BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4435.p (487 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776951.1| cytoplasmic axial filament ribonuclease G pr... 926 0.0 ref|ZP_08275491.1| Ribonuclease E [Oxalobacteraceae bacterium IM... 839 0.0 ref|YP_004751701.1| cytoplasmic axial filament protein CafA and ... 830 0.0 ref|YP_001352227.1| ribonuclease G (RNAse G) (cytoplasmic axial ... 827 0.0 ref|YP_001098884.1| RNase G [Herminiimonas arsenicoxydans] >gi|1... 825 0.0 >ref|YP_003776951.1| cytoplasmic axial filament ribonuclease G protein [Herbaspirillum seropedicae SmR1] gb|ADJ65043.1| cytoplasmic axial filament ribonuclease G protein [Herbaspirillum seropedicae SmR1] Length = 487 Score = 926 bits (2393), Expect = 0.0, Method: Composition-based stats. Identities = 472/487 (96%), Positives = 476/487 (97%) Query: 1 MSEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI 60 MSEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI Sbjct: 1 MSEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI 60 Query: 61 GLERAAFLHVADIWEARPHDGQNAPAIPIEKLLHDGQTITVQVIKDPIGTKGARLSTQIS 120 GLERAAFLHVADIWEAR HDGQN PAIPIEKLLHDGQ+ITVQVIKDPIGTKGARLSTQIS Sbjct: 61 GLERAAFLHVADIWEARSHDGQNTPAIPIEKLLHDGQSITVQVIKDPIGTKGARLSTQIS 120 Query: 121 IAGRMLVYLPQDKHIGISQRIENEAERELLRSKVQALLPPEEKGGFIIRTMAEDASDSDL 180 IAGRMLVYLPQDKHIGISQRIENEAERELLRSKVQALLPPEEKGGFIIRTMAEDASD+DL Sbjct: 121 IAGRMLVYLPQDKHIGISQRIENEAERELLRSKVQALLPPEEKGGFIIRTMAEDASDADL 180 Query: 181 QMDVEYLRTTWATIIKQAKTKPAPTLLHQDLSLAQRVLRDFVSDQTATIQVDSRENFHML 240 QMDVEYLR TWATI+KQ KT PAPTLLHQDLSLAQRVLRDFV D TATIQVDSRENFHML Sbjct: 181 QMDVEYLRKTWATIVKQGKTNPAPTLLHQDLSLAQRVLRDFVGDHTATIQVDSRENFHML 240 Query: 241 QEFGAIYTPSVLPKLMHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQTEAMTT 300 QEFGAIYTPSVL KL HYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQTEAMTT Sbjct: 241 QEFGAIYTPSVLTKLTHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQTEAMTT 300 Query: 301 IDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMESTEHRHAVLA 360 IDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMESTEHR AVLA Sbjct: 301 IDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMESTEHRQAVLA 360 Query: 361 ELGKALHRDRTKISVSGFSTLGLVEMTRKRTRESLAHILCETCPACKGRGQVKTPRTVCY 420 ELGKAL RDRTKISVSGFSTLGLVEMTRKRTRESLAHILCETCPACKGRGQVKTPRTVCY Sbjct: 361 ELGKALQRDRTKISVSGFSTLGLVEMTRKRTRESLAHILCETCPACKGRGQVKTPRTVCY 420 Query: 421 EILREVMREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIGKPVSLQVQSDYQQE 480 EILREVMREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIGKP+SLQVQSDYQQE Sbjct: 421 EILREVMREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIGKPISLQVQSDYQQE 480 Query: 481 QYDIILM 487 QYDIILM Sbjct: 481 QYDIILM 487 >ref|ZP_08275491.1| Ribonuclease E [Oxalobacteraceae bacterium IMCC9480] gb|EGF31035.1| Ribonuclease E [Oxalobacteraceae bacterium IMCC9480] Length = 487 Score = 839 bits (2167), Expect = 0.0, Method: Composition-based stats. Identities = 424/487 (87%), Positives = 451/487 (92%) Query: 1 MSEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI 60 M+EDILINITPQETRVALILQGAVQELHIERTLSRG+AGNIYLGKV RVLPGMQSAFIDI Sbjct: 1 MNEDILINITPQETRVALILQGAVQELHIERTLSRGMAGNIYLGKVARVLPGMQSAFIDI 60 Query: 61 GLERAAFLHVADIWEARPHDGQNAPAIPIEKLLHDGQTITVQVIKDPIGTKGARLSTQIS 120 GLERAAFLHVADIWEAR HDG PA+PIEKLL DG ITVQVIKDPIGTKGARLSTQIS Sbjct: 61 GLERAAFLHVADIWEARSHDGPATPALPIEKLLFDGMAITVQVIKDPIGTKGARLSTQIS 120 Query: 121 IAGRMLVYLPQDKHIGISQRIENEAERELLRSKVQALLPPEEKGGFIIRTMAEDASDSDL 180 IAGRMLVYLPQD HIGISQRIE E+ERE LR KVQ LLPPEEKGGFIIRTMAEDAS++DL Sbjct: 121 IAGRMLVYLPQDSHIGISQRIEKESEREALRGKVQKLLPPEEKGGFIIRTMAEDASEADL 180 Query: 181 QMDVEYLRTTWATIIKQAKTKPAPTLLHQDLSLAQRVLRDFVSDQTATIQVDSRENFHML 240 QMD++YLR TW+TI AK+KP +LLHQDLSLAQRVLRDFV D T+TIQVDSRENF ML Sbjct: 181 QMDIDYLRKTWSTIAASAKSKPPTSLLHQDLSLAQRVLRDFVGDDTSTIQVDSRENFLML 240 Query: 241 QEFGAIYTPSVLPKLMHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQTEAMTT 300 Q+FG YTPSVL +L HY GERPLFDLYGVEEEI+RALGRRVDLKSGGYLIVDQTEAMTT Sbjct: 241 QQFGTSYTPSVLTRLSHYTGERPLFDLYGVEEEIQRALGRRVDLKSGGYLIVDQTEAMTT 300 Query: 301 IDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMESTEHRHAVLA 360 IDVNTGS+VNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDME+ EHR +VL+ Sbjct: 301 IDVNTGSYVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMENAEHRASVLS 360 Query: 361 ELGKALHRDRTKISVSGFSTLGLVEMTRKRTRESLAHILCETCPACKGRGQVKTPRTVCY 420 EL KAL RDRTK+SVSGFS LGLVEMTRKRTRESLA ILCETCPAC GRGQVKT RT+CY Sbjct: 361 ELHKALARDRTKMSVSGFSALGLVEMTRKRTRESLARILCETCPACSGRGQVKTARTICY 420 Query: 421 EILREVMREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIGKPVSLQVQSDYQQE 480 EILRE++REAKQFNPREFRILASQ+VVDMFLEEESQHLAMLGDFIGKP+SLQV++ YQQE Sbjct: 421 EILRELLREAKQFNPREFRILASQIVVDMFLEEESQHLAMLGDFIGKPISLQVETVYQQE 480 Query: 481 QYDIILM 487 QYDIILM Sbjct: 481 QYDIILM 487 >ref|YP_004751701.1| cytoplasmic axial filament protein CafA and ribonuclease G [Collimonas fungivorans Ter331] gb|AEK60878.1| Cytoplasmic axial filament protein CafA and Ribonuclease G [Collimonas fungivorans Ter331] Length = 487 Score = 830 bits (2143), Expect = 0.0, Method: Composition-based stats. Identities = 423/487 (86%), Positives = 449/487 (92%) Query: 1 MSEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI 60 MSEDIL+NITPQETRVALI QGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI Sbjct: 1 MSEDILVNITPQETRVALIFQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI 60 Query: 61 GLERAAFLHVADIWEARPHDGQNAPAIPIEKLLHDGQTITVQVIKDPIGTKGARLSTQIS 120 GLERAAFLHVADIWE R HDGQ A PIEK+L DGQ++TVQV+KDPIGTKGARLSTQIS Sbjct: 61 GLERAAFLHVADIWETRAHDGQAAQQTPIEKMLFDGQSLTVQVVKDPIGTKGARLSTQIS 120 Query: 121 