BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4436.p (576 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776953.1| multidrug ABC transporter ATPase/permease [H... 917 0.0 ref|ZP_08273879.1| Lipid A export ATP-binding/permease protein M... 760 0.0 ref|YP_001352225.1| ABC-type multidrug transport system, ATPase ... 759 0.0 ref|YP_001098803.1| lipid ABC transporter membrane/ATP-binding p... 756 0.0 ref|YP_004751697.1| lipid A export ATP-binding/permease [Collimo... 752 0.0 >ref|YP_003776953.1| multidrug ABC transporter ATPase/permease [Herbaspirillum seropedicae SmR1] gb|ADJ65045.1| ABC-type multidrug transport system, ATPase and permease components protein [Herbaspirillum seropedicae SmR1] Length = 578 Score = 917 bits (2371), Expect = 0.0, Method: Composition-based stats. Identities = 508/576 (88%), Positives = 546/576 (94%) Query: 1 MLSNNIKRLAALHWPYKKRLALAFLGMIVTAATEPVVPYIFQVLLDKGFVGKPTFSLWLV 60 MLSNN+KRLAALHWPYKKRLA+AF+ MIVTAATEPVVPYIFQVLLDKGFVGKP FSLWLV Sbjct: 1 MLSNNMKRLAALHWPYKKRLAVAFIAMIVTAATEPVVPYIFQVLLDKGFVGKPAFSLWLV 60 Query: 61 PAAVIGIFLIRGMATFTSTYMMTWVSTRILNELRRQMFARMLDLPIHFYATNTVGKVINS 120 P AVIGIF IRG+ATFTS+YMMTWVSTRILNELRRQMFARMLDLP+HFYATNTVGKVINS Sbjct: 61 PVAVIGIFFIRGIATFTSSYMMTWVSTRILNELRRQMFARMLDLPLHFYATNTVGKVINS 120 Query: 121 MMFEVQQIIDMVTKVFTSILRSALTVLGLLGWLLYLNWTLTIVTLVLLPLVSIVVRATGK 180 MMFEVQQIIDMVTKVFTSILRSALTVLGLL WLLYLNW LTIVTLVLLPLV++VVR TGK Sbjct: 121 MMFEVQQIIDMVTKVFTSILRSALTVLGLLAWLLYLNWVLTIVTLVLLPLVTLVVRTTGK 180 Query: 181 RLKKLNRDSLAVNAELTQLIEETTRAQQVIKIFGGHEYEKKRFHDRAENLRRYTMRMTAA 240 RLKKLNRDSLAVNAE+TQ+IEETTRAQQVIKIFGG +YEK+RF+ RAENLR YTMRMTAA Sbjct: 181 RLKKLNRDSLAVNAEMTQVIEETTRAQQVIKIFGGQDYEKERFNRRAENLRSYTMRMTAA 240 Query: 241 FSSTVPITQLMTACAVAIVIVMALIQSGNGQITVGGFVSFITAMLMLLAPLKQLAEINGP 300 FSSTVPITQLMTA AVA+VIVMALIQSGNGQITVGGFVSFITAMLMLL PLKQLAEINGP Sbjct: 241 FSSTVPITQLMTATAVAVVIVMALIQSGNGQITVGGFVSFITAMLMLLTPLKQLAEINGP 300 Query: 301 LQRGMAAAEEVYKLIDKTPERVTGEALQQRAQGEVELVDVSFSYPGHEQQALKNINLRVR 360 LQRGMAAAEEVYKLIDKT ER+TGEAL RA G+++ V+V F+YPGHEQ ALKNINL V Sbjct: 301 