BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4354.p (281 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777724.1| oxidoreductase [Herbaspirillum seropedicae S... 330 1e-88 ref|YP_971681.1| short chain dehydrogenase [Acidovorax citrulli ... 330 2e-88 ref|ZP_06487404.1| short chain dehydrogenase [Xanthomonas campes... 313 3e-83 ref|YP_001585134.1| short chain dehydrogenase [Burkholderia mult... 244 1e-62 ref|YP_004663045.1| short chain dehydrogenase [Myxococcus fulvus... 243 3e-62 >ref|YP_003777724.1| oxidoreductase [Herbaspirillum seropedicae SmR1] gb|ADJ65816.1| oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 260 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 189/207 (91%), Positives = 195/207 (94%) Query: 1 MSFDLYLSGLRAVVTGGTQGLGAAVVRTLAQAGARVATSARSLPQHPAEGVTYVAADLST 60 MSFDL+L+GLRAVVTGGTQGLGAAVV+TLAQAGARVATSARSLP EGVTYVAADLST Sbjct: 1 MSFDLHLNGLRAVVTGGTQGLGAAVVKTLAQAGARVATSARSLPLQSVEGVTYVAADLST 60 Query: 61 AEGTRHFSETVLKQWGGVDILINVLGGSKTPGGGFAAISDEHWFAELNLNLMPAVRMDRA 120 AEGTRHFS+TVLK WGGVDILIN LGGSKTPGGGFAAISDEHWFAE NLNLMPAVRMDRA Sbjct: 61 AEGTRHFSQTVLKDWGGVDILINALGGSKTPGGGFAAISDEHWFAEFNLNLMPAVRMDRA 120 Query: 121 LLPGMLDQGSGVIIHVSSIQRVLPLPESTTAYAAAKAALSTYSKALAREVTPKGVRVLSV 180 LLP ML QGSGVIIHVSSIQRVLPLPESTTAYAAAKAAL+TYSK+LAREVT KGVRVLSV Sbjct: 121 LLPNMLAQGSGVIIHVSSIQRVLPLPESTTAYAAAKAALTTYSKSLAREVTSKGVRVLSV 180 Query: 181 APGWIETEASVAFAQRTAAHAGTDYEA 207 APGWIETEASVAF QRTAAHAGTDYE Sbjct: 181 APGWIETEASVAFTQRTAAHAGTDYEG 207 >ref|YP_971681.1| short chain dehydrogenase [Acidovorax citrulli AAC00-1] gb|ABM33907.1| short-chain dehydrogenase/reductase SDR [Acidovorax citrulli AAC00-1] Length = 260 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 176/207 (85%), Positives = 192/207 (92%) Query: 1 MSFDLYLSGLRAVVTGGTQGLGAAVVRTLAQAGARVATSARSLPQHPAEGVTYVAADLST 60 MSFDL+L GLRAVVTGGT GLGAAVV+TLA+AGARVATSAR++P P EGVTYVAADLST Sbjct: 1 MSFDLHLKGLRAVVTGGTLGLGAAVVKTLAEAGARVATSARTVPAQPVEGVTYVAADLST 60 Query: 61 AEGTRHFSETVLKQWGGVDILINVLGGSKTPGGGFAAISDEHWFAELNLNLMPAVRMDRA 120 AEGT H + T+L+ WGG+DIL+NVLGGSKTPGGGFAAISDEHWFAE+NLNLMPAVR+DRA Sbjct: 61 AEGTGHLARTILQNWGGIDILVNVLGGSKTPGGGFAAISDEHWFAEMNLNLMPAVRLDRA 120 Query: 121 LLPGMLDQGSGVIIHVSSIQRVLPLPESTTAYAAAKAALSTYSKALAREVTPKGVRVLSV 180 LLP ML QGSGV+IHVSSIQRVLPLPESTTAYAAAK AL+TYSK+LAREVTPKGVRVLSV Sbjct: 121 LLPAMLAQGSGVVIHVSSIQRVLPLPESTTAYAAAKGALTTYSKSLAREVTPKGVRVLSV 180 Query: 181 APGWIETEASVAFAQRTAAHAGTDYEA 207 APGWIETEASVAFA+R AA AGTDYE Sbjct: 181 APGWIETEASVAFAERMAADAGTDYEG 207 >ref|ZP_06487404.1| short chain dehydrogenase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 260 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 169/207 (81%), Positives = 183/207 (88%) Query: 1 MSFDLYLSGLRAVVTGGTQGLGAAVVRTLAQAGARVATSARSLPQHPAEGVTYVAADLST 60 MSFDL L+GLRAVVTGGT GLGAAVV L +A ARVATSAR+LP P GV YVAADLST