BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4289.p (529 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776808.1| ABC transporter ATPase [Herbaspirillum serop... 832 0.0 ref|YP_001352897.1| ABC-type uncharacterized transport system, d... 682 0.0 ref|YP_001100576.1| oligopeptide ABC transporter ATP-binding pro... 666 0.0 ref|YP_001857608.1| ABC transporter-like protein [Burkholderia p... 602 e-170 ref|YP_001896118.1| peptide ABC transporter ATPase [Burkholderia... 590 e-166 >ref|YP_003776808.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ64900.1| ABC-type uncharacterized transport system, duplicated ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 529 Score = 832 bits (2150), Expect = 0.0, Method: Composition-based stats. Identities = 487/519 (93%), Positives = 502/519 (96%) Query: 1 MSAPLLEVKDLTVRFGDTVVVDRVSFTIAPGEKFALVGESGSGKTVSSLAVMQLNQDARY 60 MSA LLEV +LTVRFGDTVVVDRVSF IAPGEKFALVGESGSGKTVSSLAVMQLNQDARY Sbjct: 1 MSAALLEVNNLTVRFGDTVVVDRVSFAIAPGEKFALVGESGSGKTVSSLAVMQLNQDARY 60 Query: 61 EGSILLDGQDVLKKNERQMQQVRGNDVAMIFQEPMTALNPLFTIGNQIAEVLMLHEGLNA 120 EGSILLDGQDVL K+ERQMQQVRGNDVAMIFQEPMTALNPLFTIGNQIAEVLM HEGLNA Sbjct: 61 EGSILLDGQDVLAKSERQMQQVRGNDVAMIFQEPMTALNPLFTIGNQIAEVLMHHEGLNA 120 Query: 121 RDAATRAVALLEKTGIPEPARRALSYPHELSGGQRQRAMIAMALACKPKLLIADEPTTAL 180 RDAA RAVALLEKTGIPEPARRALSYPHELSGGQRQRAMIAMALACKPKLLIADEPTTAL Sbjct: 121 RDAARRAVALLEKTGIPEPARRALSYPHELSGGQRQRAMIAMALACKPKLLIADEPTTAL 180 Query: 181 DVTIQVQILALLNQLQREENMAVLIISHDLNLVRHFADRVGVMEKGKLVESASVAELFAN 240 DVTIQVQILALLNQLQREENMAVLIISHDLNLVRHFADRVGVMEKGKLVESASVAELFAN Sbjct: 181 DVTIQVQILALLNQLQREENMAVLIISHDLNLVRHFADRVGVMEKGKLVESASVAELFAN 240 Query: 241 PQQPYTRKLLQSRPQRNAADVPAQAPVVLQAEKVRCTYHIKQGWFAKRAFHAVDGIDLQL 300 PQQPYTRKLLQSRPQRNAADV A APVVLQAE++RCTYHIKQGWFAKRAFHAVDG+DLQL Sbjct: 241 PQQPYTRKLLQSRPQRNAADVAADAPVVLQAERLRCTYHIKQGWFAKRAFHAVDGVDLQL 300 Query: 301 RRGETIGIVGESGSGKSTLGMALLRLSAASVAGSIRFEGTPISERSSRELRPLRARMQVV 360 RRGET+GIVGESGSGKSTLGMALLRLSAASVAGSIRF+G PISER RELRPLR+RMQVV Sbjct: 301 RRGETLGIVGESGSGKSTLGMALLRLSAASVAGSIRFDGVPISERPQRELRPLRSRMQVV 360 Query: 361 FQDPFASLSPRRTVEQIVGEGLALHHPGKTPEQQREAIVSALEEVGLTAAVLERYPHEFS 420 FQDPFASLSPRRTVEQIVGEGL LHHP ++ EQQR+AIV+ALEEVGL+AAVLERYPHEFS Sbjct: 361 