BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4375.p (396 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_393606.1| 2,3,4,5-tetrahydropyridine-2-carboxylate N-succ... 227 3e-57 sp|Q30RL0|DAPD_SULDN RecName: Full=2,3,4,5-tetrahydropyridine-2,... 224 2e-56 ref|YP_001358895.1| tetrahydrodipicolinate N-succinyltransferase... 220 3e-55 ref|ZP_05625262.1| 2,3,4,5-tetrahydropyridine-2-carboxylate N-su... 217 3e-54 dbj|BAK71015.1| 2,3,4,5-tetrahydropyridine-2-carboxylate N-succi... 216 8e-54 >ref|YP_393606.1| 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [Sulfurimonas denitrificans DSM 1251] gb|ABB44371.1| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [Sulfurimonas denitrificans DSM 1251] Length = 424 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 162/407 (39%), Positives = 212/407 (52%), Gaps = 37/407 (9%) Query: 11 TVDAFKQVVEDFKASA-GYKEPLLFAVGSRVFTGNGTLASV---RYPVVNGPGQNTASAA 66 T +AFK +V+D K S GYKEPL F V RV G L YPV+N +N SAA Sbjct: 32 TTEAFKALVQDIKTSINGYKEPLAFGV-CRVDMGQLNLEKTLQATYPVINW-NENFGSAA 89 Query: 67 IWMKVL---GVTPAGVQN---ITVSAAQLTEILAYFAPFKND--GKYHGNVIALEQALE- 117 I++K L GV Q+ ++ A L L F+P+ + G H N+ + Sbjct: 90 IFIKALQEQGVEIDFTQSEVICNINKAFLKSCLNAFSPYSEEAYGDAHKNIQVISALYNQ 149 Query: 118 -ATKAGPANRVVITFIFDDIDPQGVEDSTLKLYGLSHRCFKPNQLNLTKVFTKLPNVAWI 176 AT +TFIF D + VE + LKLY LS + +NL F LPNVAW Sbjct: 150 IATSGSKDGEFKVTFIFADEPLKSVEATYLKLYALSQAKVEIRSINLNGAFGALPNVAWS 209 Query: 177 GDTPMDAEEVEQSLMSAAFGDGSFAPHMVDKFPLYVHRINSLKMGVRITDQHKVRLGAYL 236 P++ + + + + + VDKFP ++ I RI D KVR GA L Sbjct: 210 NGKPLELDYLREFEIELKLANEYPHIEFVDKFPRFLQHIIPAD-NTRILDTSKVRFGAQL 268 Query: 237 GEGTTLMPGASYINFNAGTEGASMVEGRISSSVLVGAGTDIGGGASTLGVLSGGNNVFIS 296 GTT+MPGASY+NFNAGT GA MVEGRISSS +VGAG+DIGGGAS LGVLSG + I+ Sbjct: 269 AAGTTVMPGASYVNFNAGTTGAVMVEGRISSSAVVGAGSDIGGGASILGVLSGTDGNPIT 328 Query: 297 LGRNCLLEVNSALGIPVGDAVIVAAETAVMASSRVSVQ----IEGHPLNGKV-----VKA 347 +G+N LL NS GIP+GD I+ AV A ++ + IE +N +K Sbjct: 329 IGKNTLLGANSTCGIPLGDGCIIDGGLAVFAGTKFHINDAELIELKKVNPNTKFDNYMKG 388 Query: 348 AELAGINAATFRRNDVTGALEVLRTGRNIDFAKKLEDGEDILNSDLH 394 ELAG++ FR+N + G V R+ R I LN+DLH Sbjct: 389 WELAGLHGLHFRQNSLNGQYVVQRSTREIK-----------LNTDLH 424 >sp|Q30RL0|DAPD_SULDN RecName: Full=2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; AltName: