BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4281.p (469 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776801.1| hypothetical protein Hsero_3412 [Herbaspiril... 697 0.0 ref|ZP_02400691.1| hypothetical protein BpseD_00455 [Burkholderi... 642 0.0 emb|CBJ40986.1| conserved hypothethical protein [Ralstonia solan... 638 0.0 ref|YP_003751763.1| hypothetical protein RPSI07_1107 [Ralstonia ... 619 e-175 ref|YP_004677128.1| hypothetical protein HYPMC_3347 [Hyphomicrob... 618 e-175 >ref|YP_003776801.1| hypothetical protein Hsero_3412 [Herbaspirillum seropedicae SmR1] gb|ADJ64893.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 469 Score = 697 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 436/469 (92%), Positives = 456/469 (97%) Query: 1 MHDIICPHCGKAFKIDEAGYADILSQVRDSAFEQQLHERLELAEQDKRNAIELARAKSEA 60 MHDIICP+C KAFKIDEAGYADIL+QVRDSAFEQQLHERLELAEQDKRNAIELARAK+EA Sbjct: 1 MHDIICPYCNKAFKIDEAGYADILAQVRDSAFEQQLHERLELAEQDKRNAIELARAKAEA 60 Query: 61 ELQKAAAARDAEIQELKARLEAGEMAQKMAVAEAMANVERERDKLANDLEQARREKLAEQ 120 ELQKAAAARDAEIQELK+RLEAGE+AQKMAVAEAMA VERERDKLA DLEQAR+EK A+ Sbjct: 61 ELQKAAAARDAEIQELKSRLEAGELAQKMAVAEAMAQVERERDKLAYDLEQARKEKQADL 120 Query: 121 QLAEARPAQQLQQTASEKDAEIQALKAKMDSIALTQKLAVNEAVGAVEKQRDELKSKLMH 180 QLAEAR AQQLQQT S+KDAEIQ LKA+M+SIAL+QKLAVNEAVGAVEK+RDELKS LM Sbjct: 121 QLAEARLAQQLQQTVSDKDAEIQTLKARMESIALSQKLAVNEAVGAVEKERDELKSSLMR 180 Query: 181 AELEKQLAEKSLKDKYETQLKDREDMIERLRDMKARLSTKMVGETLEQHCETEFNRIRAT 240 +ELEKQLAE+SLKDKYETQLKDREDMIERLRDMKARLSTKMVGETLEQHCETEFNRIRAT Sbjct: 181 SELEKQLAEQSLKDKYETQLKDREDMIERLRDMKARLSTKMVGETLEQHCETEFNRIRAT 240 Query: 241 AFPRAYFEKDNDARSGSKGDYIFRDTDEGGTEIVSIMFEMKNESDRTATKNRNEDFLKEL 300 AFPRAYFEKDNDARSGSKGDYIFRDTDEGGTEIVSIMFEMKNESDRTATKNRNEDFLKEL Sbjct: 241 AFPRAYFEKDNDARSGSKGDYIFRDTDEGGTEIVSIMFEMKNESDRTATKNRNEDFLKEL 300 Query: 301 DKDRQEKGCEYAVLVSLLEPESELYNTGIVDVFHRYPKMYVVRPQFFIPIITLLRNAALN 360 DKDRQEKGCEYAVLVS+LEP+SELYNTGIVDVFHRYPKMYVVRPQFFIPIITLLRNAALN Sbjct: 301 DKDRQEKGCEYAVLVSMLEPDSELYNTGIVDVFHRYPKMYVVRPQFFIPIITLLRNAALN 360 Query: 