FQDPFASLSPRRTVEQIVGEGLELHHPDRSAEQQRQAIVAALEEVGLSAAVLERYPHEFS 420 Query: 421 GGQRQRIAIARALVLQPELLLLDEPTSALDVTVQQQVLQLLADLQRRHGLAYLFITHDLA 480 GGQRQRIAIARALVLQPELLLLDEPTSALDVTVQQQVLQLLA+LQRRHGLAYLFITHDLA Sbjct: 421 GGQRQRIAIARALVLQPELLLLDEPTSALDVTVQQQVLQLLAELQRRHGLAYLFITHDLA 480 Query: 481 VVQAMAHQVIVMKDGKVVESGPAEQVLKQPQQEYTRRLV 519 VVQAMAHQVIVMKDGKVVESG QVL+QPQQEYTRRLV Sbjct: 481 VVQAMAHQVIVMKDGKVVESGATAQVLQQPQQEYTRRLV 519 >ref|YP_001352897.1| ABC-type uncharacterized transport system, duplicated ATPase component [Janthinobacterium sp. Marseille] gb|ABR89507.1| ABC-type uncharacterized transport system, duplicated ATPase component [Janthinobacterium sp. Marseille] Length = 533 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 367/521 (70%), Positives = 443/521 (85%) Query: 5 LLEVKDLTVRFGDTVVVDRVSFTIAPGEKFALVGESGSGKTVSSLAVMQLNQDARYEGSI 64 LL++++L V F + VV+ VSF+IA GEKFALVGESGSGKTV++L++++LNQDA Y G I Sbjct: 3 LLDIQNLQVSFDTSKVVNDVSFSIAAGEKFALVGESGSGKTVTALSLLRLNQDATYGGKI 62 Query: 65 LLDGQDVLKKNERQMQQVRGNDVAMIFQEPMTALNPLFTIGNQIAEVLMLHEGLNARDAA 124 L +GQD+L+K E M+ VRGNDVAMIFQEPMTALNPLFTIGNQIAEVLMLHEG++AR AA Sbjct: 63 LFEGQDILQKTEAAMRSVRGNDVAMIFQEPMTALNPLFTIGNQIAEVLMLHEGISARAAA 122 Query: 125 TRAVALLEKTGIPEPARRALSYPHELSGGQRQRAMIAMALACKPKLLIADEPTTALDVTI 184 R V LL+KTGIPEP RRALSYPHELSGGQRQRAMIAMALACKPKLLIADEPTTALDVTI Sbjct: 123 LRTVELLDKTGIPEPQRRALSYPHELSGGQRQRAMIAMALACKPKLLIADEPTTALDVTI 182 Query: 185 QVQILALLNQLQREENMAVLIISHDLNLVRHFADRVGVMEKGKLVESASVAELFANPQQP 244 QVQI+ LLNQLQREENMAVL+I+HDLNLVRHFADRVGVMEKG+L+E A+ +LF+ P++ Sbjct: 183 QVQIVELLNQLQREENMAVLMITHDLNLVRHFADRVGVMEKGRLLEVATTQQLFSAPREA 242 Query: 245 YTRKLLQSRPQRNAADVPAQAPVVLQAEKVRCTYHIKQGWFAKRAFHAVDGIDLQLRRGE 304 YT+KLL S+P + V A +L+AE+V CT+ IK+GWF K F AVD +D+Q++ GE Sbjct: 243 YTKKLLASQPHQLVNVVSEAATPLLKAEQVSCTFDIKKGWFKKIPFVAVDQVDVQVKPGE 302 Query: 305 TIGIVGESGSGKSTLGMALLRLSAASVAGSIRFEGTPISERSSRELRPLRARMQVVFQDP 364 T+GIVGESGSGKSTLG+ALLRLS A V G I F+G I+ +S LRPLRARMQ+VFQDP Sbjct: 303 TLGIVGESGSGKSTLGLALLRLSGAHVKGEIAFDGQAITHQSRDALRPLRARMQIVFQDP 362 Query: 365 FASLSPRRTVEQIVGEGLALHHPGKTPEQQREAIVSALEEVGLTAAVLERYPHEFSGGQR 424 FASLSPRRTVEQIVGEGLALH P P R+A+ L+EVGL+A ++ RYPHEFSGGQR Sbjct: 363 FASLSPRRTVEQIVGEGLALHQPQLGPHGIRKAVADGLQEVGLSAEMMTRYPHEFSGGQR 422 Query: 425 