BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4430.p (235 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776946.1| coproporphyrinogen III oxidase [Herbaspirill... 468 e-130 ref|YP_001352232.1| coproporphyrinogen III oxidase [Janthinobact... 414 e-114 ref|YP_001098889.1| coproporphyrinogen III oxidase [Herminiimona... 400 e-110 ref|YP_004751706.1| coproporphyrinogen III oxidase, aerobic [Col... 398 e-109 ref|YP_544458.1| coproporphyrinogen III oxidase [Methylobacillus... 393 e-107 >ref|YP_003776946.1| coproporphyrinogen III oxidase [Herbaspirillum seropedicae SmR1] gb|ADJ65038.1| coproporphyrinogen III oxidase protein [Herbaspirillum seropedicae SmR1] Length = 324 Score = 468 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 224/235 (95%), Positives = 230/235 (97%) Query: 1 MGKNLPPSAAANRPQLAGRAWEAMGVSLVLHPRNPYVPTVHMNVRFFTTHAEGEEAVWWF 60 MGKNLPPSAAANRP LAGRAWEAMGVSLVLHPRNPYVPTVHMNVRFFTTHAEGEEAVWWF Sbjct: 90 MGKNLPPSAAANRPHLAGRAWEAMGVSLVLHPRNPYVPTVHMNVRFFTTHAEGEEAVWWF 149 Query: 61 GGGMDLTPYYGVKEDAVHFHRTCRDALQPYGEDLYPRFKKWCDDYFYLKHRKEPRGVGGI 120 GGGMDLTPYYGV++DA HFHRTCRDALQPYG++LYPRFK WCDDYFYLKHRKEPRGVGGI Sbjct: 150 GGGMDLTPYYGVEDDARHFHRTCRDALQPYGDELYPRFKTWCDDYFYLKHRKEPRGVGGI 209 Query: 121 FFDDFNALPFEQAFALQRSVGDAFLDAYLPIVAARREMPYGERERDFQAYRRGRYVEFNL 180 FFDDFNALPFEQAFA+QRSVGDAFL AYLPIVAARR+ PYGERERDFQAYRRGRYVEFNL Sbjct: 210 FFDDFNALPFEQAFAMQRSVGDAFLAAYLPIVAARRDTPYGERERDFQAYRRGRYVEFNL 269 Query: 181 VFDRGTLFGLQSGGRTESILMSMPPLVKWRYDWHPEPGSPEAALYSDFLVHKEWL 235 VFDRGTLFGLQSGGRTESILMSMPPLVKWRYDWHPEPGSPEAALYSDFLVHKEWL Sbjct: 270 VFDRGTLFGLQSGGRTESILMSMPPLVKWRYDWHPEPGSPEAALYSDFLVHKEWL 324 >ref|YP_001352232.1| coproporphyrinogen III oxidase [Janthinobacterium sp. Marseille] gb|ABR88385.1| coproporphyrinogen III oxidase [Janthinobacterium sp. Marseille] Length = 332 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 188/235 (80%), Positives = 212/235 (90%) Query: 1 MGKNLPPSAAANRPQLAGRAWEAMGVSLVLHPRNPYVPTVHMNVRFFTTHAEGEEAVWWF 60 MGKNLPPSAAANRP+LAGR WEAMGVSLVLHPRNPY PTVHMNVRFFT AEG++A+WWF Sbjct: 98 MGKNLPPSAAANRPELAGRNWEAMGVSLVLHPRNPYAPTVHMNVRFFTATAEGQDAIWWF 