BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4384.p         (156 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004278148.1| Lysine exporter protein [Agrobacterium sp. H...   151   3e-35
gb|EGP57698.1| Lysine exporter protein (LYSE/YGGA) [Agrobacteriu...   149   1e-34
ref|YP_004158048.1| lysine exporter protein LysE/YggA [Variovora...   138   3e-31
ref|YP_004010515.1| lysine exporter LysE/YggA [Rhodomicrobium va...   135   2e-30
ref|YP_002946935.1| lysine exporter LysE/YggA [Variovorax parado...   122   1e-26

>ref|YP_004278148.1| Lysine exporter protein [Agrobacterium sp. H13-3]
 gb|ADY63828.1| Lysine exporter protein [Agrobacterium sp. H13-3]
          Length = 221

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 89/156 (57%), Positives = 117/156 (75%), Gaps = 1/156 (0%)

Query: 1   MIGVAAVGMGALLMASQMAFTVVKVLGAAYLIWLGCKLFFARVELGGQPLEPQQRSI-AG 59
           MI +AA+G+GALLMAS+M F+++K +G  YL+W+G KL  +R ++    +     +I   
Sbjct: 66  MIAIAALGLGALLMASEMMFSLIKWIGVLYLLWIGFKLIRSRADVTAPDISSGNGNILKT 125

Query: 60  YVRKEFLVAIGNPKAILVFTAFFPQFVVPENYLSSFLTLGAIFLALEVVAIAAYAYAGTR 119
           Y+R+EF VA GNPKAIL+FTAFFPQF+  + Y  SF TLGAIFL LEVVAI  YA+ G+R
Sbjct: 126 YLRQEFFVASGNPKAILIFTAFFPQFIQQDAYWQSFATLGAIFLLLEVVAITVYAFVGSR 185

Query: 120 LSGLMQNARGLRWMNRISGGMMIFFGTLLALAKRPA 155
           LSGLM+NAR L+ +NRISG MM+ FG +LA A+RPA
Sbjct: 186 LSGLMRNARALKRVNRISGSMMMAFGVMLAFARRPA 221


>gb|EGP57698.1| Lysine exporter protein (LYSE/YGGA) [Agrobacterium tumefaciens F2]
          Length = 208

 Score =  149 bits (376), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 88/156 (56%), Positives = 117/156 (75%), Gaps = 1/156 (0%)

Query: 1   MIGVAAVGMGALLMASQMAFTVVKVLGAAYLIWLGCKLFFARVELGGQPLEPQQRSI-AG 59
           MI +AA+G+GALLMAS+M F+++K +G  YL+W+G KL  +R ++    +     ++   
Sbjct: 53  MIAIAALGLGALLMASEMMFSLIKWIGVLYLLWIGFKLIRSRADVTAPDVSSGNGNVLKT 112

Query: 60  YVRKEFLVAIGNPKAILVFTAFFPQFVVPENYLSSFLTLGAIFLALEVVAIAAYAYAGTR 119
           Y+R+EF VA GNPKAIL+FTAFFPQF+  + Y  SF TLGAIFL LEVVAI  YA+ G+R
Sbjct: 113 YLRQEFFVASGNPKAILIFTAFFPQFIQQDAYWQSFATLGAIFLLLEVVAITVYAFVGSR 172

Query: 120 LSGLMQNARGLRWMNRISGGMMIFFGTLLALAKRPA 155
           LSGLM+NAR L+ +NRISG MM+ FG +LA A+RPA
Sbjct: 173 LSGLMRNARALKRVNRISGSMMMAFGVMLAFARRPA 208


>ref|YP_004158048.1| lysine exporter protein LysE/YggA [Variovorax paradoxus EPS]
 gb|ADU39937.1| Lysine exporter protein (LYSE/YGGA) [Variovorax paradoxus EPS]
          Length = 210

 Score =  138 bits (347), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 84/161 (52%), Positives = 111/161 (68%), Gaps = 8/161 (4%)