QRIAIARALVLQPELLLLDEPTSALDVTVQQQVLQLLADLQRRHGLAYLFITHDLAVVQA 484 QRIAIARALVL+P+L+LLDEPTS+LDV+VQ QVL LLADLQ+++G+AY+FI+HDLAV++A Sbjct: 423 QRIAIARALVLKPDLILLDEPTSSLDVSVQHQVLLLLADLQKKYGMAYIFISHDLAVIRA 482 Query: 485 MAHQVIVMKDGKVVESGPAEQVLKQPQQEYTRRLVAAATYA 525 MAH+V+VMKDG+VVE G + VL +P + YT+RL+AA+ YA Sbjct: 483 MAHRVMVMKDGRVVEQGLTQTVLSKPSEPYTQRLLAASVYA 523 >ref|YP_001100576.1| oligopeptide ABC transporter ATP-binding protein [Herminiimonas arsenicoxydans] emb|CAL62454.1| ABC transporter, putative nickel-or polyamine-transporting ATPase [Herminiimonas arsenicoxydans] Length = 534 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 369/523 (70%), Positives = 440/523 (84%) Query: 5 LLEVKDLTVRFGDTVVVDRVSFTIAPGEKFALVGESGSGKTVSSLAVMQLNQDARYEGSI 64 LLE+++L V F + VV+ VSF+IA GEKFALVGESGSGKTV++L++++LNQDA Y G I Sbjct: 3 LLEIQNLQVSFDTSKVVNDVSFSIAAGEKFALVGESGSGKTVTALSILRLNQDAAYAGRI 62 Query: 65 LLDGQDVLKKNERQMQQVRGNDVAMIFQEPMTALNPLFTIGNQIAEVLMLHEGLNARDAA 124 L +GQD+L+++E M+ VRG DVAMIFQEPMTALNPLFTIGNQIAE LMLHEGL+AR AA Sbjct: 63 LFEGQDILQRSEAAMRAVRGKDVAMIFQEPMTALNPLFTIGNQIAEGLMLHEGLSARIAA 122 Query: 125 TRAVALLEKTGIPEPARRALSYPHELSGGQRQRAMIAMALACKPKLLIADEPTTALDVTI 184 RA+ LL+KTGIPEP RRALSYPH+LSGGQRQRAMIAMALACKPKLLIADEPTTALDVTI Sbjct: 123 LRAIELLDKTGIPEPQRRALSYPHQLSGGQRQRAMIAMALACKPKLLIADEPTTALDVTI 182 Query: 185 QVQILALLNQLQREENMAVLIISHDLNLVRHFADRVGVMEKGKLVESASVAELFANPQQP 244 QVQI+ LLNQLQREENMAVL+I+HDLNLVRHFADRVGVMEKG LVE A+ ELF P++ Sbjct: 183 QVQIVELLNQLQREENMAVLMITHDLNLVRHFADRVGVMEKGCLVEVAATRELFTAPRET 242 Query: 245 YTRKLLQSRPQRNAADVPAQAPVVLQAEKVRCTYHIKQGWFAKRAFHAVDGIDLQLRRGE 304 YTRKLL S+PQ+ + A +L AE VRCT+ IKQGWF F AVD + +Q+R GE Sbjct: 243 YTRKLLASQPQQLVNTLNESAVPLLSAEHVRCTFDIKQGWFKTTPFVAVDDVSVQVRPGE 302 Query: 305 TIGIVGESGSGKSTLGMALLRLSAASVAGSIRFEGTPISERSSRELRPLRARMQVVFQDP 364 T+GIVGESGSGK+TLG+ALLRLS+A V+G+I F+G P++ S LRPLRARMQ+VFQDP Sbjct: 303 TLGIVGESGSGKTTLGLALLRLSSARVSGTIAFDGKPLNAMQSDALRPLRARMQIVFQDP 362 Query: 365 FASLSPRRTVEQIVGEGLALHHPGKTPEQQREAIVSALEEVGLTAAVLERYPHEFSGGQR 424 FASLSPRRT+EQIVGEGLALH P R+A+ AL EVGL ++ RYPHEFSGGQR Sbjct: 363 FASLSPRRTIEQIVGEGLALHQPQLGAAGIRKAVADALLEVGLPPDIMARYPHEFSGGQR 422 Query: 425 QRIAIARALVLQPELLLLDEPTSALDVTVQQQVLQLLADLQRRHGLAYLFITHDLAVVQA 484 QRIAIAR LVL+P+L+LLDEPTS+LDV+VQQQVLQLL +LQ+++ LAY+FI+HDLAV++A Sbjct: 423 QRIAIARVLVLKPDLVLLDEPTSSLDVSVQQQVLQLLLELQKKYELAYIFISHDLAVIRA 482 Query: 485 MAHQVIVMKDGKVVESGPAEQVLKQPQQEYTRRLVAAATYAEA 527 MAH+V+VMKDGKVVESG + VL QP + YT+RL+AA+ YA A Sbjct: 483 MAHRVMVMKDGKVVESGMTQAVLSQPTEAYTQRLLAASVYAAA 525 >ref|YP_001857608.1| ABC transporter-like protein [Burkholderia phymatum STM815] gb|ACC70562.1| ABC transporter related [Burkholderia phymatum STM815] Length = 539 Score = 602 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 325/528 (61%), Positives = 409/528 (77%), Gaps = 9/528 (1%) Query: 3 APLLEVKDLTVRFGDTVVVDRVSFTIAPGEKFALVGESGSGKTVSSLAVMQLNQDARYEG 62 APLLE+ L V FGDTV VD VS +IA GE+ ALVGESGSGK+V++L++++L DA+ G Sbjct: 10 APLLELDHLRVTFGDTVAVDDVSLSIARGERVALVGESGSGKSVTALSILRLLSDAQTSG 69 Query: 63 SILLDGQDVLKKNERQMQQVRGNDVAMIFQEPMTALNPLFTIGNQIAEVLMLHEGLNARD 122 S+ DG+D+L K+ER+M+ +RG+D+AMIFQEPMTALNPL+T+G QIAE ++LH+G+ A + Sbjct: 70 SVRFDGEDLLMKSEREMRGLRGSDIAMIFQEPMTALNPLYTVGEQIAETIVLHDGVGAAE 129 Query: 123 AATRAVALLEKTGIPEPARRALSYPHELSGGQRQRAMIAMALACKPKLLIADEPTTALDV 182 A RAVALLE+TGI EP +R SYPH+LSGGQRQRAMIAMALAC+P+LL+ADEPTTALDV Sbjct: 130 ARKRAVALLERTGITEPGKRVNSYPHQLSGGQRQRAMIAMALACRPRLLLADEPTTALDV 189 Query: 183 TIQVQILALLNQLQREE----NMAVLIISHDLNLVRHFADRVGVMEKGKLVESASVAELF 238 TI+ QI+ LL +LQR+E MAVL+I+HDLNLVRHFA RV VMEKG LVES +V LF Sbjct: 190 TIRAQIVELLLELQRDEAEKRGMAVLLITHDLNLVRHFAQRVAVMEKGVLVESGTVDTLF 249 Query: 239 ANPQQPYTRKLLQSRPQRNAADVPAQAPVVLQAEKVRCTYHIK----QGWFAKRAFHAVD 294 +PQ PYT++LLQSRP+R V APV+L A V + K GWF F AV Sbjct: 250 ESPQHPYTQRLLQSRPERTVVPVLPIAPVLLDARDVSVDFRTKLPGFAGWFRAGHFRAVA 309 Query: 295 GIDLQLRRGETIGIVGESGSGKSTLGMALLRLSAASVAGSIRFEGTPISERSSRELRPLR 354 G + +R+GET+GIVGESGSGKSTL MALL L S G+I F+G + RE LR Sbjct: 310 GATVSVRQGETLGIVGESGSGKSTLAMALLGLQKTS-HGAIEFQGRALGSYRGREQTALR 368 Query: 355 ARMQVVFQDPFASLSPRRTVEQIVGEGLALHHPGKTPEQQREAIVSALEEVGLTAAVLER 414 + MQVVFQDPF+SLSPR+T+E+IVGEGLALH P T + +R+ +VS L EVG+ L R Sbjct: 369 SNMQVVFQDPFSSLSPRQTIERIVGEGLALHRPQLTSDARRDKVVSVLREVGIDRTALHR 428 Query: 415 YPHEFSGGQRQRIAIARALVLQPELLLLDEPTSALDVTVQQQVLQLLADLQRRHGLAYLF 474 YPHEFSGGQRQRIAIARALVL+P +L+LDEPTSALDV++QQQVL+LLA LQR++ L ++F Sbjct: 429 YPHEFSGGQRQRIAIARALVLEPRILILDEPTSALDVSIQQQVLKLLAGLQRKYNLGFIF 488 Query: 475 ITHDLAVVQAMAHQVIVMKDGKVVESGPAEQVLKQPQQEYTRRLVAAA 