IAGRMLVYLPQDKHIGISQRIENEAERELLRSKVQALLPPEEKGGFIIRTMAEDASDSDL 180 IAGRMLVYLPQD+HIGISQRIENEAERELL+ KVQ LLPPEEKGGFIIRTMAEDAS++DL Sbjct: 121 IAGRMLVYLPQDRHIGISQRIENEAERELLKDKVQKLLPPEEKGGFIIRTMAEDASEADL 180 Query: 181 QMDVEYLRTTWATIIKQAKTKPAPTLLHQDLSLAQRVLRDFVSDQTATIQVDSRENFHML 240 QMD+EYLR TW++I + AK+KPAPTLLHQDLSLAQRVLRDFV+D+T TIQVDSRENF L Sbjct: 181 QMDIEYLRKTWSSITQLAKSKPAPTLLHQDLSLAQRVLRDFVNDETTTIQVDSRENFQKL 240 Query: 241 QEFGAIYTPSVLPKLMHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQTEAMTT 300 QEF A YTPSV +L HY GERPLFDLYGVEEEI+ AL RRV LKSGGYLIVDQTEAMTT Sbjct: 241 QEFAATYTPSVTARLTHYTGERPLFDLYGVEEEIQEALSRRVPLKSGGYLIVDQTEAMTT 300 Query: 301 IDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMESTEHRHAVLA 360 IDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDME+ EH+ AVLA Sbjct: 301 IDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMENGEHKSAVLA 360 Query: 361 ELGKALHRDRTKISVSGFSTLGLVEMTRKRTRESLAHILCETCPACKGRGQVKTPRTVCY 420 EL KAL RDRTK SVS FS LGLVEMTRKRTRESLAHILCE CPAC G+GQVKT RT+CY Sbjct: 361 ELHKALLRDRTKKSVSEFSALGLVEMTRKRTRESLAHILCEPCPACNGKGQVKTARTICY 420 Query: 421 EILREVMREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIGKPVSLQVQSDYQQE 480 EILREV+REAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFI KP+SLQV++ Y QE Sbjct: 421 EILREVLREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIRKPISLQVETVYPQE 480 Query: 481 QYDIILM 487 QYDIILM Sbjct: 481 QYDIILM 487 >ref|YP_001352227.1| ribonuclease G (RNAse G) (cytoplasmic axial filament protein) [Janthinobacterium sp. Marseille] gb|ABR89103.1| ribonuclease G (RNAse G) (cytoplasmic axial filament protein) [Janthinobacterium sp. Marseille] Length = 487 Score = 827 bits (2135), Expect = 0.0, Method: Composition-based stats. Identities = 409/487 (83%), Positives = 450/487 (92%) Query: 1 MSEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI 60 MSEDIL+N+TPQETRVAL+LQGAVQELH+ERTLSRG+AGNIYLGKVVRVLPGMQSAF+DI Sbjct: 1 MSEDILVNVTPQETRVALVLQGAVQELHVERTLSRGMAGNIYLGKVVRVLPGMQSAFVDI 60 Query: 61 GLERAAFLHVADIWEARPHDGQNAPAIPIEKLLHDGQTITVQVIKDPIGTKGARLSTQIS 120 GLERAAFLHVADIW+AR H+G + PIE++L+DGQ +TVQVIKDPIGTKGARLSTQIS Sbjct: 61 GLERAAFLHVADIWDARSHEGPPSSPTPIERVLYDGQAVTVQVIKDPIGTKGARLSTQIS 120 Query: 121 IAGRMLVYLPQDKHIGISQRIENEAERELLRSKVQALLPPEEKGGFIIRTMAEDASDSDL 180 IAGRMLVYLPQ+ HIGISQRIENE ERE+LR KVQ L+ PEEKGGFIIRTMAEDASD DL Sbjct: 121 IAGRMLVYLPQESHIGISQRIENEVEREILREKVQKLILPEEKGGFIIRTMAEDASDGDL 180 Query: 181 QMDVEYLRTTWATIIKQAKTKPAPTLLHQDLSLAQRVLRDFVSDQTATIQVDSRENFHML 240 Q DVEYLR TWA I +QAKTKPAPTLL+QDL LAQRV+RDFV+D+TA+IQVDSREN+ L Sbjct: 181 QADVEYLRKTWANITQQAKTKPAPTLLYQDLDLAQRVMRDFVNDETASIQVDSRENYQKL 240 Query: 241 QEFGAIYTPSVLPKLMHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQTEAMTT 300 +FG +YTPSVL KL HY GERPLFDLYGVEEEI+RALGRRVDLKSGGYLIVDQTEAMTT Sbjct: 241 