BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4367.p (217 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776880.1| hypothetical protein Hsero_3493 [Herbaspiril... 363 1e-98 ref|ZP_08505876.1| hypothetical protein METUNv1_02948 [Methylove... 112 3e-23 ref|YP_001789945.1| hypothetical protein Lcho_0908 [Leptothrix c... 108 5e-22 ref|YP_001019601.1| hypothetical protein Mpe_A0404 [Methylibium ... 85 7e-15 ref|YP_912627.1| hypothetical protein Cpha266_2202 [Chlorobium p... 67 1e-09 >ref|YP_003776880.1| hypothetical protein Hsero_3493 [Herbaspirillum seropedicae SmR1] gb|ADJ64972.1| hypothetical protein Hsero_3493 [Herbaspirillum seropedicae SmR1] Length = 217 Score = 363 bits (931), Expect = 1e-98, Method: Composition-based stats. Identities = 178/217 (82%), Positives = 189/217 (87%) Query: 1 MSHKSIFICLLAIFLTACAVSNVDRDFSLENNPDEGIVIVSVSFDRAGSRNFQAMFYLDE 60 MS+KS +CLLAI LT CAVSNVDR+FSL+NNPD+GIVI SVSFDR GSRNFQAMFYLDE Sbjct: 1 MSYKSAVLCLLAILLTGCAVSNVDRNFSLDNNPDQGIVIASVSFDRIGSRNFQAMFYLDE 60 Query: 61 GIPGAPVPPRRLEALPEYATIRMGSQFKDSYGQVLAISLPAGRHTISSWRLVRNAGYILS 120 IPGAPVP RRLEAL E+ TIRMGSQFKDSYGQVLAISLPAGRHTISSWRLVR+AGY LS Sbjct: 61 DIPGAPVPARRLEALAEHVTIRMGSQFKDSYGQVLAISLPAGRHTISSWRLVRSAGYTLS 120 Query: 121 PSAKMAPLEFHVAAGKVQYIGNLHLNLAEGKNILGLTVVADASPEIRDRQDQDLPIIKKK 180 PS KM PLEF V AGKVQYIGNLHLNLAEG N+LGL V+ADASPEIRDRQD+DL II+KK Sbjct: 121 PSEKMVPLEFQVEAGKVQYIGNLHLNLAEGNNVLGLPVIADASPEIRDRQDRDLAIIRKK 180 Query: 181 YPQFADRTEIRLLPLGTWGGGGAANREIQPIVIVPVK 217 YPQFA RTEIRLLPLGTW G R IQP V VPVK Sbjct: 181 YPQFAGRTEIRLLPLGTWEGDRTTRRVIQPAVTVPVK 217 >ref|ZP_08505876.1| hypothetical protein METUNv1_02948 [Methyloversatilis universalis FAM5] gb|EGK70727.1| hypothetical protein METUNv1_02948 [Methyloversatilis universalis FAM5] Length = 214 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 103/212 (48%), Gaps = 9/212 (4%) Query: 7 FICLLAIF--LTACAVSNVDRDFSLENNPDEGIVIVSVSFDRAGSRNFQAMFYLDEGIP- 63 F LL + L CA V +DF E NP G+V+ SV+ D G + + YLD G Sbjct: 7 FPVLLGVLAALAGCAAPQVAKDFKPEANPKVGVVVFSVAHDVEGGDANKTIVYLDGGFTS 66 Query: 64 -GAPVPPRRLEALPEYATIRMGSQFKDSYGQVLAISLPAGRHTISSWRLVRNAGYILSPS 122 GA A+ +R + F D G + + + G H + W++ +G + P Sbjct: 67 GGAHFGSANGTAV----VLRRPNDFSDVQGYLHVVEMAPGPHRFTHWQISNGSGLRIFPR 122 Query: 123 AKMAPLEFHVAAGKVQYIGNLHLNLAEGKNILGLTVVADASPEIRDRQDQDLPIIKKKYP 182 ++ PLEF V AG+V Y+G H +L GKN+ G+ + + D D+DL +++++YP Sbjct: 123 GELPPLEFEVRAGEVIYVGAFHGHLLRGKNLFGIEITGGGHVGVVDAADRDLALLRQRYP 182 Query: 183 QFADRTEIRLLPLGTWGGGGAANREIQPIVIV 214 QF R PLG W G R + P+ +V