LQRGMAAAEEVYKLIDKTTERITGEALAGRATGQLDFVEVGFAYPGHEQLALKNINLHVE 360 Query: 361 AGETVAFVGMSGGGKSTLVSLLPGFHSVTAGKILLDGRDIESISLLSLRQQIAMVNQNTV 420 AGET+AFVGMSGGGKSTLVSL+PGF+S ++G+I LDGRDIE+ISL SLRQQIAMVNQNTV Sbjct: 361 AGETIAFVGMSGGGKSTLVSLIPGFYSCSSGEIRLDGRDIETISLPSLRQQIAMVNQNTV 420 Query: 421 LFDDTLAANISYGDQSPDPARILAAVEAAHLTDVVQGLPQGMETRIGDNGSRLSGGQRQR 480 LFDDTLAANI+YGD +PDPAR+ AAVEAAHLTDVV GLP+G++TR+GDNGSRLSGGQRQR Sbjct: 421 LFDDTLAANIAYGDANPDPARVEAAVEAAHLTDVVAGLPEGLQTRLGDNGSRLSGGQRQR 480 Query: 481 VAIARAIYKDAPILILDEATSALDTESERAVQAALERLMQGRTTFVIAHRLSTIERADRI 540 VAIARAIYKDAPILILDEATSALDTESERAVQAAL+RLMQGRTTFVIAHRLSTIERADRI Sbjct: 481 VAIARAIYKDAPILILDEATSALDTESERAVQAALDRLMQGRTTFVIAHRLSTIERADRI 540 Query: 541 VVLVHGQIAEIGNHQELLQRDGVYANLYRLQFSQQA 576 VVL HGQIAEIG HQ LL+++GVYANLYRLQFSQQA Sbjct: 541 VVLAHGQIAEIGTHQALLEQEGVYANLYRLQFSQQA 576 >ref|ZP_08273879.1| Lipid A export ATP-binding/permease protein MsbA [Oxalobacteraceae bacterium IMCC9480] gb|EGF32644.1| Lipid A export ATP-binding/permease protein MsbA [Oxalobacteraceae bacterium IMCC9480] Length = 578 Score = 760 bits (1963), Expect = 0.0, Method: Composition-based stats. Identities = 393/575 (68%), Positives = 471/575 (81%) Query: 2 LSNNIKRLAALHWPYKKRLALAFLGMIVTAATEPVVPYIFQVLLDKGFVGKPTFSLWLVP 61 S ++ RLA + P++ RL LAFLGM +TA+TEP+ P + + LLD GFVGK T LW VP Sbjct: 3 FSPHLMRLARMLKPFRGRLGLAFLGMAITASTEPMFPAVMKTLLDNGFVGKSTIPLWTVP 62 Query: 62 AAVIGIFLIRGMATFTSTYMMTWVSTRILNELRRQMFARMLDLPIHFYATNTVGKVINSM 121 AVIG+F++RG++TF +TYMMTWVST +LN LRRQMF+R+LD+P FY +VG+VINSM Sbjct: 63 VAVIGMFVLRGLSTFLTTYMMTWVSTHLLNILRRQMFSRLLDVPAQFYERTSVGRVINSM 122 Query: 122 MFEVQQIIDMVTKVFTSILRSALTVLGLLGWLLYLNWTLTIVTLVLLPLVSIVVRATGKR 181 MFEVQQII+MVTKVFTS++R +LTV+ LL +LL+LNW LTIV LVLLPL++IVVR TGKR Sbjct: 123 MFEVQQIIEMVTKVFTSLIRDSLTVIVLLAFLLWLNWRLTIVALVLLPLMAIVVRMTGKR 182 Query: 182 LKKLNRDSLAVNAELTQLIEETTRAQQVIKIFGGHEYEKKRFHDRAENLRRYTMRMTAAF 241 L+KL RD L VNAELTQ+IEETTRAQQVIKIFGGH+YEK RF RA LR Y+MRM + F Sbjct: 183 LRKLTRDFLDVNAELTQVIEETTRAQQVIKIFGGHDYEKNRFEQRAIKLRNYSMRMASTF 242 Query: 242 