Sbjct: 1 MSFDLQLTGLRAVVTGGTLGLGAAVVNFLVEADARVATSARTLPAQPVAGVMYVAADLST 60 Query: 61 AEGTRHFSETVLKQWGGVDILINVLGGSKTPGGGFAAISDEHWFAELNLNLMPAVRMDRA 120 AEGT+ ++TVL++WGGVDILINVLGGS TPGGGFAAISD HWFAELNLNLMPAVR+DRA Sbjct: 61 AEGTQQLAQTVLQEWGGVDILINVLGGSNTPGGGFAAISDAHWFAELNLNLMPAVRLDRA 120 Query: 121 LLPGMLDQGSGVIIHVSSIQRVLPLPESTTAYAAAKAALSTYSKALAREVTPKGVRVLSV 180 LLP ML QGSGV+IHVSSIQRVLPL ESTTAYAAAK AL+TYSK+LAREVTP+GVRVLSV Sbjct: 121 LLPTMLVQGSGVVIHVSSIQRVLPLSESTTAYAAAKGALTTYSKSLAREVTPQGVRVLSV 180 Query: 181 APGWIETEASVAFAQRTAAHAGTDYEA 207 APGWIETEASV FAQR +AGTDYE Sbjct: 181 APGWIETEASVTFAQRMGENAGTDYEG 207 >ref|YP_001585134.1| short chain dehydrogenase [Burkholderia multivorans ATCC 17616] ref|YP_001947755.1| short chain dehydrogenase [Burkholderia multivorans ATCC 17616] gb|ABX18842.1| short-chain dehydrogenase/reductase SDR [Burkholderia multivorans ATCC 17616] dbj|BAG45219.1| putative short-chain alcohol dehydrogenase [Burkholderia multivorans ATCC 17616] Length = 259 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 140/207 (67%), Positives = 168/207 (81%), Gaps = 1/207 (0%) Query: 1 MSFDLYLSGLRAVVTGGTQGLGAAVVRTLAQAGARVATSARSLPQHPAEGVTYVAADLST 60 MSFDL L G R +VTGGT+G+GAAVV +AGARV +AR++P + GV YVAAD++T Sbjct: 1 MSFDLELEGRRVLVTGGTKGVGAAVVSAFVEAGARVVATARTVPAD-SPGVHYVAADVTT 59 Query: 61 AEGTRHFSETVLKQWGGVDILINVLGGSKTPGGGFAAISDEHWFAELNLNLMPAVRMDRA 120 A G + VL + GG+DI++NVLGGS P GGFAA+SD+ W EL+LNLMPAVR+DRA Sbjct: 60 AAGCALVASEVLTRLGGIDIVVNVLGGSSAPAGGFAALSDDEWEKELSLNLMPAVRLDRA 119 Query: 121 LLPGMLDQGSGVIIHVSSIQRVLPLPESTTAYAAAKAALSTYSKALAREVTPKGVRVLSV 180 LLP ML QGSGVI+HV+SIQ VLPLPESTTAYAAAKAALSTYSKAL++EVTPKGVRV+ V Sbjct: 120 LLPSMLAQGSGVIVHVTSIQHVLPLPESTTAYAAAKAALSTYSKALSKEVTPKGVRVVRV 179 Query: 181 APGWIETEASVAFAQRTAAHAGTDYEA 207 +PGW+ETEA+V A+R AA AGTDYE Sbjct: 180 SPGWVETEAAVRLAERLAAEAGTDYEG 206 >ref|YP_004663045.1| short chain dehydrogenase [Myxococcus fulvus HW-1] gb|AEI61967.1| short chain dehydrogenase [Myxococcus fulvus HW-1] Length = 259 Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 136/207 (65%), Positives = 164/207 (79%), Gaps = 1/207 (0%) Query: 1 MSFDLYLSGLRAVVTGGTQGLGAAVVRTLAQAGARVATSARSLPQHPAEGVTYVAADLST 60 MSF+L L RA+VTGGT+G+GAAVV L +AG +V +AR+ P +GV YVAAD++T Sbjct: 1 MSFNLELKNRRALVTGGTKGVGAAVVTALVEAGVKVVATARTAPSD-TQGVHYVAADVTT 59 Query: 61 AEGTRHFSETVLKQWGGVDILINVLGGSKTPGGGFAAISDEHWFAELNLNLMPAVRMDRA 120 EG + L+ GG+DIL+NVLGGS PGGGFAA+ ++ W ELNLNLMPAVR+DRA Sbjct: 60 IEGCARVARDALEHLGGIDILVNVLGGSSAPGGGFAALGEDAWQKELNLNLMPAVRLDRA 119 Query: 121 LLPGMLDQGSGVIIHVSSIQRVLPLPESTTAYAAAKAALSTYSKALAREVTPKGVRVLSV 180 LLP ML QG+GVI+HV+SIQR LPLPESTTAYAAAKAALSTYSKAL++EV PKGVRV+ V Sbjct: 120 LLPSMLAQGAGVIVHVTSIQRELPLPESTTAYAAAKAALSTYSKALSKEVAPKGVRVVRV 179 Query: 181 APGWIETEASVAFAQRTAAHAGTDYEA 207 +PGW+ETEASV A+R A AGTDYE Sbjct: 180 SPGWVETEASVHLAERLAEQAGTDYEG 206