Full=Tetrahydrodipicolinate N-succinyltransferase; Short=THDP succinyltransferase; Short=THP succinyltransferase; AltName: Full=Tetrahydropicolinate succinylase Length = 398 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 162/407 (39%), Positives = 212/407 (52%), Gaps = 37/407 (9%) Query: 11 TVDAFKQVVEDFKASA-GYKEPLLFAVGSRVFTGNGTLASV---RYPVVNGPGQNTASAA 66 T +AFK +V+D K S GYKEPL F V RV G L YPV+N +N SAA Sbjct: 6 TTEAFKALVQDIKTSINGYKEPLAFGV-CRVDMGQLNLEKTLQATYPVINW-NENFGSAA 63 Query: 67 IWMKVL---GVTPAGVQN---ITVSAAQLTEILAYFAPFKND--GKYHGNVIALEQALE- 117 I++K L GV Q+ ++ A L L F+P+ + G H N+ + Sbjct: 64 IFIKALQEQGVEIDFTQSEVICNINKAFLKSCLNAFSPYSEEAYGDAHKNIQVISALYNQ 123 Query: 118 -ATKAGPANRVVITFIFDDIDPQGVEDSTLKLYGLSHRCFKPNQLNLTKVFTKLPNVAWI 176 AT +TFIF D + VE + LKLY LS + +NL F LPNVAW Sbjct: 124 IATSGSKDGEFKVTFIFADEPLKSVEATYLKLYALSQAKVEIRSINLNGAFGALPNVAWS 183 Query: 177 GDTPMDAEEVEQSLMSAAFGDGSFAPHMVDKFPLYVHRINSLKMGVRITDQHKVRLGAYL 236 P++ + + + + + VDKFP ++ I RI D KVR GA L Sbjct: 184 NGKPLELDYLREFEIELKLANEYPHIEFVDKFPRFLQHIIPAD-NTRILDTSKVRFGAQL 242 Query: 237 GEGTTLMPGASYINFNAGTEGASMVEGRISSSVLVGAGTDIGGGASTLGVLSGGNNVFIS 296 GTT+MPGASY+NFNAGT GA MVEGRISSS +VGAG+DIGGGAS LGVLSG + I+ Sbjct: 243 AAGTTVMPGASYVNFNAGTTGAVMVEGRISSSAVVGAGSDIGGGASILGVLSGTDGNPIT 302 Query: 297 LGRNCLLEVNSALGIPVGDAVIVAAETAVMASSRVSVQ----IEGHPLNGKV-----VKA 347 +G+N LL NS GIP+GD I+ AV A ++ + IE +N +K Sbjct: 303 IGKNTLLGANSTCGIPLGDGCIIDGGLAVFAGTKFHINDAELIELKKVNPNTKFDNYMKG 362 Query: 348 AELAGINAATFRRNDVTGALEVLRTGRNIDFAKKLEDGEDILNSDLH 394 ELAG++ FR+N + G V R+ R I LN+DLH Sbjct: 363 WELAGLHGLHFRQNSLNGQYVVQRSTREIK-----------LNTDLH 398 >ref|YP_001358895.1| tetrahydrodipicolinate N-succinyltransferase [Sulfurovum sp. NBC37-1] sp|A6QAM9|DAPD_SULNB RecName: Full=2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; AltName: Full=Tetrahydrodipicolinate N-succinyltransferase; Short=THDP succinyltransferase; Short=THP succinyltransferase; AltName: Full=Tetrahydropicolinate succinylase dbj|BAF72538.1| tetrahydrodipicolinate N-succinyltransferase [Sulfurovum sp. NBC37-1] Length = 397 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 152/407 (37%), Positives = 221/407 (54%), Gaps = 38/407 (9%) Query: 10 ATVDAFKQVVEDFKASAGYKEPLLFAVGSRVFTGNGTLASV---RYPVVNGPGQNTASAA 