Sbjct: 183 QFEGRVRSSAFPLGPWSAEGVTPR-LDPMPLV 213 >ref|YP_001789945.1| hypothetical protein Lcho_0908 [Leptothrix cholodnii SP-6] gb|ACB33180.1| conserved hypothetical protein [Leptothrix cholodnii SP-6] Length = 219 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 8/188 (4%) Query: 17 ACAVSNVDRDFSLENNPDEGIVIVSVSFDRAGSRNFQAMFYLD-EGIPGAPVPPRRLEAL 75 CA N+ DFS + P G+++ SV+ + + + + Y D G PG E+L Sbjct: 18 GCAAGNIPPDFSFGDKPAVGVIVASVAQNESANPGARTQIYFDTHGRPGMNRLQSSGESL 77 Query: 76 PEYATI--RMGSQFKDSYGQVLAISLPAGRHTISSWRLVRNAGYILSPSAKMAPLEFHVA 133 E R+ GQ++ + +PAGRHT+ +W++ G + P+ + PL F V Sbjct: 78 DEATEPLPRLAGG-----GQLVVLKVPAGRHTLDAWQMRDGVGGWVQPAGVLKPLAFTVV 132 Query: 134 AGKVQYIGNLHLNLAEGKNILGLTVVADASPEIRDRQDQDLPIIKKKYPQFADRTEIRLL 193 AG+V+YIG+L LA KN LGL VV A+ EI+D++ +D+ + YPQF + I LL Sbjct: 133 AGEVRYIGSLEGTLAMRKNALGLRVVDSAAVEIKDQRARDIAAFEAAYPQFKGQVVIDLL 192 Query: 194 PLGTWGGG 201 P G W Sbjct: 193 PTGPWAAA 200 >ref|YP_001019601.1| hypothetical protein Mpe_A0404 [Methylibium petroleiphilum PM1] gb|ABM93366.1| hypothetical protein Mpe_A0404 [Methylibium petroleiphilum PM1] Length = 216 Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 12/219 (5%) Query: 1 MSHKSIFICLLAIFLTACAVSNVDRDFSLENNPDEGIVIVSVSFD---RAGSRNFQAMFY 57 + K I L FL C + V R+ + ++ ++IVSVS D RAG+ A+ + Sbjct: 2 IRRKLIIATGLLSFLVGCG-TPVSRNTTPAALAEKAVIIVSVSHDVEFRAGA---NAIVH 57 Query: 58 LDEGIPGAPVPPRRLEALPEYATIRMGSQFKDSYGQVLAISLPAGRHTISSWRLVRNAGY 117 +D V L+++ E + + S F D G + + + G H + W++V + G Sbjct: 58 MDAESMSTQV---LLKSVQEGLVVPVASDFSDRRGHLYVLEVEPGPHRFNGWQVV-SGGM 113 Query: 118 ILSPSAKMAPLEFHVAAGKVQYIGNLHLNLAEGKNILGLTVVADASPEIRDRQDQDLPII 177 + + L F V G V Y+GN+H L +G +LG P + DR DQD+P+ Sbjct: 114 RIVRKEPVGDLTFDVKKGDVLYLGNIHSRLEDGHWVLGGRSARSGVPVVVDRSDQDIPLA 173 Query: 178 KKKYPQFADRTEIRLLPLGTWGGGGAAN-REIQPIVIVP 215 + K P A + + +LP+G W + + R + PIV+ P Sbjct: 174 EAKIPALAGKVQSAVLPVGLWARSLSNDARSVAPIVVPP 212 >ref|YP_912627.1| hypothetical protein Cpha266_2202 [Chlorobium phaeobacteroides DSM 266] gb|ABL66203.1| hypothetical protein Cpha266_2202 [Chlorobium phaeobacteroides DSM 266] Length = 185 Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 6/109 (5%) Query: 88 KDSYGQVLAISLPAGRHTISSWRLVRNAGYILS---PSAKMAPLEFHVAAGKVQYIGNLH 144 K G ++A+ L G + + +W L G + P+ PL+F ++ G++ YIG+LH Sbjct: 67 KSRDGSLIALPLKPGSYELCNWGLYIATGVSFTDIHPAKPPVPLKFTISPGEITYIGDLH 126 Query: 145 LNLAEGKNILGLTVVADASPEIRDRQDQDLPIIKKKYPQFAD---RTEI 190 + GKN+LG+++ +P I D DL +++KKYP D RT I Sbjct: 127 IEPIMGKNLLGISIPGGGNPGISDNSAVDLQLLRKKYPNLQDWPVRTNI 175