522 I+HDLAV+ AMAH+V VM++G +VE+G EQ+ +P YTR+L+ AA Sbjct: 489 ISHDLAVIGAMAHRVAVMQNGLIVETGAVEQIFGEPAHPYTRKLLKAA 536 >ref|YP_001896118.1| peptide ABC transporter ATPase [Burkholderia phytofirmans PsJN] gb|ACD16894.1| ABC transporter related [Burkholderia phytofirmans PsJN] Length = 544 Score = 590 bits (1521), Expect = e-166, Method: Composition-based stats. Identities = 316/527 (59%), Positives = 408/527 (77%), Gaps = 9/527 (1%) Query: 4 PLLEVKDLTVRFGDTVVVDRVSFTIAPGEKFALVGESGSGKTVSSLAVMQLNQDARYEGS 63 PLLE+ L VRFGDTV V V+ I GE+ ALVGESGSGK+V++L++++L DA+ GS Sbjct: 16 PLLELDHLHVRFGDTVAVSDVTLAIQRGERVALVGESGSGKSVTALSILRLLSDAQVSGS 75 Query: 64 ILLDGQDVLKKNERQMQQVRGNDVAMIFQEPMTALNPLFTIGNQIAEVLMLHEGLNARDA 123 I DG+D+L K ER+M+ +RG+D+AMIFQEPMTALNPL+T+G+QIAE +++H+G++A +A Sbjct: 76 IRFDGEDLLGKTEREMRGMRGSDIAMIFQEPMTALNPLYTVGDQIAETIVVHDGVSANEA 135 Query: 124 ATRAVALLEKTGIPEPARRALSYPHELSGGQRQRAMIAMALACKPKLLIADEPTTALDVT 183 RAVALL +TGI EP +R SYPH+LSGGQRQRAMIAMALAC+P+LL+ADEPTTALDVT Sbjct: 136 RKRAVALLGRTGIAEPGKRVNSYPHQLSGGQRQRAMIAMALACRPRLLLADEPTTALDVT 195 Query: 184 IQVQILALLNQLQREE----NMAVLIISHDLNLVRHFADRVGVMEKGKLVESASVAELFA 239 I+ QI+ LL +LQR+E MAVL+I+HDLNLVRHFA R+ VMEKG LVES V ++F Sbjct: 196 IRAQIVDLLLELQRDEAEKRGMAVLLITHDLNLVRHFAQRIAVMEKGVLVESGPVEQVFE 255 Query: 240 NPQQPYTRKLLQSRPQRNAADVPAQAPVVLQAEKVRCTYHIK----QGWFAKRAFHAVDG 295 +PQ PYT++LL SRPQR V +PV+L+A ++ + K GWF F AV Sbjct: 256 SPQHPYTQRLLASRPQRTVVPVLPISPVLLEAREISVDFKTKLPGFSGWFRSGRFRAVAD 315 Query: 296 IDLQLRRGETIGIVGESGSGKSTLGMALLRLSAASVAGSIRFEGTPISERSSRELRPLRA 355 ++ +R+GET+GIVGESGSGKSTL MALL L +V G I F+G + E LR+ Sbjct: 316 ANVSVRQGETLGIVGESGSGKSTLAMALLGLQ-RTVHGEIEFQGRALGSYRGAEQTALRS 374 Query: 356 RMQVVFQDPFASLSPRRTVEQIVGEGLALHHPGKTPEQQREAIVSALEEVGLTAAVLERY 415 MQVVFQDPF+SLSPR+T+E+IVGEGLALH P TP+ +R+ ++S L EVGL VL+RY Sbjct: 375 NMQVVFQDPFSSLSPRQTIERIVGEGLALHRPAMTPQARRDKVISVLREVGLDRTVLQRY 434 Query: 416 PHEFSGGQRQRIAIARALVLQPELLLLDEPTSALDVTVQQQVLQLLADLQRRHGLAYLFI 475 PHEFSGGQRQRIAIARALVL+P +L+LDEPTSALDV++QQQVL+LLA LQ+++ L ++FI Sbjct: 435 PHEFSGGQRQRIAIARALVLEPRILILDEPTSALDVSIQQQVLKLLAGLQQKYNLGFVFI 494 Query: 476 THDLAVVQAMAHQVIVMKDGKVVESGPAEQVLKQPQQEYTRRLVAAA 522 +HDLAV+ AMAH+V VM++G +VESG E++ P YTR+L+ AA Sbjct: 495 SHDLAVIGAMAHRVAVMQNGSIVESGEVEEIFSTPAHPYTRKLLKAA 541