BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4340.p         (182 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776852.1| transcription regulator protein [Herbaspiril...   323   5e-87
ref|YP_001352356.1| AsnC family transcriptional regulator [Janth...   288   2e-76
ref|YP_001099060.1| putative transcriptional regulator [Herminii...   283   1e-74
ref|YP_004751558.1| putative transcriptional regulator [Collimon...   281   3e-74
ref|ZP_08274998.1| putative transcriptional regulator (AsnC fami...   281   4e-74

>ref|YP_003776852.1| transcription regulator protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ64944.1| transcription regulator protein [Herbaspirillum seropedicae SmR1]
          Length = 170

 Score =  323 bits (829), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 166/170 (97%), Positives = 167/170 (98%)

Query: 13  MAAKLHTLDKVDRKLLNMLQKDNQISTRVLAEKLHISQPTCLRRIRELREAGIISAEVAM 72
           MAAK HTLDKVDRKLLNMLQKDNQISTRVLAEKLHISQPTCLRRIR+LREAGIISAEVAM
Sbjct: 1   MAAKHHTLDKVDRKLLNMLQKDNQISTRVLAEKLHISQPTCLRRIRDLREAGIISAEVAM 60

Query: 73  VDPFALGYGMLAFLEISLNNQSDQHMQDFEQRMAKEAEVMQCYFVSGEYDYFLAVHVIDM 132
           VDPFALGYGMLAFLEISLNNQSDQHMQDFEQRMAKEAEVMQCYFVSGEYDYFLAVHVIDM
Sbjct: 61  VDPFALGYGMLAFLEISLNNQSDQHMQDFEQRMAKEAEVMQCYFVSGEYDYFLAVHVIDM 120

Query: 133 DAYYQFVRRVISGSGNVRHFQSRFPMKRAKFTTRIAFDEKAVEVQVRVPG 182
           DAYYQFVRRVISGSGNVRHFQSRFPMKRAKFTTRIAFDEKA EV VRVPG
Sbjct: 121 DAYYQFVRRVISGSGNVRHFQSRFPMKRAKFTTRIAFDEKAAEVLVRVPG 170


>ref|YP_001352356.1| AsnC family transcriptional regulator [Janthinobacterium sp.
           Marseille]
 gb|ABR90223.1| transcriptional regulator, AsnC family [Janthinobacterium sp.
           Marseille]
          Length = 169

 Score =  288 bits (738), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 139/166 (83%), Positives = 155/166 (93%)

Query: 15  AKLHTLDKVDRKLLNMLQKDNQISTRVLAEKLHISQPTCLRRIRELREAGIISAEVAMVD 74
           +KLHTLDKVDRKLLN+LQKDNQ  TR LA+K+HISQPTCLRRIR++R+AGIISA+VAM+D
Sbjct: 2   SKLHTLDKVDRKLLNLLQKDNQTPTRTLADKVHISQPTCLRRIRDMRDAGIISADVAMID 61

Query: 75  PFALGYGMLAFLEISLNNQSDQHMQDFEQRMAKEAEVMQCYFVSGEYDYFLAVHVIDMDA 134
           PFALGYGMLAFLE+SL NQSD+HMQ+FE RM KEAEVMQCYFVSG+YDYFL VHV+DMDA
Sbjct: 62  PFALGYGMLAFLEVSLGNQSDEHMQEFEVRMGKEAEVMQCYFVSGDYDYFLVVHVVDMDA 121

Query: 135 YYQFVRRVISGSGNVRHFQSRFPMKRAKFTTRIAFDEKAVEVQVRV 180
           YYQFVRR ISGSGNVRHFQSRFPMKRAKF TRIAFDEK+  VQVR+
Sbjct: 122 YYQFVRRAISGSGNVRHFQSRFPMKRAKFDTRIAFDEKSAAVQVRI 167


>ref|YP_001099060.1| putative transcriptional regulator [Herminiimonas arsenicoxydans]
 emb|CAL60933.1| putative Bacterial regulatory proteins, AsnC/Lrp [Herminiimonas
           arsenicoxydans]
          Length = 169

 Score =  283 bits (723), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 136/166 (81%), Positives = 154/166 (92%)

Query: 15  AKLHTLDKVDRKLLNMLQKDNQISTRVLAEKLHISQPTCLRRIRELREAGIISAEVAMVD 74
           +KLHTLDKVDRKLLN+LQKDNQI TR+LA+K+HISQPTCLRRIR++R+AGIISA+VAM+D
Sbjct: 2   SKLHTLDKVDRKLLNLLQKDNQIPTRILADKVHISQPTCLRRIRDMRDAGIISADVAMID 61