157 Query: 61 GGGMDLTPYYGVKEDAVHFHRTCRDALQPYGEDLYPRFKKWCDDYFYLKHRKEPRGVGGI 120 GGGMDLTPYYG +EDA+HFH+TCRDALQ +G+D++PR+KKWCDDYFYLKHR+EPRGVGGI Sbjct: 158 GGGMDLTPYYGFEEDALHFHQTCRDALQAFGDDVHPRYKKWCDDYFYLKHRQEPRGVGGI 217 Query: 121 FFDDFNALPFEQAFALQRSVGDAFLDAYLPIVAARREMPYGERERDFQAYRRGRYVEFNL 180 FFDD N F Q FALQ+SVGD F+ AYLP++ R + PYGERERDFQ YRRGRYVEFNL Sbjct: 218 FFDDLNTPDFAQCFALQQSVGDHFIAAYLPLLQKRMDTPYGERERDFQTYRRGRYVEFNL 277 Query: 181 VFDRGTLFGLQSGGRTESILMSMPPLVKWRYDWHPEPGSPEAALYSDFLVHKEWL 235 VFDRGTLFGLQSGGRTESILMSMPP+V WRY+W PE GSPEA LYSDFL+H++W+ Sbjct: 278 VFDRGTLFGLQSGGRTESILMSMPPVVTWRYNWQPEAGSPEARLYSDFLIHRDWV 332 >ref|YP_001098889.1| coproporphyrinogen III oxidase [Herminiimonas arsenicoxydans] emb|CAL60762.1| coproporphyrinogen III oxidase, aerobic (Coproporphyrinogenase) (Coprogen oxidase) [Herminiimonas arsenicoxydans] Length = 325 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 181/235 (77%), Positives = 208/235 (88%) Query: 1 MGKNLPPSAAANRPQLAGRAWEAMGVSLVLHPRNPYVPTVHMNVRFFTTHAEGEEAVWWF 60 MGKNLPPSAAANRP+LAGR WEAMGVSLVLHPRNPY PTVHMNVRFF EG E +WWF Sbjct: 91 MGKNLPPSAAANRPELAGRNWEAMGVSLVLHPRNPYAPTVHMNVRFFIASTEGAEPIWWF 150 Query: 61 GGGMDLTPYYGVKEDAVHFHRTCRDALQPYGEDLYPRFKKWCDDYFYLKHRKEPRGVGGI 120 GGGMDLTPYYG ++DA HFH+ CRDAL +G++++PR+KKWCDDYFYLKHR+EPRGVGGI Sbjct: 151 GGGMDLTPYYGFEDDARHFHQVCRDALLAFGDEVHPRYKKWCDDYFYLKHRQEPRGVGGI 210 Query: 121 FFDDFNALPFEQAFALQRSVGDAFLDAYLPIVAARREMPYGERERDFQAYRRGRYVEFNL 180 FFDD N FE+ FALQ+SVG+ F++AY+PI+ R++MPYGERERDFQ YRRGRYVEFNL Sbjct: 211 FFDDLNEGGFERCFALQQSVGNHFVEAYVPILKLRKDMPYGERERDFQTYRRGRYVEFNL 270 Query: 181 VFDRGTLFGLQSGGRTESILMSMPPLVKWRYDWHPEPGSPEAALYSDFLVHKEWL 235 VFDRGTLFGLQSGGRTESILMSMPP+V WRY+W PE GS EA L+SDFL+H+EW+ Sbjct: 271 VFDRGTLFGLQSGGRTESILMSMPPVVTWRYNWQPEAGSAEARLHSDFLIHREWI 325 >ref|YP_004751706.1| coproporphyrinogen III oxidase, aerobic [Collimonas fungivorans Ter331] gb|AEK60883.1| Coproporphyrinogen III oxidase, aerobic [Collimonas fungivorans Ter331] Length = 321 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 185/239 (77%), Positives = 210/239 (87%), Gaps = 4/239 (1%) Query: 1 MGKNLPPSAAANRPQLAGRAWEAMGVSLVLHPRNPYVPTVHMNVRFFTTHAEGEEAVWWF 60 MGK+LPPSAAANRP+LAGR WEAMGVSLV+HPRNP+ PTVHMNVRFF AEG+E VWWF Sbjct: 83 MGKSLPPSAAANRPELAGRQWEAMGVSLVMHPRNPFAPTVHMNVRFFIASAEGQEPVWWF 142 Query: 61 GGGMDLTPYYGVKEDAVHFHRTCRDALQPYGE----DLYPRFKKWCDDYFYLKHRKEPRG 116 GGG+DLTPYYG ED HFHR CRDAL P+ + LYPRFK+WCDDYFYLKHRKEPRG Sbjct: 143 GGGIDLTPYYGFTEDVEHFHRGCRDALAPFDDGAEPKLYPRFKQWCDDYFYLKHRKEPRG 202 Query: 117 VGGIFFDDFNALPFEQAFALQRSVGDAFLDAYLPIVAARREMPYGERERDFQAYRRGRYV 176 VGGIFFDDFN L FEQ+FA+ +SVG+AF+ AY PI+A R+++PYGE ERDFQAYRRGRYV Sbjct: 203 VGGIFFDDFNQLGFEQSFAMMQSVGNAFIPAYAPILARRKDIPYGETERDFQAYRRGRYV 262 Query: 177 EFNLVFDRGTLFGLQSGGRTESILMSMPPLVKWRYDWHPEPGSPEAALYSDFLVHKEWL 235 EFNLV+DRGTLFGLQSGGRTESILMSMPP+VKWRY+W P GSPEA LY+DFL+H+EW+ Sbjct: 263 EFNLVYDRGTLFGLQSGGRTESILMSMPPVVKWRYNWQPAAGSPEARLYTDFLIHREWV 321 >ref|YP_544458.1| coproporphyrinogen III oxidase [Methylobacillus flagellatus KT] sp|Q1H4H0|HEM6_METFK RecName: Full=Coproporphyrinogen-III oxidase, aerobic; Short=Coprogen oxidase; Short=Coproporphyrinogenase gb|ABE48617.1| coproporphyrinogen oxidase [Methylobacillus flagellatus KT] Length = 302 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 180/235 (76%), Positives = 204/235 (86%) Query: 1 MGKNLPPSAAANRPQLAGRAWEAMGVSLVLHPRNPYVPTVHMNVRFFTTHAEGEEAVWWF 60 +G LPPSA+ P+ AGR+W+AMGVSLV HPRNPYVPTVHMNVRFF GEE +WWF Sbjct: 64 IGNKLPPSASVAHPEAAGRSWQAMGVSLVFHPRNPYVPTVHMNVRFFVAEKPGEEPIWWF 123 Query: 61 GGGMDLTPYYGVKEDAVHFHRTCRDALQPYGEDLYPRFKKWCDDYFYLKHRKEPRGVGGI 120 GGGMDLTPYYG +EDAVHFHRTCRDA+ P+GE YPRFKK CDDYFYLKHRKE RG+GGI Sbjct: 124 GGGMDLTPYYGFEEDAVHFHRTCRDAVAPFGEQYYPRFKKECDDYFYLKHRKEARGIGGI 183 Query: 121 FFDDFNALPFEQAFALQRSVGDAFLDAYLPIVAARREMPYGERERDFQAYRRGRYVEFNL 180 FFDDFN L FEQ+FA QRSVGDAF++AYLPIV R+++PY ERERDFQAYRRGRYVEFNL Sbjct: 184 FFDDFNELGFEQSFAFQRSVGDAFINAYLPIVQRRKDIPYSERERDFQAYRRGRYVEFNL 243 Query: 181 VFDRGTLFGLQSGGRTESILMSMPPLVKWRYDWHPEPGSPEAALYSDFLVHKEWL 235 ++DRGT+FGLQS GRTESIL+SMPP+VKWRYDW PE GSPEA LYSDF+ ++WL Sbjct: 244 IYDRGTIFGLQSNGRTESILLSMPPIVKWRYDWKPEAGSPEARLYSDFITGRDWL 298