BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4306.p (191 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776824.1| hypothetical protein Hsero_3436 [Herbaspiril... 281 4e-74 ref|YP_004752173.1| ABC transporter ATP-binding protein [Collimo... 230 7e-59 ref|YP_001099366.1| hypothetical protein HEAR1060 [Herminiimonas... 216 1e-54 ref|YP_001565849.1| hypothetical protein Daci_4835 [Delftia acid... 211 4e-53 ref|YP_001352885.1| hypothetical protein mma_1195 [Janthinobacte... 210 8e-53 >ref|YP_003776824.1| hypothetical protein Hsero_3436 [Herbaspirillum seropedicae SmR1] gb|ADJ64916.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 322 Score = 281 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 138/191 (72%), Positives = 156/191 (81%), Gaps = 2/191 (1%) Query: 1 MLPLAMDFSATLALPETVDAQRRLFFYPGSSLGNFDPAQALDFLRRVRAALPAGPGEGGI 60 MLPL MDFS+TLALP V +RRLFFYPGSSLGNFD +AL FLRR+RAALP GG+ Sbjct: 134 MLPLGMDFSSTLALPAQVQRERRLFFYPGSSLGNFDRDEALVFLRRLRAALP--DAAGGV 191 Query: 61 LIGLDLVKDARFLEAAYDDAIGVTAAFNLNVLNHVNALAGTDFAPRDWRHVAFYNARQQR 120 L+GLDLVK + LEAAYDDA+GVTAAFNLN LNH+N L G DF RDWRH+AFY+ QQR Sbjct: 192 LLGLDLVKPSAVLEAAYDDALGVTAAFNLNALNHINGLLGADFNARDWRHLAFYDEAQQR 251 Query: 121 IEMHLEARRDLIVRWPGGRRTFHQGERIHTEYSHKFTEQDILGLLEEAGFGNCRMWFDER 180 +EMHLEARRDLIVRWPGGRRTF QGERIHTE SHKF +I LL +AGFG+C+MW D + Sbjct: 252 VEMHLEARRDLIVRWPGGRRTFRQGERIHTENSHKFRADEIADLLAQAGFGDCQMWCDPQ 311 Query: 181 RWFAVCHAQAR 191 RWFAVCHA+ R Sbjct: 312 RWFAVCHARPR 322 >ref|YP_004752173.1| ABC transporter ATP-binding protein [Collimonas fungivorans Ter331] gb|AEK61350.1| ABC transporter ATP-binding protein [Collimonas fungivorans Ter331] Length = 320 Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats. Identities = 114/191 (59%), Positives = 137/191 (71%), Gaps = 3/191 (1%) Query: 1 MLPLAMDFSATLALPETVDAQRRLFFYPGSSLGNFDPAQALDFLRRVRAALPAGPGEGGI 60 M L MDFSA L LP T+D R FFYPGSS+GNF P +AL FLRR+R A+ G+ Sbjct: 131 MTCLGMDFSAELELPPTLDMHHRQFFYPGSSIGNFAPLEALMFLRRIRKAMAGS--NSGL 188 Query: 61 LIGLDLVKDARFLEAAYDDAIGVTAAFNLNVLNHVNALAGTDFAPRDWRHVAFYNARQQR 120 LIG+DL+KD L+AAYDD++GVTAAFNLN+L+HVN L DF P DWRH AFYN+ Q R Sbjct: 189 LIGVDLIKDKAILDAAYDDSLGVTAAFNLNLLHHVNRLLDADFRPADWRHRAFYNSAQYR 248 Query: 121 IEMHLEARRDLIVRWP-GGRRTFHQGERIHTEYSHKFTEQDILGLLEEAGFGNCRMWFDE 179 +EMHLEARR+L V W GG R F +GERIHTE SHK+T + + +L+ AGFG + W D Sbjct: 249 VEMHLEARRELTVHWQDGGERRFARGERIHTESSHKYTRKGFIEMLQLAGFGAVQTWTDP 308 Query: 180 RRWFAVCHAQA 190 WF VCHAQA Sbjct: 309 DDWFMVCHAQA 319 >ref|YP_001099366.1| hypothetical protein HEAR1060 [Herminiimonas arsenicoxydans] emb|CAL61239.