SSTVPITQLMTACAVAIVIVMALIQSGNGQITVGGFVSFITAMLMLLAPLKQLAEINGPL 301 ++TVPITQ+M +CAV++VIV+AL+QSG QIT GGFVSFITAMLMLL PLK LAE+NGPL Sbjct: 243 AATVPITQIMASCAVSVVIVIALLQSGQNQITAGGFVSFITAMLMLLTPLKHLAEVNGPL 302 Query: 302 QRGMAAAEEVYKLIDKTPERVTGEALQQRAQGEVELVDVSFSYPGHEQQALKNINLRVRA 361 QRG+AAAE V+ LID PER G AL R+ G +E +V F+YP AL NINL + Sbjct: 303 QRGIAAAEAVFALIDTPPERTNGVALTGRSVGHIEFQNVCFAYPEQTLPALANINLTIHP 362 Query: 362 GETVAFVGMSGGGKSTLVSLLPGFHSVTAGKILLDGRDIESISLLSLRQQIAMVNQNTVL 421 GETVAFVG+SGGGKSTLV+L+PGFH+ +G+I LDG ++S+SL SLR Q+AMV+QN VL Sbjct: 363 GETVAFVGISGGGKSTLVNLVPGFHTPQSGQICLDGAPLDSLSLTSLRSQMAMVSQNVVL 422 Query: 422 FDDTLAANISYGDQSPDPARILAAVEAAHLTDVVQGLPQGMETRIGDNGSRLSGGQRQRV 481 FDDT+AANI+YGD PD RI AA AAHLT+++ GLP+G ++ IGDNGSRLSGGQRQR+ Sbjct: 423 FDDTVAANIAYGDPQPDRERIEAAASAAHLTEMIMGLPKGFDSPIGDNGSRLSGGQRQRM 482 Query: 482 AIARAIYKDAPILILDEATSALDTESERAVQAALERLMQGRTTFVIAHRLSTIERADRIV 541 AIARAIYKDAPILILDEATSALD ESERAVQ+AL LMQ RTT VIAHRLSTIERADRIV Sbjct: 483 AIARAIYKDAPILILDEATSALDNESERAVQSALVDLMQNRTTLVIAHRLSTIERADRIV 542 Query: 542 VLVHGQIAEIGNHQELLQRDGVYANLYRLQFSQQA 576 VLV G I E+G H ELL RDGVYA+L+ LQF ++A Sbjct: 543 VLVSGHIVELGTHAELLARDGVYASLHHLQFEKEA 577 >ref|YP_001352225.1| ABC-type multidrug transport system, ATPase and permease components [Janthinobacterium sp. Marseille] gb|ABR90661.1| ABC-type multidrug transport system, ATPase and permease components [Janthinobacterium sp. Marseille] Length = 578 Score = 759 bits (1960), Expect = 0.0, Method: Composition-based stats. Identities = 397/574 (69%), Positives = 487/574 (84%) Query: 1 MLSNNIKRLAALHWPYKKRLALAFLGMIVTAATEPVVPYIFQVLLDKGFVGKPTFSLWLV 60 ++S ++KRL + PYKKRLA+A LGMI+TA TEP+ P + +VLLDKGF GKP+FSLWLV Sbjct: 2 IVSPHLKRLFGMLAPYKKRLAVALLGMIMTALTEPMFPAVMRVLLDKGFGGKPSFSLWLV 61 Query: 61 PAAVIGIFLIRGMATFTSTYMMTWVSTRILNELRRQMFARMLDLPIHFYATNTVGKVINS 120 P A++GIF++RG++TFT+TYMMTWVS+R+L LR+QMF RMLD+P+ FYAT++VG+VINS Sbjct: 62 PVAIVGIFVLRGISTFTTTYMMTWVSSRLLTTLRKQMFERMLDVPLGFYATHSVGRVINS 121 Query: 121 MMFEVQQIIDMVTKVFTSILRSALTVLGLLGWLLYLNWTLTIVTLVLLPLVSIVVRATGK 180 MMFEVQQII+M+TKV+TSI+R +LTV+ LL +L +LNW LT+V