BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4308.p (381 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776826.1| NADH:flavin oxidoreductase [Herbaspirillum s... 613 e-173 ref|ZP_07795100.1| putative FMN oxidoreductase [Pseudomonas aeru... 524 e-146 ref|ZP_01367155.1| hypothetical protein PaerPA_01004306 [Pseudom... 523 e-146 ref|YP_789441.1| putative FMN oxidoreductase [Pseudomonas aerugi... 523 e-146 dbj|GAA15746.1| probable FMN oxidoreductase [Pseudomonas aerugin... 522 e-146 >ref|YP_003776826.1| NADH:flavin oxidoreductase [Herbaspirillum seropedicae SmR1] gb|ADJ64918.1| NADH:flavin oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 372 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 320/372 (86%), Positives = 343/372 (92%) Query: 10 MSSQLFSPLTLRGVTLPNRIAVSPMCQYSAEDGFVNDWHLVHLGSRAVGGAGLVIMEATA 69 MSS LFSPL LRGVTLPNRIAVSPMCQYSAEDGFVNDWHLVHLGSRAVGGAGLV+MEATA Sbjct: 1 MSSHLFSPLPLRGVTLPNRIAVSPMCQYSAEDGFVNDWHLVHLGSRAVGGAGLVLMEATA 60 Query: 70 VVPEGRITSADLGIWKDEHVAPLRRITRFIEQQGAVPGIQLAHAGRKASALRPWDGPAGS 129 VV EGRI+SADLGIWKDEH+APLRRITRFIEQQGAVPGIQLAHAGRK+S LRPWDGPAGS Sbjct: 61 VVAEGRISSADLGIWKDEHIAPLRRITRFIEQQGAVPGIQLAHAGRKSSILRPWDGPAGS 120 Query: 130 VPVAEGGWLPQAPSALPFDTTYTEPHAMSAAEIAALVQAFADAARRALAAGFKVIELHGA 189 VP + GGW PQAPSALPFD Y+ P AMS +I ALVQAFADAA+RALAAGFKVIELHGA Sbjct: 121 VPPSAGGWTPQAPSALPFDDGYSTPQAMSVEQIGALVQAFADAAQRALAAGFKVIELHGA 180 Query: 190 HGYLGHQFLSPLSNKRTDQYGGSFENRIRFLLETVQATRAVWPAELPLLVRLSATDWTEG 249 HGYLGHQFLSPLSN+R+D+YGGSFENRIRFLLE +ATRAVWP ELPLLVRLSATDW +G Sbjct: 181 HGYLGHQFLSPLSNQRSDEYGGSFENRIRFLLEITRATRAVWPEELPLLVRLSATDWVDG 240 Query: 250 GWNADDTVALSARLRDMGVDLVDVSTGGNLPSAAIPVGPGYQTGFAARVKTETGIATGTV 309 GW ++TV LS RLR++GVDLVDVS+GGN P A IPVGPGYQT FAARVK E GIA+G V Sbjct: 241 GWTPEETVTLSQRLRELGVDLVDVSSGGNAPKAVIPVGPGYQTSFAARVKAEAGIASGAV 300 Query: 310 GMITEAIQAEHVLRTGQADLVLLARELLRDPYWPLHAAQQLREDVAWPPQYVRAASSKTP 369 GMIT+AIQAEH+LRTGQADLVLLARELLRDPYWPLHAAQQLRE+VAWPPQYVRAASSKTP Sbjct: 301 GMITDAIQAEHILRTGQADLVLLARELLRDPYWPLHAAQQLREEVAWPPQYVRAASSKTP 360 Query: 370 LRPDVQYGLKEQ 381 LRP+VQYGLKEQ Sbjct: 361 LRPEVQYGLKEQ 372 >ref|ZP_07795100.1| putative FMN oxidoreductase [Pseudomonas aeruginosa 39016] gb|EFQ40196.1| putative FMN oxidoreductase [Pseudomonas aeruginosa 39016] dbj|BAK91677.1| putative