ralstonia eutropha JMP134] gb|AAZ61919.1| Glycosyl transferase, family 8 [Ralstonia eutropha JMP134] Length = 331 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 191/321 (59%), Positives = 239/321 (74%) Query: 1 MSQSEHADAGPSFHIAFCVDNNYFRAMGATIASIIANNPQRRFTFHVLTFAASEQHRQRL 60 M+ ++ PSFHIAFCVD+NYFRAMGATIASII NNP + FTFHVLTF+A E++++RL Sbjct: 11 MAPMTGSNGKPSFHIAFCVDDNYFRAMGATIASIIDNNPGQHFTFHVLTFSALEENQRRL 70 Query: 61 QELEQNPLVQTRLHLLETSDFAQFEHFLKSSYYSLSIFTRLVIPTVLQDVTDRVLYLDAD 120 ++LE+ V T+LHLL+ + F QF HFL S+YSLSIFTRLVIP VLQ TDRVLYLDAD Sbjct: 71 KQLEEMYPVSTQLHLLDLASFTQFSHFLGHSHYSLSIFTRLVIPEVLQGQTDRVLYLDAD 130 Query: 121 MLCVGSLDGLAQLDMQDDIVAVAPDHPATTEKRCAALQLADPRYFNSGMLYINIPRWQEA 180 +LCV LD L +D+ ++I V PD P T +R AAL LA YFN G+L+INI +W Sbjct: 131 ILCVNRLDELVDMDISNEIAVVVPDAPVTLRRRVAALGLAHAEYFNGGVLFINIDKWLAE 190 Query: 181 KITEQVMQVLLDNTQTLRFIDQDVLNIVLNGRARYISRNYNYLYDMVHDLKSNETRMRPV 240 IT Q ++ LLD + +RF DQD LN VLNGRA+YIS +NYLYD++HDL N MRPV Sbjct: 191 NITPQTLEALLDTSTDMRFNDQDALNKVLNGRAKYISPRWNYLYDLIHDLNVNRFAMRPV 250 Query: 241 GKAVIIHFAGPIKPWSAWTGHEATRLFAQYHQLSPWRQMPADEAPTNSTERRMHSRFLYR 300 GKAV IHFAG +KPW+ W+GHEA LF +Y LSPWR MP D P N+ E RMHSRF++R Sbjct: 251 GKAVFIHFAGSVKPWADWSGHEARGLFRKYLALSPWRDMPLDPEPRNTKEMRMHSRFMFR 310 Query: 301 QGKYLQSLVWFVRYLRKHSRK 321 Q K ++SL W++RYLRK +++ Sbjct: 311 QHKPVESLKWYLRYLRKRAQR 331 >ref|YP_004751700.1| lipopolysaccharide 3-alpha-galactosyltransferase [Collimonas fungivorans Ter331] gb|AEK60877.1| Lipopolysaccharide 3-alpha-galactosyltransferase [Collimonas fungivorans Ter331] Length = 321 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 157/314 (50%), Positives = 219/314 (69%) Query: 2 SQSEHADAGPSFHIAFCVDNNYFRAMGATIASIIANNPQRRFTFHVLTFAASEQHRQRLQ 61 S + A A SFHIAFCVD++Y R+MGATIASIIAN+P FTFHV FA SE +R+R + Sbjct: 5 SPTSPATADDSFHIAFCVDDHYCRSMGATIASIIANSPGVTFTFHVFAFALSEDNRKRFK 64 Query: 62 ELEQNPLVQTRLHLLETSDFAQFEHFLKSSYYSLSIFTRLVIPTVLQDVTDRVLYLDADM 121 +LEQ ++T +H+++ F F H + SYYS +IFTRL+IP+ L+ + D+VLYLDAD+ Sbjct: 65 QLEQMYQLKTHVHIIDPEVFKPFAHISQFSYYSPTIFTRLLIPSTLRGMCDKVLYLDADI 124 Query: 122 LCVGSLDGLAQLDMQDDIVAVAPDHPATTEKRCAALQLADPRYFNSGMLYINIPRWQEAK 181 LCVGS+ L +D D V PD TT +RCAALQL+ +YFNSG++Y+++ W + Sbjct: 125 LCVGSMAELRDMDFGDSAAIVVPDADETTRRRCAALQLSSQKYFNSGVMYMHVENWMTQE 184 Query: 182 ITEQVMQVLLDNTQTLRFIDQDVLNIVLNGRARYISRNYNYLYDMVHDLKSNETRMRPVG 241 ITE+ + +L+N + RF DQD LN+VL G+ RYI R +N+LYD++HDL+ ++ +MR +G Sbjct: 185 ITEKTILAILENGKEYRFPDQDALNVVLEGKIRYIDRKWNFLYDLIHDLEKDKRQMRDIG 244 Query: 242 KAVIIHFAGPIKPWSAWTGHEATRLFAQYHQLSPWRQMPADEAPTNSTERRMHSRFLYRQ 301 V IHFAG +KPW+ W H +T LF +Y LSPW + D AP N E RM+SRFL ++ Sbjct: 245 AVVFIHFAGAVKPWNDWCLHASTALFVKYQALSPWADLALDPAPRNYKEMRMYSRFLMKR 304 Query: 302 GKYLQSLVWFVRYL 315 G+ L S W+++YL Sbjct: 305 GQVLDSFRWYMKYL 318 >ref|YP_003776956.1| UDP-glucose:(glucosyl) LPS alpha 