LVLLPL++IVVRATG+ Sbjct: 122 MMFEVQQIIEMITKVYTSIIRDSLTVIVLLSFLFWLNWRLTLVALVLLPLIAIVVRATGR 181 Query: 181 RLKKLNRDSLAVNAELTQLIEETTRAQQVIKIFGGHEYEKKRFHDRAENLRRYTMRMTAA 240 RL++L R+ VN E+TQ+IEETTRA QVIKIFGGH YE++RF RA+ LR YTMRM A Sbjct: 182 RLRRLTREYQTVNGEMTQVIEETTRANQVIKIFGGHRYEEERFEVRADKLRGYTMRMATA 241 Query: 241 FSSTVPITQLMTACAVAIVIVMALIQSGNGQITVGGFVSFITAMLMLLAPLKQLAEINGP 300 ++T P+TQ+M + AVAIVIV+ALIQSG Q TVGGFVSFITAMLMLL PLK +AE+NGP Sbjct: 242 MAATTPVTQVMASTAVAIVIVIALIQSGQNQTTVGGFVSFITAMLMLLTPLKNIAEVNGP 301 Query: 301 LQRGMAAAEEVYKLIDKTPERVTGEALQQRAQGEVELVDVSFSYPGHEQQALKNINLRVR 360 LQRG+ AAE V+KLID PER G+ L RA G ++ V + F+YPG + AL++INL V+ Sbjct: 302 LQRGLTAAEAVFKLIDAEPERTNGKDLAARAAGRLDFVRLGFTYPGQQTMALQDINLSVQ 361 Query: 361 AGETVAFVGMSGGGKSTLVSLLPGFHSVTAGKILLDGRDIESISLLSLRQQIAMVNQNTV 420 GET+AFVGMSGGGKSTLV+L+PGF+S TAG+I LDG IE ISL SLR+QIAMV+Q+ V Sbjct: 362 PGETIAFVGMSGGGKSTLVNLVPGFYSATAGEIQLDGVSIEEISLSSLRKQIAMVSQHVV 421 Query: 421 LFDDTLAANISYGDQSPDPARILAAVEAAHLTDVVQGLPQGMETRIGDNGSRLSGGQRQR 480 LFDDT+AANI+YGD +PD RI+AA AAHL +V+ GLP+G+ET IGDNGSRLSGGQRQR Sbjct: 422 LFDDTIAANIAYGDANPDRTRIMAAAHAAHLDEVIAGLPEGLETMIGDNGSRLSGGQRQR 481 Query: 481 VAIARAIYKDAPILILDEATSALDTESERAVQAALERLMQGRTTFVIAHRLSTIERADRI 540 +AIARAIYKDAPILILDEATSALD+ESERAVQAAL+ LM+GRTT VIAHRLSTIERADRI Sbjct: 482 LAIARAIYKDAPILILDEATSALDSESERAVQAALDELMKGRTTLVIAHRLSTIERADRI 541 Query: 541 VVLVHGQIAEIGNHQELLQRDGVYANLYRLQFSQ 574 VL G I E+G+HQELL R+GVYANLY LQF++ Sbjct: 542 AVLAEGHIVELGSHQELLARNGVYANLYHLQFAK 575 >ref|YP_001098803.1| lipid ABC transporter membrane/ATP-binding protein [Herminiimonas arsenicoxydans] emb|CAL60674.1| Lipid A export ATP-binding/permease protein MsbA [Herminiimonas arsenicoxydans] Length = 581 Score = 756 bits (1951), Expect = 0.0, Method: Composition-based stats. Identities = 391/574 (68%), Positives = 491/574 (85%) Query: 2 LSNNIKRLAALHWPYKKRLALAFLGMIVTAATEPVVPYIFQVLLDKGFVGKPTFSLWLVP 61 +S ++KRL + PYKKRLA+AF+GMI+TA TEP+ P + ++LLDKGF GKPTFSLWLVP Sbjct: 3 ISPHLKRLYGMLGPYKKRLAVAFIGMIMTALTEPMFPAVMRLLLDKGFGGKPTFSLWLVP 62 Query: 62 