FMN oxidoreductase [Pseudomonas aeruginosa NCGM2.S1] Length = 368 Score = 524 bits (1349), Expect = e-146, Method: Composition-based stats. Identities = 264/365 (72%), Positives = 299/365 (81%), Gaps = 1/365 (0%) Query: 12 SQLFSPLTLRGVTLPNRIAVSPMCQYSAEDGFVNDWHLVHLGSRAVGGAGLVIMEATAVV 71 S LF PL+LR +TLPNRIAVSPMCQYSA++G NDWHLVHLGSRAVGGAGLVI+EATAV+ Sbjct: 2 SLLFEPLSLRQITLPNRIAVSPMCQYSAQEGLANDWHLVHLGSRAVGGAGLVIVEATAVL 61 Query: 72 PEGRITSADLGIWKDEHVAPLRRITRFIEQQGAVPGIQLAHAGRKASALRPWDGPAGSVP 131 PEGRIT+ DLGIW D HV PL RITRFIE QGAV G+QLAHAGRKAS RPW G GSVP Sbjct: 62 PEGRITADDLGIWSDAHVEPLHRITRFIESQGAVAGVQLAHAGRKASTWRPWLGKHGSVP 121 Query: 132 VAEGGWLPQAPSALPFDTTYTEPHAMSAAEIAALVQAFADAARRALAAGFKVIELHGAHG 191 + +GGW+P APSA+PFD +T P A+S A+I ALVQAF AA R+LAAGFKV E+H AHG Sbjct: 122 IGDGGWIPVAPSAIPFDPQHTTPEALSEAQIEALVQAFVRAAERSLAAGFKVAEVHAAHG 181 Query: 192 YLGHQFLSPLSNKRTDQYGGSFENRIRFLLETVQATRAVWPAELPLLVRLSATDWTEGGW 251 YL HQFLSPLSN+R DQYGG FENRIR LL+ A R WP ELPL VRLSATDW E GW Sbjct: 182 YLLHQFLSPLSNQRRDQYGGCFENRIRLLLQVTAAVRKAWPEELPLFVRLSATDWVEDGW 241 Query: 252 NADDTVALSARLRDMGVDLVDVSTGGNLPSAAIPVGPGYQTGFAARVKTETGIATGTVGM 311 N D+TV L+ RL+D+GVDL+DVS+GG +A IPVGPGYQT FA RVK E GIA+GTVGM Sbjct: 242 NPDETVELARRLKDLGVDLIDVSSGGTAANAEIPVGPGYQTEFAERVKKEAGIASGTVGM 301 Query: 312 ITEAIQAEHVLRTGQADLVLLARELLRDPYWPLHAAQQLR-EDVAWPPQYVRAASSKTPL 370 ITE +QAEH+LRTGQADL+LLARELLRDPYWPLHAA +LR E + WPPQY+RAA TP Sbjct: 302 ITEPVQAEHILRTGQADLILLARELLRDPYWPLHAADELRNEQMPWPPQYLRAAHRSTPP 361 Query: 371 RPDVQ 375 R ++ Sbjct: 362 RKSLE 366 >ref|ZP_01367155.1| hypothetical protein PaerPA_01004306 [Pseudomonas aeruginosa PACS2] ref|YP_002438865.1| putative FMN oxidoreductase [Pseudomonas aeruginosa LESB58] ref|ZP_04929956.1| hypothetical protein PACG_02636 [Pseudomonas aeruginosa C3719] gb|EAZ54075.1| hypothetical protein PACG_02636 [Pseudomonas aeruginosa C3719] emb|CAW25986.1| probable FMN oxidoreductase [Pseudomonas aeruginosa LESB58] gb|EGM19678.1| putative FMN oxidoreductase [Pseudomonas aeruginosa 138244] gb|AEO73710.1| putative FMN oxidoreductase [Pseudomonas aeruginosa M18] Length = 368 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 264/365 (72%), Positives = 299/365 (81%), Gaps = 1/365 (0%) Query: 12 SQLFSPLTLRGVTLPNRIAVSPMCQYSAEDGFVNDWHLVHLGSRAVGGAGLVIMEATAVV 