Query: 1   MIGVAAVGMGALLMASQMAFTVVKVLGAAYLIWLGCKLF-----FARVELGGQPLEPQQR 55
           MI VA +GMGA+L+AS++AF V+K +GAAYL+W+G +L       A V+  G    P  R
Sbjct: 53  MIAVAGLGMGAVLVASELAFDVIKYIGAAYLVWIGIRLLRAPAPTADVQSQGTAAPPSMR 112

Query: 56  SIAGYVRKEFLVAIGNPKAILVFTAFFPQFVVPENYLSSFLTLGAIFLALEVVAIAAYAY 115
           ++A   R+EF VA GNPKAILVFTAFFPQFVVP  Y SS++ LGA FL  E++AIA YA 
Sbjct: 113 ALA---RQEFTVAAGNPKAILVFTAFFPQFVVPGAYASSYVLLGATFLVFELIAIALYAM 169

Query: 116 AGTRLSGLMQNARGLRWMNRISGGMMIFFGTLLALAKRPAA 156
            G R+  L   +R +RW N++SG MM+ FG +LA  +RP +
Sbjct: 170 LGARMRRLANGSRAMRWFNKVSGSMMVGFGLILAFTRRPTS 210


>ref|YP_004010515.1| lysine exporter LysE/YggA [Rhodomicrobium vannielii ATCC 17100]
 gb|ADP69416.1| Lysine exporter protein (LYSE/YGGA) [Rhodomicrobium vannielii ATCC
           17100]
          Length = 207

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 81/156 (51%), Positives = 106/156 (67%)

Query: 1   MIGVAAVGMGALLMASQMAFTVVKVLGAAYLIWLGCKLFFARVELGGQPLEPQQRSIAGY 60
           MI + A GMGALLMAS+ AFT VK+LGAAYL+W+G +L  A+        +   ++   +
Sbjct: 52  MIAITAAGMGALLMASEAAFTAVKLLGAAYLVWIGVRLIIAKGFDTLAAPKDSTQAPGSF 111

Query: 61  VRKEFLVAIGNPKAILVFTAFFPQFVVPENYLSSFLTLGAIFLALEVVAIAAYAYAGTRL 120
           +R+EFLVA  NPKA+L+FTAF PQFV   +Y  SFL +G +FL LEV AIA YA  G+R+
Sbjct: 112 LRQEFLVAASNPKAMLIFTAFLPQFVDQSDYWRSFLLVGVVFLILEVPAIAIYALIGSRI 171

Query: 121 SGLMQNARGLRWMNRISGGMMIFFGTLLALAKRPAA 156
             L Q     RW+NR+SG MM+ FG  LA A+RPA+
Sbjct: 172 GRLAQGGSASRWINRVSGSMMVAFGVALAFARRPAS 207


>ref|YP_002946935.1| lysine exporter LysE/YggA [Variovorax paradoxus S110]
 gb|ACS21669.1| Lysine exporter protein (LYSE/YGGA) [Variovorax paradoxus S110]
          Length = 210

 Score =  122 bits (307), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 82/153 (53%), Positives = 103/153 (67%), Gaps = 2/153 (1%)

Query: 6   AVGMGALLMASQMAFTVVKVLGAAYLIWLGCKLF--FARVELGGQPLEPQQRSIAGYVRK 63
            +GMGA+L+AS++AF V+K +GAAYL+W+G +L    A              S+   VR+
Sbjct: 58  GLGMGAVLVASELAFDVIKYIGAAYLVWIGVRLLRAPAPAAEAQAADAAAPPSMRALVRQ 117

Query: 64  EFLVAIGNPKAILVFTAFFPQFVVPENYLSSFLTLGAIFLALEVVAIAAYAYAGTRLSGL 123
           EF VA GNPKAILVFTAFFPQFVVP  Y +S+L LG  FL LEVVAIA YA  G R+  L
Sbjct: 118 EFTVAAGNPKAILVFTAFFPQFVVPGAYATSYLLLGTTFLLLEVVAIALYAMLGARMRRL 177

Query: 124 MQNARGLRWMNRISGGMMIFFGTLLALAKRPAA 156
              +R +RW N++SG MM+ FG LLA  +RPAA
Sbjct: 178 ADGSRAMRWFNKVSGSMMVGFGLLLAFTRRPAA 210