AAVIGIFLIRGMATFTSTYMMTWVSTRILNELRRQMFARMLDLPIHFYATNTVGKVINSM 121 A+IGIF++RG++TFT+TY MTWVS+R+L+ LR++MF R+LD+P+ FY T++VG+VINSM Sbjct: 63 LAIIGIFVLRGISTFTTTYTMTWVSSRLLSTLRKKMFERILDVPLGFYGTHSVGRVINSM 122 Query: 122 MFEVQQIIDMVTKVFTSILRSALTVLGLLGWLLYLNWTLTIVTLVLLPLVSIVVRATGKR 181 MFEVQQII+M+TKV+TSI+R +LTV+ LL +L +LNW LT+V LVLLPL++IVVR TGKR Sbjct: 123 MFEVQQIIEMITKVYTSIIRDSLTVIVLLAFLFWLNWRLTLVALVLLPLIAIVVRFTGKR 182 Query: 182 LKKLNRDSLAVNAELTQLIEETTRAQQVIKIFGGHEYEKKRFHDRAENLRRYTMRMTAAF 241 +++L R+ AVNAE+TQ+IEE+TRA QVIKIFGGH+YE RF RA+ LR YTMRM + Sbjct: 183 VRRLTREYQAVNAEMTQVIEESTRANQVIKIFGGHQYENDRFEVRADKLRSYTMRMASTL 242 Query: 242 SSTVPITQLMTACAVAIVIVMALIQSGNGQITVGGFVSFITAMLMLLAPLKQLAEINGPL 301 ++T P+TQ+M +CAVAIVIV+ALIQS Q TVGGFVSFITAMLMLLAPLK +AE+NGPL Sbjct: 243 AATTPVTQIMASCAVAIVIVIALIQSEQNQTTVGGFVSFITAMLMLLAPLKNIAEVNGPL 302 Query: 302 QRGMAAAEEVYKLIDKTPERVTGEALQQRAQGEVELVDVSFSYPGHEQQALKNINLRVRA 361 Q+G+ AAE V+ LID PER +G+ L+ RA G+++ +++ FSYPGH+ AL++INL V Sbjct: 303 QKGLTAAEAVFGLIDAKPERTSGKTLEARAAGKLDFINLGFSYPGHQSMALEDINLSVLP 362 Query: 362 GETVAFVGMSGGGKSTLVSLLPGFHSVTAGKILLDGRDIESISLLSLRQQIAMVNQNTVL 421 GET+AFVGMSGGGKSTLV+L+PGF+ T G+I LD IE I+L SLR+QIAMV+Q+ VL Sbjct: 363 GETIAFVGMSGGGKSTLVNLVPGFYPATVGEIRLDDVPIEEIALTSLRRQIAMVSQHVVL 422 Query: 422 FDDTLAANISYGDQSPDPARILAAVEAAHLTDVVQGLPQGMETRIGDNGSRLSGGQRQRV 481 FDDT+AANI+YGD++PD ARILAA AAHL DV+ GLPQG+ET IGDNGSRLSGGQRQR+ Sbjct: 423 FDDTIAANIAYGDETPDRARILAAATAAHLDDVIAGLPQGLETMIGDNGSRLSGGQRQRL 482 Query: 482 AIARAIYKDAPILILDEATSALDTESERAVQAALERLMQGRTTFVIAHRLSTIERADRIV 541 AIARAIYKDAPILILDEATSALD+ESERAVQAAL+ LM+GRTT VIAHRLSTIERADRI Sbjct: 483 AIARAIYKDAPILILDEATSALDSESERAVQAALDALMKGRTTLVIAHRLSTIERADRIA 542 Query: 542 VLVHGQIAEIGNHQELLQRDGVYANLYRLQFSQQ 575 VL G+I E+G+HQELL+++ VYANLY LQF+++ Sbjct: 543 VLAEGRIVELGSHQELLEKNAVYANLYHLQFAKE 576 >ref|YP_004751697.1| lipid A export ATP-binding/permease [Collimonas fungivorans Ter331] gb|AEK60874.1| Lipid A export ATP-binding/permease protein [Collimonas fungivorans Ter331] Length = 585 Score = 752 bits (1942), Expect = 0.0, Method: Composition-based stats. Identities = 390/570 (68%), Positives = 475/570 (83%) Query: 7 KRLAALHWPYKKRLALAFLGMIVTAATEPVVPYIFQVLLDKGFVGKPTFSLWLVPAAVIG 66 KRLA LH PYKKRL L LGM+VTAATEP+V YIF++LLD GFV KPTF LWLVP AVIG Sbjct: 11 KRLALLHRPYKKRLTLGLLGMVVTAATEPLVAYIFKILLDNGFVQKPTFPLWLVPIAVIG 70 Query: 67 IFLIRGMATFTSTYMMTWVSTRILNELRRQMFARMLDLPIHFYATNTVGKVINSMMFEVQ 126 F+ RG +TF +TYM WVSTR+L LR+QMF R+L++ I F+AT+TVG+VINS+MFEVQ Sbjct: 71 AFVARGASTFLTTYMTNWVSTRVLTTLRQQMFNRILNVSIDFHATHTVGRVINSIMFEVQ 130 Query: 127 QIIDMVTKVFTSILRSALTVLGLLGWLLYLNWTLTIVTLVLLPLVSIVVRATGKRLKKLN 186 QII+M++K+FTSI+R LTV GLLG++L+++W LTIV LVL+PL+ +VVR T KRLKKLN Sbjct: 131 QIIEMISKLFTSIVRCVLTVAGLLGYMLFISWKLTIVALVLMPLMMLVVRTTAKRLKKLN 190 Query: 187 RDSLAVNAELTQLIEETTRAQQVIKIFGGHEYEKKRFHDRAENLRRYTMRMTAAFSSTVP 246 +DSL VNA+LTQ+IEET RAQQVIK+FGG YE++RF + AE++R Y+MRMT+ F++TVP Sbjct: 191 KDSLDVNAQLTQVIEETARAQQVIKVFGGETYERQRFAESAEHIRHYSMRMTSTFAATVP 250 Query: 247 ITQLMTACAVAIVIVMALIQSGNGQITVGGFVSFITAMLMLLAPLKQLAEINGPLQRGMA 306 +TQ+M ACA++ +I M L+Q+ +GQ+T G FVSF+ AM+ L PLKQLAE+NGPLQRGMA Sbjct: 251 VTQIMMACAMSAMITMGLVQASHGQLTAGDFVSFLAAMIALQVPLKQLAEVNGPLQRGMA 310 Query: 307 AAEEVYKLIDKTPERVTGEALQQRAQGEVELVDVSFSYPGHEQQALKNINLRVRAGETVA 366 AAE V+KLID ER G L +RA G++E +V FSYPG E+ ALK INL V+ GET+A Sbjct: 311 AAEAVFKLIDSPIERTGGIQLDKRANGKIEFSNVGFSYPGQEKPALKGINLSVKPGETIA 370 Query: 367 FVGMSGGGKSTLVSLLPGFHSVTAGKILLDGRDIESISLLSLRQQIAMVNQNTVLFDDTL 426 FVGMSGGGKSTLV+L+PGF+S T G+ILLD IE ISL SLR QIAMV+QN VLF+DT+ Sbjct: 371 FVGMSGGGKSTLVNLIPGFYSTTEGRILLDDLPIEDISLNSLRAQIAMVSQNVVLFNDTI 430 Query: 427 AANISYGDQSPDPARILAAVEAAHLTDVVQGLPQGMETRIGDNGSRLSGGQRQRVAIARA 486 AANI+YGD +PD RI AA +AA+L +++ LP G ET+IGDNGSRLSGGQRQR+A+ARA Sbjct: 431 AANIAYGDSAPDRVRIEAAAKAAYLAEMIAALPDGYETQIGDNGSRLSGGQRQRLAMARA 490 Query: 487 IYKDAPILILDEATSALDTESERAVQAALERLMQGRTTFVIAHRLSTIERADRIVVLVHG 546 IYKDAPILILDEATSALDTESERAVQAAL++LMQGRTTFVIAHRLSTIERA RIVVL +G Sbjct: 491 IYKDAPILILDEATSALDTESERAVQAALDQLMQGRTTFVIAHRLSTIERASRIVVLSNG 550 Query: 547 QIAEIGNHQELLQRDGVYANLYRLQFSQQA 576 I EIG+H ELL + G YANLY LQFS+ A Sbjct: 551 SIVEIGSHDELLSKRGAYANLYHLQFSKDA 580