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 320 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 112/190 (58%), Positives = 136/190 (71%), Gaps = 1/190 (0%) Query: 1 MLPLAMDFSATLALPETVDAQRRLFFYPGSSLGNFDPAQALDFLRRVRAALPAGPG-EGG 59 M+ + MDFS L LP V + RLFFYPGSS+GNF P QAL FLRR++AA G GG Sbjct: 129 MVAVGMDFSTELVLPNGVREENRLFFYPGSSIGNFTPEQALAFLRRLQAACSQDEGGAGG 188 Query: 60 ILIGLDLVKDARFLEAAYDDAIGVTAAFNLNVLNHVNALAGTDFAPRDWRHVAFYNARQQ 119 +LIG+DL+K+ L+AAYDDA+GVTA+FNLN+L H+N L G DF R WRH F+N + Sbjct: 189 LLIGVDLLKEKSILDAAYDDALGVTASFNLNLLLHLNRLLGADFDVRAWRHCGFFNRKLS 248 Query: 120 RIEMHLEARRDLIVRWPGGRRTFHQGERIHTEYSHKFTEQDILGLLEEAGFGNCRMWFDE 179 RIEMHLEA VRW GG R F QGERIHTE S+K+T+QD + LL +AGF N R W D Sbjct: 249 RIEMHLEAVTKQTVRWAGGMRCFEQGERIHTENSYKYTQQDFINLLTQAGFNNVRCWSDP 308 Query: 180 RRWFAVCHAQ 189 ++WF VCHAQ Sbjct: 309 QQWFMVCHAQ 318 >ref|YP_001565849.1| hypothetical protein Daci_4835 [Delftia acidovorans SPH-1] gb|ABX37464.1| conserved hypothetical protein-like protein [Delftia acidovorans SPH-1] Length = 412 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 106/184 (57%), Positives = 129/184 (70%), Gaps = 3/184 (1%) Query: 7 DFSATLALPETVDAQRRLFFYPGSSLGNFDPAQALDFLRRVRAALPAGPGEGGILIGLDL 66 D + L LP + RL FYPGSS+GNFDP QA L ++RA + +GG+LIG+DL Sbjct: 232 DITEPLTLPPHIPQAGRLLFYPGSSIGNFDPVQAQRMLGQMRAMVN---DDGGLLIGIDL 288 Query: 67 VKDARFLEAAYDDAIGVTAAFNLNVLNHVNALAGTDFAPRDWRHVAFYNARQQRIEMHLE 126 K ++LE AYDDA GVTA FNLN+L+HVN+L G+DF P DW HVAF+NA RIEMHL Sbjct: 289 PKSTQWLEPAYDDAQGVTARFNLNLLSHVNSLLGSDFNPDDWEHVAFFNAEHSRIEMHLR 348 Query: 127 ARRDLIVRWPGGRRTFHQGERIHTEYSHKFTEQDILGLLEEAGFGNCRMWFDERRWFAVC 186 ARR LIV WP G R F GE IHTE S+K+ + LG+L AGFG C++W DER+WFAV Sbjct: 349 ARRPLIVGWPQGLRHFSAGETIHTENSYKYPLPEFLGMLACAGFGPCQVWTDERQWFAVI 408 Query: 187 HAQA 190 HA A Sbjct: 409 HAHA 412 >ref|YP_001352885.1| hypothetical protein mma_1195 [Janthinobacterium sp. Marseille] gb|ABR89549.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 316 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 110/189 (58%), Positives = 138/189 (73%), Gaps = 3/189 (1%) Query: 1 MLPLAMDFSATLALPETVDAQRRLFFYPGSSLGNFDPAQALDFLRRVRAALPAGPGEGGI 60 M + MDFS+ LALP++V +RLFFYPGSS+GNF P ++L FL+R+RAA +GG+ Sbjct: 129 MTGVGMDFSSELALPDSVRDAKRLFFYPGSSIGNFTPDESLAFLQRIRAACDE---DGGL 185 Query: 61 LIGLDLVKDARFLEAAYDDAIGVTAAFNLNVLNHVNALAGTDFAPRDWRHVAFYNARQQR 120 LIG+DLVKD L+AAYDDA+GVTAAFNLN+L H+N L GTDF R WRH F+N + R Sbjct: 186 LIGVDLVKDKAVLDAAYDDALGVTAAFNLNLLRHLNHLLGTDFDVRAWRHRGFFNDKASR 245 Query: 121 IEMHLEARRDLIVRWPGGRRTFHQGERIHTEYSHKFTEQDILGLLEEAGFGNCRMWFDER 180 IEMHLEA + IVRWP G R F +GERIHTE S+K+T++ LLE+AGF W D + Sbjct: 246 IEMHLEAVSEQIVRWPQGERRFERGERIHTENSYKYTQRSFTDLLEQAGFRKLSFWTDPQ 305 Query: 181 RWFAVCHAQ 189 +WF VCHA Sbjct: 306 QWFMVCHAH 314