Query: 75  PFALGYGMLAFLEISLNNQSDQHMQDFEQRMAKEAEVMQCYFVSGEYDYFLAVHVIDMDA 134
           PFALGYGMLAFLE+SL NQSD+HM +FE RM +E EVMQCYFVSG+YDYFL VHV+DMDA
Sbjct: 62  PFALGYGMLAFLEVSLANQSDEHMLEFETRMNREPEVMQCYFVSGDYDYFLVVHVVDMDA 121

Query: 135 YYQFVRRVISGSGNVRHFQSRFPMKRAKFTTRIAFDEKAVEVQVRV 180
           YYQFVRR ISGSGNVRHFQSRFPMKRAKF TRIA DEK  E+QVR+
Sbjct: 122 YYQFVRRAISGSGNVRHFQSRFPMKRAKFDTRIALDEKVSELQVRI 167


>ref|YP_004751558.1| putative transcriptional regulator [Collimonas fungivorans Ter331]
 gb|AEK60735.1| putative transcriptional regulator (AsnC familiy) [Collimonas
           fungivorans Ter331]
          Length = 169

 Score =  281 bits (719), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 137/166 (82%), Positives = 155/166 (93%)

Query: 15  AKLHTLDKVDRKLLNMLQKDNQISTRVLAEKLHISQPTCLRRIRELREAGIISAEVAMVD 74
           +K HTLDKVDRKLLN+LQ+DNQ+ TR LA+K HISQPTCLRR+R+LR+AGIISA+V++VD
Sbjct: 2   SKHHTLDKVDRKLLNLLQRDNQMPTRTLADKAHISQPTCLRRLRDLRDAGIISADVSLVD 61

Query: 75  PFALGYGMLAFLEISLNNQSDQHMQDFEQRMAKEAEVMQCYFVSGEYDYFLAVHVIDMDA 134
           PFALGYGMLAFLEISLN+QSD+HMQ+FE RM KEAEVMQCYFVSG+YDYFL VHVIDMDA
Sbjct: 62  PFALGYGMLAFLEISLNHQSDEHMQEFELRMNKEAEVMQCYFVSGDYDYFLVVHVIDMDA 121

Query: 135 YYQFVRRVISGSGNVRHFQSRFPMKRAKFTTRIAFDEKAVEVQVRV 180
           YYQFVRRVISGSGNVRHFQSRFPMKRAKF TR+AFDEK   V+VR+
Sbjct: 122 YYQFVRRVISGSGNVRHFQSRFPMKRAKFVTRVAFDEKPATVEVRI 167


>ref|ZP_08274998.1| putative transcriptional regulator (AsnC familiy) [Oxalobacteraceae
           bacterium IMCC9480]
 gb|EGF31520.1| putative transcriptional regulator (AsnC familiy) [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 169

 Score =  281 bits (718), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 136/164 (82%), Positives = 151/164 (92%)

Query: 16  KLHTLDKVDRKLLNMLQKDNQISTRVLAEKLHISQPTCLRRIRELREAGIISAEVAMVDP 75
           K++ LDKVDRKLLN+LQKDNQ  TR LAEK HISQPTCLRR+R+LR AGII+A+VA+VDP
Sbjct: 3   KIYALDKVDRKLLNLLQKDNQTPTRTLAEKTHISQPTCLRRLRDLRAAGIINADVALVDP 62

Query: 76  FALGYGMLAFLEISLNNQSDQHMQDFEQRMAKEAEVMQCYFVSGEYDYFLAVHVIDMDAY 135
           FALGYGMLAFLEISL NQSD+ MQ+FE RM KEAEVMQCYFVSG++DYFL  HVIDMDAY
Sbjct: 63  FALGYGMLAFLEISLTNQSDECMQEFETRMGKEAEVMQCYFVSGDFDYFLVAHVIDMDAY 122

Query: 136 YQFVRRVISGSGNVRHFQSRFPMKRAKFTTRIAFDEKAVEVQVR 179
           YQFVRRVISGSGNVRHFQSRFPMKR+KF TRIAFDEK++EVQVR
Sbjct: 123 YQFVRRVISGSGNVRHFQSRFPMKRSKFVTRIAFDEKSLEVQVR 166