71 S LF PL+LR +TLPNRIAVSPMCQYSA++G NDWHLVHLGSRAVGGAGLVI+EATAV+ Sbjct: 2 SLLFEPLSLRQITLPNRIAVSPMCQYSAQEGLANDWHLVHLGSRAVGGAGLVIVEATAVL 61 Query: 72 PEGRITSADLGIWKDEHVAPLRRITRFIEQQGAVPGIQLAHAGRKASALRPWDGPAGSVP 131 PEGRIT+ DLGIW D HV PL RITRFIE QGAV G+QLAHAGRKAS RPW G GSVP Sbjct: 62 PEGRITADDLGIWSDAHVEPLHRITRFIESQGAVAGVQLAHAGRKASTWRPWLGKHGSVP 121 Query: 132 VAEGGWLPQAPSALPFDTTYTEPHAMSAAEIAALVQAFADAARRALAAGFKVIELHGAHG 191 + +GGW+P APSA+PFD +T P A+S A+I ALVQAF AA R+LAAGFKV E+H AHG Sbjct: 122 IGDGGWIPVAPSAIPFDPQHTTPEALSEAQIEALVQAFVRAAERSLAAGFKVAEVHAAHG 181 Query: 192 YLGHQFLSPLSNKRTDQYGGSFENRIRFLLETVQATRAVWPAELPLLVRLSATDWTEGGW 251 YL HQFLSPLSN+R DQYGG FENRIR LL+ A R WP ELPL VRLSATDW E GW Sbjct: 182 YLLHQFLSPLSNQRRDQYGGCFENRIRLLLQVTAAVRKAWPQELPLFVRLSATDWVEDGW 241 Query: 252 NADDTVALSARLRDMGVDLVDVSTGGNLPSAAIPVGPGYQTGFAARVKTETGIATGTVGM 311 N D+TV L+ RL+D+GVDL+DVS+GG +A IPVGPGYQT FA RVK E GIA+GTVGM Sbjct: 242 NPDETVELARRLKDLGVDLIDVSSGGTAANAEIPVGPGYQTEFAERVKKEAGIASGTVGM 301 Query: 312 ITEAIQAEHVLRTGQADLVLLARELLRDPYWPLHAAQQLR-EDVAWPPQYVRAASSKTPL 370 ITE +QAEH+LRTGQADL+LLARELLRDPYWPLHAA +LR E + WPPQY+RAA TP Sbjct: 302 ITEPVQAEHILRTGQADLILLARELLRDPYWPLHAADELRNEQMPWPPQYLRAAHRSTPP 361 Query: 371 RPDVQ 375 R ++ Sbjct: 362 RKSLE 366 >ref|YP_789441.1| putative FMN oxidoreductase [Pseudomonas aeruginosa UCBPP-PA14] ref|ZP_06877244.1| putative FMN oxidoreductase [Pseudomonas aeruginosa PAb1] gb|ABJ12956.1| putative oxidoreductase, FAD/FMN-binding [Pseudomonas aeruginosa UCBPP-PA14] gb|EGM21526.1| putative FMN oxidoreductase [Pseudomonas aeruginosa 152504] Length = 368 Score = 523 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 263/365 (72%), Positives = 298/365 (81%), Gaps = 1/365 (0%) Query: 12 SQLFSPLTLRGVTLPNRIAVSPMCQYSAEDGFVNDWHLVHLGSRAVGGAGLVIMEATAVV 71 S LF PL+LR +TLPNRIAVSPMCQYSA++G NDWHLVHLGSRAVGGAGLVI+EATAV+ Sbjct: 2 SLLFEPLSLRQITLPNRIAVSPMCQYSAQEGLANDWHLVHLGSRAVGGAGLVIVEATAVL 61 Query: 72 PEGRITSADLGIWKDEHVAPLRRITRFIEQQGAVPGIQLAHAGRKASALRPWDGPAGSVP 131 PEGRIT+ DLGIW D HV PL RITRFIE QGAV G+QLAHAGRKAS RPW G GSVP Sbjct: 62 PEGRITADDLGIWSDAHVEPLHRITRFIESQGAVAGVQLAHAGRKASTWRPWLGKHGSVP 121 Query: 132 VAEGGWLPQAPSALPFDTTYTEPHAMSAAEIAALVQAFADAARRALAAGFKVIELHGAHG 191 + +GGW+P APSA+PFD +T P A+S A+I ALVQAF A R+LAAGFKV E+H AHG