66 A+ DAFK +V + A GY+EP+ F + +RV G V +P++N +N SAA Sbjct: 7 ASTDAFKVLVAEVTAQEGYREPMAFGI-ARVDRGQKNAEKVLQANFPLINWK-ENFGSAA 64 Query: 67 IWMKVL-----GVTPAGVQNI-TVSAAQLTEILAYFAPF--KNDGKYHGNVIALEQALEA 118 +++K L V +G + + T++ + +A FAP+ + G H NV ++ + Sbjct: 65 VFIKALQEAKCDVDFSGSEFVATINDNFVANAMAAFAPYLAEATGDSHKNVQVIKTLAKM 124 Query: 119 TKAGPANRVVITFIFDDIDPQGVEDSTLKLYGLSHRCFKPNQLNLTKVFTKLPNVAWIGD 178 G R+V F+F+D +P+ VE LKLY LS R + ++NL F L NVAW+G+ Sbjct: 125 EDIGKNFRIV--FLFEDANPESVEAVYLKLYALSLRKAELRKVNLNGAFGILSNVAWVGN 182 Query: 179 TPMDAEEVEQSLMSAAFGDGSFAPHMVDKFPLYVHRINSLKMGVRITDQHKVRLGAYLGE 238 TP + + + ++ + VDKFP ++ + RI + KVR+GA L Sbjct: 183 TPYELDYLRENEIEMKLNGTYPTVDSVDKFPRFLQHVIP-DDNTRILEASKVRMGAQLAA 241 Query: 239 GTTLMPGASYINFNAGTEGASMVEGRISSSVLVGAGTDIGGGASTLGVLSGGNNVFISLG 298 GTT+MPGASYINFNAGT G MVEGRISSS +VGAG+D+GGGAS LGVLSG + IS+G Sbjct: 242 GTTVMPGASYINFNAGTLGPVMVEGRISSSAIVGAGSDVGGGASILGVLSGTDGNPISIG 301 Query: 299 RNCLLEVNSALGIPVGDAVIVAAETAVMASSRVSVQIE-------GHP----LNGKVVKA 347 N LL NS G+P+GD IV A ++A +++ + E +P N K Sbjct: 302 ENTLLGANSVTGLPLGDGCIVDAGITILAGTKIKIAPEELEKIKAANPDAKLDNKTTFKG 361 Query: 348 AELAGINAATFRRNDVTGALEVLRTGRNIDFAKKLEDGEDILNSDLH 394 EL G+N +R+N +TG + R+ R + LN DLH Sbjct: 362 EELQGLNGIHYRQNSLTGEIIARRSTREVK-----------LNEDLH 397 >ref|ZP_05625262.1| 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase DapD [Campylobacter gracilis RM3268] gb|EEV17738.1| 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase DapD [Campylobacter gracilis RM3268] Length = 398 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 147/397 (37%), Positives = 218/397 (54%), Gaps = 31/397 (7%) Query: 11 TVDAFKQVVEDFKASAGYKEPLLFAVGSRVFTGNG---TLASVRYPVVNGPGQNTASAAI 67 T++ ++++ +A+ GY++P+++A+G RVF G SV Y VN SAA+ Sbjct: 7 TIEELNELIQGVRAAKGYRDPIMWAIG-RVFKGRAEGHKSLSVNYAYVNFK-DGLVSAAV 64 Query: 68 WMKVLG-----VTPAGVQNIT----VSAAQLTEILAYFAPFKNDGKYHGNVIALEQALEA 118 + L V +G + + + + E L + P +G H N+ L EA Sbjct: 65 LIHALAECGEVVDFSGSECVLPLTHKALKKAIEALKFLQPDAKEGA-HKNLQVLLAVKEA 123 Query: 119 TKAGPANRVVITFIFDDIDPQGVEDSTLKLYGLSHRCFKPNQLNLTKVFTKLPNVAWIGD 178 K+ +FIF+D P+ VE LKLY LS +P LNL F+ LPNVAW + Sbjct: 124 MKSDEHASFCTSFIFEDAAPKSVESVYLKLYALSLNLCEPRTLNLDGAFSVLPNVAWDEN 183 Query: 179 T-PMDAEEVEQSLMSAAFGDGSFAPHM--VDKFPLYVHRINSLKMGVRITDQHKVRLGAY 