BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4417.p (217 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776938.1| lipoprotein [Herbaspirillum seropedicae SmR1... 372 e-101 ref|YP_001352242.1| hypothetical protein mma_0552 [Janthinobacte... 178 4e-43 ref|YP_004751713.1| putative lipoprotein transmembrane [Collimon... 178 6e-43 ref|YP_001098902.1| putative lipoprotein [Herminiimonas arsenico... 169 3e-40 ref|ZP_02356576.1| putative lipoprotein [Burkholderia oklahomens... 129 3e-28 >ref|YP_003776938.1| lipoprotein [Herbaspirillum seropedicae SmR1] gb|ADJ65030.1| lipoprotein [Herbaspirillum seropedicae SmR1] Length = 280 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 189/217 (87%), Positives = 206/217 (94%) Query: 1 MKRWLYPLLAAASLLLSGCASVIESNVTSFHAWSPDYNQRAYAFAPAKEQENDLQYQNYA 60 MKRW+YPLLA A+LLLSGCA+VI++NVTSFHAW+P YN + YAFAP KEQEN+L+YQNYA Sbjct: 64 MKRWIYPLLALATLLLSGCATVIDNNVTSFHAWTPSYNDKPYAFAPTKEQENNLEYQNYA 123 Query: 61 GLIRQELQFLGFTEARDLKSAQLQVSFGYGMNTEQVVVSRPAYDPFFYGPGPGWGRFGPR 120 LIRQELQFLGFTEA++ + AQLQVSF YGMNTEQVVV+RPAYDPFFYGP PGWGRFGPR Sbjct: 124 SLIRQELQFLGFTEAKEARQAQLQVSFSYGMNTEQVVVTRPAYDPFFYGPAPGWGRFGPR 183 Query: 121 PFGFYGPYGPFYDPFWYGGPMQTTSYPVFLRRLQIGITEAGGGKKLFDVVVDSEGSRAGL 180 PFGFYGPYGPFYDPFWYGGPMQ+TSYPVFLRRLQIGITEAGGGKKLFDVVVDSEGSRAGL Sbjct: 184 PFGFYGPYGPFYDPFWYGGPMQSTSYPVFLRRLQIGITEAGGGKKLFDVVVDSEGSRAGL 243 Query: 181 AAAMPAMVRAAFEDFPGPSGVTRHIRIKVDKNGQPMD 217 AAAMPAMVRAAF+DFPGPSGVTR +RIKVDK+GQPMD Sbjct: 244 AAAMPAMVRAAFDDFPGPSGVTRQVRIKVDKDGQPMD 280 >ref|YP_001352242.1| hypothetical protein mma_0552 [Janthinobacterium sp. Marseille] gb|ABR90937.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 205 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 98/217 (45%), Positives = 132/217 (60%), Gaps = 18/217 (8%) Query: 1 MKRWLYPLLAAASLLLSGCASVIESNVTSFHAWSPDYNQRAYAFAPAKEQENDLQYQNYA 60 MKRWL +A +SLLLSGCASVI ++V +FH W D ++Y F Q+N+L+ ++Y Sbjct: 1 MKRWLLMGIALSSLLLSGCASVIRTDVIAFHEWPADLQNKSYVFERKAGQDNNLEEKSYE 60 Query: 61 GLIRQELQFLGFTEARDLKSAQLQVSFGYGMNTEQVVVSRP-AYDPFFYGP--GPGWGRF 117 L++ EL LGFTEA +A L+V+ Y +++ V +P DP++YGP GPGW Sbjct: 61 SLVKNELTRLGFTEAAAPSAANLKVALNYKIDSRDVRTVQPYVVDPYWYGPYYGPGW--- 117 Query: 118 GPRPFGFYGPYGPFYDPFWYGGPM---QTTSYPVFLRRLQIGITEAGGGKKLFDVVVDSE 174 YGP+YDPFWY GP+ + Y VF R+L + IT GKKL+DV V S Sbjct: 118 ---------RYGPYYDPFWYPGPVTQYREVQYQVFQRQLNVLITTIKDGKKLYDVTVHSS 168 Query: 175 GSRAGLAAAMPAMVRAAFEDFPGPSGVTRHIRIKVDK 211 G LA AMP MVRAAF DFPG +GV R I +++ + Sbjct: 169 GGNGSLAFAMPYMVRAAFTDFPGKNGVPRRIDLEIKE 205 >ref|YP_004751713.1| putative lipoprotein transmembrane [Collimonas fungivorans Ter331] gb|AEK60890.1| putative lipoprotein transmembrane [Collimonas fungivorans Ter331] Length = 210 Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats. Identities = 101/214 (47%), Positives = 131/214 (61%), Gaps = 11/214 (5%) Query: 1 MKRWLYPLLAAASLLLSGCASVIESNVTSFHAWSPDYNQRAYAFAPAKEQENDLQYQNYA 60 MKR + LAA +LLL GCA+VI S+VT+F+ W D ++Y F ENDL+Y+NY Sbjct: 1 MKRIITLCLAAFTLLLGGCATVIRSDVTAFNEWPADLPNKSYVFEHTAAHENDLEYRNYE 60 Query: 61 GLIRQELQFLGFTEARDLKSAQLQVSFGYGMNTEQVVVSRPAY-DPFFYGPGPGWGRFGP 119 L+R ELQ LGF +A D S QL+V+ YG+ V V P DP +YGP +GP Sbjct: 61 NLVRTELQRLGFVQA-DGGSPQLKVALNYGIAARDVHVVEPVVADPMWYGP------YGP 113 Query: 120 RPFGFYGPYGPFYDPFWYGGPM---QTTSYPVFLRRLQIGITEAGGGKKLFDVVVDSEGS 176 +G G Y PFYDPFWY + + ++ +F RRL I IT A GG+KL+DV V SEG Sbjct: 114 YGWGRPGFYSPFYDPFWYAPQVVGQREYNFQLFQRRLNIAITRAAGGQKLYDVTVTSEGK 173 Query: 177 RAGLAAAMPAMVRAAFEDFPGPSGVTRHIRIKVD 210 L A MP +VR+AF DFPG SGV + +KV+ Sbjct: 174 MNSLPAVMPYLVRSAFTDFPGKSGVPHQVELKVE 207 >ref|YP_001098902.1| putative lipoprotein [Herminiimonas arsenicoxydans] emb|CAL60775.1| conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 210 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 95/213 (44%), Positives = 131/213 (61%), Gaps = 11/213 (5%) Query: 1 MKRWLYPLLAAASLLLSGCASVIESNVTSFHAWSPDYNQRAYAFAPAKEQENDLQYQNYA 60 M+R L+ +A AS+LLSGCAS I+S+V +FH W D + Y F EQ NDL+Y++Y Sbjct: 1 MRRCLWIFIAVASVLLSGCASFIKSDVVAFHEWPADLQNKTYIFDRKTEQANDLEYRSYE 60 Query: 61 GLIRQELQFLGFTEARDLKSAQLQVSFGYGMNTEQVVVSRPAY-DPFFYGPGPGWGRFGP 119 L+R EL LGF EA+D + A L+V+ Y ++ V P DP++YG R Sbjct: 61 NLVRTELGRLGFAEAQDPRGANLKVALQYRIDARDVTAMEPVLVDPYWYGYPYYGPR--- 117 Query: 120 RPFGFYGPYGPFYDPFWYGGPM---QTTSYPVFLRRLQIGITEAGGGKKLFDVVVDSEGS 176 + G YGP+YDPFWY GP+ + Y VF R+L I IT + GKKL+DV V+S+G+ Sbjct: 118 ----WRGYYGPYYDPFWYPGPVTQYREVQYQVFQRQLNILITRSKDGKKLYDVTVNSDGN 173 Query: 177 RAGLAAAMPAMVRAAFEDFPGPSGVTRHIRIKV 209 +A AMP MVR+AF DFPG SGV + +++ Sbjct: 174 NGSMAFAMPYMVRSAFSDFPGRSGVPHRVNLEI 206 >ref|ZP_02356576.1| putative lipoprotein [Burkholderia oklahomensis EO147] Length = 234 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 113/206 (54%), Gaps = 10/206 (4%) Query: 10 AAASLLLSGCASVIESNVTSFHAWSPDYNQRAYAFAPAKEQENDLQYQNYAGLIRQELQF 69 A +LLSGC S + + VT+F WS R+YAF EQ+N L+ Y ++ EL Sbjct: 15 GALIVLLSGCTSYVATQVTAFSNWSGSDATRSYAFVRTAEQQNSLEQSTYEQIVGNELST 74 Query: 70 LGFTEARDLKSAQLQVSFGYGMNTEQVVVSRPAYDPFFYGPGPGWGRFGPRPFGFYGPYG 129 FT K A+ V YG+ ++ V V +P Y ++GPGP W R GP +G +GP+G Sbjct: 75 YAFTRV-PTKDARYLVGLAYGIKSDWVSVPQPVYYDPWFGPGPYW-RGGP--WGPFGPWG 130 Query: 130 PFYDPFWYGGPMQTTSYPVFLRRLQIGITEAGGGKKLFDVVVDSEGSRAGLAAAMPAMVR 189 PF P Y SY +F R L+I ITE GK++++V + G + L AMP + R Sbjct: 131 PF--PAGY----VNQSYQIFQRSLEIRITERATGKEVYNVAARNAGEGSSLLQAMPYLAR 184 Query: 190 AAFEDFPGPSGVTRHIRIKVDKNGQP 215 AA DFP +G R +R+ VDKNG P Sbjct: 185 AALADFPLGNGTVRTVRLPVDKNGAP 210