Sbjct: 122 IGQGGWIPVAPSAIPFDPQHTTPEALSEAQIEALVQAFVRATERSLAAGFKVAEVHAAHG 181 Query: 192 YLGHQFLSPLSNKRTDQYGGSFENRIRFLLETVQATRAVWPAELPLLVRLSATDWTEGGW 251 YL HQFLSPLSN+R DQYGG FENRIR LL+ A R WP ELPL VRLSATDW E GW Sbjct: 182 YLLHQFLSPLSNQRRDQYGGCFENRIRLLLQVTAAVRKAWPEELPLFVRLSATDWVEDGW 241 Query: 252 NADDTVALSARLRDMGVDLVDVSTGGNLPSAAIPVGPGYQTGFAARVKTETGIATGTVGM 311 N D+TV L+ RL+D+GVDL+DVS+GG +A IPVGPGYQT FA RVK E GIA+GTVGM Sbjct: 242 NPDETVELARRLKDLGVDLIDVSSGGTAANAEIPVGPGYQTEFAERVKKEAGIASGTVGM 301 Query: 312 ITEAIQAEHVLRTGQADLVLLARELLRDPYWPLHAAQQLR-EDVAWPPQYVRAASSKTPL 370 ITE +QAEH+LRTGQADL+LLARELLRDPYWPLHAA +LR E + WPPQY+RAA TP Sbjct: 302 ITEPVQAEHILRTGQADLILLARELLRDPYWPLHAADELRNEQMPWPPQYLRAAHRSTPP 361 Query: 371 RPDVQ 375 R ++ Sbjct: 362 RKSLE 366 >dbj|GAA15746.1| probable FMN oxidoreductase [Pseudomonas aeruginosa NCMG1179] Length = 368 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 263/365 (72%), Positives = 299/365 (81%), Gaps = 1/365 (0%) Query: 12 SQLFSPLTLRGVTLPNRIAVSPMCQYSAEDGFVNDWHLVHLGSRAVGGAGLVIMEATAVV 71 S LF PL+LR +TLPNRIAVSPMCQYSA++G NDWHLVHLGSRAVGGAGLVI+EATAV+ Sbjct: 2 SLLFEPLSLRQITLPNRIAVSPMCQYSAQEGLANDWHLVHLGSRAVGGAGLVIVEATAVL 61 Query: 72 PEGRITSADLGIWKDEHVAPLRRITRFIEQQGAVPGIQLAHAGRKASALRPWDGPAGSVP 131 PEGRIT+ DLGIW D HV PL RITRFIE QGAV G+QLAHAGRKAS RPW G GSVP Sbjct: 62 PEGRITADDLGIWSDAHVEPLHRITRFIESQGAVAGVQLAHAGRKASTWRPWLGKHGSVP 121 Query: 132 VAEGGWLPQAPSALPFDTTYTEPHAMSAAEIAALVQAFADAARRALAAGFKVIELHGAHG 191 +++GGW+P APSA+PFD +T P A+S A+I ALVQAF AA R+LAAGFKV E+H AHG Sbjct: 122 ISDGGWIPVAPSAIPFDPQHTTPEALSEAQIEALVQAFVRAAERSLAAGFKVAEVHAAHG 181 Query: 192 YLGHQFLSPLSNKRTDQYGGSFENRIRFLLETVQATRAVWPAELPLLVRLSATDWTEGGW 251 YL HQFLSPLSN+R DQYGG FENRIR LL+ A R WP ELPL VRLSATDW E GW Sbjct: 182 YLLHQFLSPLSNQRRDQYGGCFENRIRLLLQVTAAVRKAWPQELPLFVRLSATDWVEDGW 241 Query: 252 NADDTVALSARLRDMGVDLVDVSTGGNLPSAAIPVGPGYQTGFAARVKTETGIATGTVGM 311 N D+TV L+ L+D+GVDL+DVS+GG +A IPVGPGYQT FA RVK E GIA+GTVGM Sbjct: 242 NPDETVELARHLKDLGVDLIDVSSGGTAANAEIPVGPGYQTEFAERVKKEAGIASGTVGM 301 Query: 312 ITEAIQAEHVLRTGQADLVLLARELLRDPYWPLHAAQQLR-EDVAWPPQYVRAASSKTPL 370 ITE +QAEH+LRTGQADL+LLARELLRDPYWPLHAA +LR E + WPPQY+RAA TP Sbjct: 302 ITEPVQAEHILRTGQADLILLARELLRDPYWPLHAADELRNEQMPWPPQYLRAAHRSTPP 361 Query: 371 RPDVQ 375 R ++ Sbjct: 362 RKSLE 366