235 P++ + ++ +S G + P + VDKFP Y+ + VRI D KVRLGA+ Sbjct: 184 ARPIELWWLRENEISLKM-QGRY-PRIISVDKFPRYLSHVVP-PQNVRILDDAKVRLGAH 240 Query: 236 LGEGTTLMPGASYINFNAGTEGASMVEGRISSSVLVGAGTDIGGGASTLGVLSGGNNVFI 295 + GTT+MPGA+Y+NFNAGT G+ M+EGR+SSSV+VG G+DIGGGAS LGVLSG N + Sbjct: 241 IAAGTTVMPGAAYVNFNAGTTGSVMIEGRVSSSVVVGEGSDIGGGASILGVLSGTNGNAV 300 Query: 296 SLGRNCLLEVNSALGIPVGDAVIVAAETAVMASSRVSVQIE----------GHPLNGKVV 345 S+G++CLL NS GIP+GD IV A AV+ ++V + + G + ++ Sbjct: 301 SIGKHCLLGANSVTGIPLGDRCIVDAGIAVLEGTKVFIAQKDREVLAALNAGFAFDREIY 360 Query: 346 KAAELAGINAATFRRNDVTGALEVLRTGRNIDFAKKL 382 K ELAG++ FR+N +G + + R I +L Sbjct: 361 KGLELAGLSGLHFRQNSQSGQITASVSKRAIKLNAEL 397 >dbj|BAK71015.1| 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase DapD [Arcobacter butzleri ED-1] Length = 395 Score = 216 bits (549), Expect = 8e-54, Method: Composition-based stats. Identities = 150/406 (36%), Positives = 212/406 (52%), Gaps = 36/406 (8%) Query: 11 TVDAFKQVVEDFKASAGYKEPLLFAVGSRVFTGN---GTLASVRYPVVNGPGQNTASAAI 67 T D FKQ+VED +A + YK P+ F + +RV G + +PV+N +N SAAI Sbjct: 4 TKDEFKQLVEDIQAQSWYKNPIGFGI-ARVDRGQLNKDKILQATFPVINW-NENFGSAAI 61 Query: 68 WMKVLGVTPAGVQN------ITVSAAQLTEILAYFAPF--KNDGKYHGNV--IALEQALE 117 ++ L V V +S LT + F PF + G+ H NV I+ +L Sbjct: 62 FLNALKVAGENVDTSKSELICKISDEFLTSCIEAFRPFIPEAKGEAHKNVQVISTLASLP 121 Query: 118 ATKAGPANRVVITFIFDDIDPQGVEDSTLKLYGLSHRCFKPNQLNLTKVFTKLPNVAWIG 177 A+ + FIF+D P+ E LKLY LS K LNL F KL N AWIG Sbjct: 122 IDSGLTADDYRVVFIFEDTAPESTESVYLKLYALSTGKAKLRSLNLNGAFGKLHNCAWIG 181 Query: 178 DTPMDAEEVEQSLMSAAFGDGSFAPHMVDKFPLYVHRINSLKMGVRITDQHKVRLGAYLG 237 + P++ + + + + G VDKFP ++ + RI + KVR+GA L Sbjct: 182 NQPIELDWLRANEIVLKIGAKYPNIDFVDKFPRFLQHVIPAD-NTRILETSKVRMGAQLA 240 Query: 238 EGTTLMPGASYINFNAGTEGASMVEGRISSSVLVGAGTDIGGGASTLGVLSGGNNVFISL 297 GTT+MPGA+YINFNAGT G+ MVEGRISSS +VGAG+D+GGGAS LGVLSG + V +++ Sbjct: 241 AGTTVMPGAAYINFNAGTLGSVMVEGRISSSAVVGAGSDVGGGASILGVLSGTDGVPVTI 300 Query: 298 GRNCLLEVNSALGIPVGDAVIVAAETAVMASSRVSVQIEG----HPLN-----GKVVKAA 348 G N LL NS G +GD I+ A ++ +++++ + +N V+K + Sbjct: 301 GENTLLGANSCTGTTIGDGCILDAGVTILPGTKIALSDKAVEQLKAINPGKEISNVMKGS 360 Query: 349 ELAGINAATFRRNDVTGALEVLRTGRNIDFAKKLEDGEDILNSDLH 394 + G+N FR N TG +R+ R I LN+DLH Sbjct: 361 DFIGVNGVHFRVNSSTGQTIAMRSTREIK-----------LNADLH 395