LQFGELYTPSVLSKLAHYPGERPLFDLYGVEEEIQRALGRRVDLKSGGYLIVDQTEAMTT 300 Query: 301 IDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMESTEHRHAVLA 360 IDVNTGSFVNGRNFDDTIFKTNLEA+HAIARQLRLRNLGGI+ILDFIDME+ EH+ AVL Sbjct: 301 IDVNTGSFVNGRNFDDTIFKTNLEASHAIARQLRLRNLGGIMILDFIDMENPEHKSAVLN 360 Query: 361 ELGKALHRDRTKISVSGFSTLGLVEMTRKRTRESLAHILCETCPACKGRGQVKTPRTVCY 420 EL +AL RDRTK+SVSGFS LGLVEMTRKRTRESLAHILCE CPAC G+GQVKT RT+CY Sbjct: 361 ELNRALSRDRTKVSVSGFSALGLVEMTRKRTRESLAHILCEPCPACSGKGQVKTARTICY 420 Query: 421 EILREVMREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIGKPVSLQVQSDYQQE 480 EILRE+ REAKQFNPREFRILASQVV+DMFLEEESQHLAMLGDF+GKP+SLQV++ Y QE Sbjct: 421 EILRELTREAKQFNPREFRILASQVVIDMFLEEESQHLAMLGDFLGKPISLQVETVYHQE 480 Query: 481 QYDIILM 487 QYD+ILM Sbjct: 481 QYDVILM 487 >ref|YP_001098884.1| RNase G [Herminiimonas arsenicoxydans] emb|CAL60757.1| RNase G (ribonuclease G) [Herminiimonas arsenicoxydans] Length = 487 Score = 825 bits (2132), Expect = 0.0, Method: Composition-based stats. Identities = 412/487 (84%), Positives = 451/487 (92%) Query: 1 MSEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI 60 MSEDIL+N+TPQETRVAL+LQGAVQELHIERTLSRG+AGNIYLGKVVRVLPGMQSAFIDI Sbjct: 1 MSEDILVNVTPQETRVALVLQGAVQELHIERTLSRGMAGNIYLGKVVRVLPGMQSAFIDI 60 Query: 61 GLERAAFLHVADIWEARPHDGQNAPAIPIEKLLHDGQTITVQVIKDPIGTKGARLSTQIS 120 GLERAAFLHVADIW+AR HDG IPIE++L DGQ+ITVQVIKDPIGTKGARLSTQIS Sbjct: 61 GLERAAFLHVADIWDARSHDGLPTTPIPIERILFDGQSITVQVIKDPIGTKGARLSTQIS 120 Query: 121 IAGRMLVYLPQDKHIGISQRIENEAERELLRSKVQALLPPEEKGGFIIRTMAEDASDSDL 180 IAGRMLVYLPQ+ HIGISQRIENE ERELLR KVQ L+ EKGGFIIRTMAEDASD DL Sbjct: 121 IAGRMLVYLPQESHIGISQRIENEVERELLREKVQKLMQEGEKGGFIIRTMAEDASDHDL 180 Query: 181 QMDVEYLRTTWATIIKQAKTKPAPTLLHQDLSLAQRVLRDFVSDQTATIQVDSRENFHML 240 QMDV+YLR TW+ I + AKTKPAP+LL+QDL LAQRV+RDFV+D+TA+IQVDSRENF L Sbjct: 181 QMDVDYLRKTWSNITQLAKTKPAPSLLYQDLDLAQRVMRDFVNDETASIQVDSRENFQKL 240 Query: 241 QEFGAIYTPSVLPKLMHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQTEAMTT 300 Q+FG +YTPSVL KL HY GERPLFDLYGVEEEI+RALGRRVDLKSGGYLIVDQTEAMTT Sbjct: 241 QQFGELYTPSVLTKLAHYPGERPLFDLYGVEEEIQRALGRRVDLKSGGYLIVDQTEAMTT 300 Query: 301 IDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMESTEHRHAVLA 360 IDVNTGSFVNGRNFDDTIFKTNLEA+HAIARQLRLRNLGG++ILDFIDME+ EHR+AVL+ Sbjct: 301 IDVNTGSFVNGRNFDDTIFKTNLEASHAIARQLRLRNLGGMVILDFIDMENVEHRNAVLS 360 Query: 361 ELGKALHRDRTKISVSGFSTLGLVEMTRKRTRESLAHILCETCPACKGRGQVKTPRTVCY 420 EL +AL RDRTK+SVSGFS LGLVEMTRKRTRESLAHILCE CPAC G+GQVKT RT+CY Sbjct: 361 ELNRALARDRTKVSVSGFSALGLVEMTRKRTRESLAHILCEPCPACGGKGQVKTARTICY 420 Query: 421 EILREVMREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIGKPVSLQVQSDYQQE 480 EILRE+ REAKQFNPREFRILASQVV+DMFLEEESQHLAMLGDF+GKP+SLQV++ Y QE Sbjct: 421 EILRELTREAKQFNPREFRILASQVVIDMFLEEESQHLAMLGDFLGKPISLQVEAVYHQE 480 Query: 481 QYDIILM 487 QYD+ILM Sbjct: 481 QYDVILM 487