1,3-glucosyltransferase WaaO protein [Herbaspirillum seropedicae SmR1] gb|ADJ65048.1| UDP-glucose:(glucosyl) LPS alpha 1,3-glucosyltransferase WaaO protein [Herbaspirillum seropedicae SmR1] Length = 338 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 158/318 (49%), Positives = 211/318 (66%), Gaps = 4/318 (1%) Query: 9 AGPSFHIAFCVDNNYFRAMGATIASIIANNPQRRFTFHVLTFAASEQHRQRLQELEQNPL 68 A ++HIAFCVDN+YFRAMGA +AS++ANNP RRF FHV FA S+ + +R++ +E+NP Sbjct: 18 ADAAWHIAFCVDNHYFRAMGAMLASMVANNPGRRFVFHVFAFAISDDNARRMRSIEENPN 77 Query: 69 VQTRLHLLETSDFAQFEHFLKSSYYSLSIFTRLVIPTVLQDVTDRVLYLDADMLCVGSLD 128 ++ HL+ FA+F + SYYSLS FTRL++P L+D TDRVLY+DADMLCVGSL+ Sbjct: 78 IKVVPHLVAQETFAEFGEMIAKSYYSLSTFTRLIVPATLKDQTDRVLYVDADMLCVGSLE 137 Query: 129 GLAQLDMQDDIVAVAPD----HPATTEKRCAALQLADPRYFNSGMLYINIPRWQEAKITE 184 L +D+ V D P + R + L L PRYFN+GMLYINIP W++ K++E Sbjct: 138 ELMGMDLDGTNALVVDDVGWEAPTGRDGRYSVLGLKHPRYFNAGMLYINIPEWEKNKVSE 197 Query: 185 QVMQVLLDNTQTLRFIDQDVLNIVLNGRARYISRNYNYLYDMVHDLKSNETRMRPVGKAV 244 ++ L+ N L F DQD LNIVL+G+ARYI +NY+Y M+ DLK M PVG A Sbjct: 198 AAIRALVSNPDKLTFNDQDALNIVLDGQARYIPVKWNYIYSMIADLKQGRQTMSPVGDAR 257 Query: 245 IIHFAGPIKPWSAWTGHEATRLFAQYHQLSPWRQMPADEAPTNSTERRMHSRFLYRQGKY 304 IIHFAG +KPW W+GH A L+ +YH LS W +P D AP N E R+++RFL ++G Y Sbjct: 258 IIHFAGLVKPWIDWSGHAARELYLRYHTLSAWSDLPLDAAPLNHKEMRVYARFLIKRGDY 317 Query: 305 LQSLVWFVRYLRKHSRKR 322 L W R+L R++ Sbjct: 318 ACGLYWNARFLLTALRRK 335 >ref|YP_002801568.1| lipopolysaccharide 1,3-galactosyltransferase [Azotobacter vinelandii DJ] gb|ACO80593.1| Lipopolysaccharide 1,3-galactosyltransferase [Azotobacter vinelandii DJ] Length = 326 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 132/318 (41%), Positives = 177/318 (55%), Gaps = 18/318 (5%) Query: 13 FHIAFCVDNNYFRAMGATIASIIANNPQRRFTFHVLTFAASEQHRQRLQELEQNPLVQTR 72 HIAF VD NY R MG TI SII NNP FHV + S R RL LE+ Sbjct: 12 LHIAFGVDENYLRPMGITIVSIIENNPGLELVFHVFISSISSASRVRLDRLERMFARPVN 71 Query: 73 LHLL-ETSDFAQFEHFLKSSYYSLSIFTRLVIPTVLQDVTDRVLYLDADMLCVGSLDGLA 131 LHL+ E D ++ S + + RL+IP L+D TDRVLYLDAD+LCVG + GL Sbjct: 72 LHLVDEMLDVKDPASGKGQAHISKAAYIRLLIPEALRDFTDRVLYLDADILCVGDISGLL 131 Query: 132 QLDMQDDIVAVAPDHPATTEKRCAAL----QLADPRYFNSGMLYINIPRWQEAKITEQVM 187 LD+ AV D A E + A L Q D YFNSG+LYI+IPRW E +T + + Sbjct: 132 HLDIDGRTAAVIRD--AGAESKRAGLVKKGQTLD-NYFNSGVLYIDIPRWIERAVTSRAL 188 Query: 188 QVLLDNTQTLRFIDQDVLNIVLNGRARYISRNYNYLYDMVHDLKSNETRMRPVGKAVIIH 247 + + D LR+ DQD LN+VL+G R+I + +N+ Y + LK M +H Sbjct: 189 EKIADPVLDLRYSDQDALNLVLDGDVRFIDKGWNHQYGLTGKLKKGRVGMDVPSDTKFVH 248 Query: 248 FAGPIKPWSAWTGHEATRLFAQYHQLSPWRQMPADEAPTNSTERRM--HSRFLYR----Q 301 F GP+KPW +W H++ LF +Y LSPW D+ N + R + +SRF+YR Q Sbjct: 249 FIGPMKPWRSWNPHQSKELFLRYQALSPWAGEALDD---NFSPREIYVYSRFMYRSMFQQ 305 Query: 302 GKYLQSLVWFVRYL-RKH 318 G++L L+W+ ++L RKH Sbjct: 306 GRWLSGLIWYGKFLHRKH 323