361 SLKYKNELAVVKAQNIDITNFESELDTFKAAFAKNYDLASRRFQTAIDEIDKSIDHLQKT 420 SLKYKNELA+VKAQNIDITNFESELDTFKAAFAKNYDLASRRFQTAIDEIDKSIDHLQKT Sbjct: 361 SLKYKNELALVKAQNIDITNFESELDTFKAAFAKNYDLASRRFQTAIDEIDKSIDHLQKT 420 Query: 421 KEALLGTDRNLRLANDKAQDVTIKRLTRGNPTMAAKFAEVKKDPSDDEQ 469 KEALLGTDRNLRLANDKAQDVTIKRLTRGNPTMAAKFAE+ K+ S+D Q Sbjct: 421 KEALLGTDRNLRLANDKAQDVTIKRLTRGNPTMAAKFAEINKEQSEDGQ 469 >ref|ZP_02400691.1| hypothetical protein BpseD_00455 [Burkholderia pseudomallei DM98] Length = 485 Score = 642 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 381/461 (82%), Positives = 428/461 (92%) Query: 1 MHDIICPHCGKAFKIDEAGYADILSQVRDSAFEQQLHERLELAEQDKRNAIELARAKSEA 60 MH+IICPHCGKAFKIDEAGYADIL QVRD+ FEQQLHERLELAEQDKRNAIELA K + Sbjct: 1 MHEIICPHCGKAFKIDEAGYADILKQVRDNEFEQQLHERLELAEQDKRNAIELATTKVAS 60 Query: 61 ELQKAAAARDAEIQELKARLEAGEMAQKMAVAEAMANVERERDKLANDLEQARREKLAEQ 120 ELQK A A+D+EIQELKA+L+AGE+A+K+AV EA++ VE+ERD LAN+LEQA+R++ A Sbjct: 61 ELQKVAVAKDSEIQELKAKLDAGEVARKLAVTEALSAVEKERDALANELEQAKRDRHAVS 120 Query: 121 QLAEARPAQQLQQTASEKDAEIQALKAKMDSIALTQKLAVNEAVGAVEKQRDELKSKLMH 180 +LAEAR +LQ+TA+ KDAEIQ LKA++D++ + +KLA+ EAV VEK+RD+LK+ L Sbjct: 121 ELAEARLVSELQRTAATKDAEIQDLKARLDAVEVAKKLAITEAVSVVEKERDDLKNGLAR 180 Query: 181 AELEKQLAEKSLKDKYETQLKDREDMIERLRDMKARLSTKMVGETLEQHCETEFNRIRAT 240 A LEKQLAE+SLKDKYETQ+KDR+D IERLRDMKARLSTKMVGETLEQHCETEFNRIRAT Sbjct: 181 AALEKQLAEQSLKDKYETQIKDRDDAIERLRDMKARLSTKMVGETLEQHCETEFNRIRAT 240 Query: 241 AFPRAYFEKDNDARSGSKGDYIFRDTDEGGTEIVSIMFEMKNESDRTATKNRNEDFLKEL 300 AFPRAYFEKDNDAR+GSKGDYIFRD+DE GTEIVSIMFEMKNESDRTATKNRNEDFLKEL Sbjct: 241 AFPRAYFEKDNDARTGSKGDYIFRDSDESGTEIVSIMFEMKNESDRTATKNRNEDFLKEL 300 Query: 301 DKDRQEKGCEYAVLVSLLEPESELYNTGIVDVFHRYPKMYVVRPQFFIPIITLLRNAALN 360 DKDR EKGCEYAVLVSLLEP+SELYNTGIVD+FHRYPKMYVVRPQFFIPIITLLRNAA+N Sbjct: 301 DKDRTEKGCEYAVLVSLLEPDSELYNTGIVDMFHRYPKMYVVRPQFFIPIITLLRNAAMN 360 Query: 361 SLKYKNELAVVKAQNIDITNFESELDTFKAAFAKNYDLASRRFQTAIDEIDKSIDHLQKT 420 SLKYK+ELA+VKAQNIDITNFE+EL++FK AF KNY+LASRRFQTAIDEIDKSIDHLQKT Sbjct: 361 SLKYKSELALVKAQNIDITNFETELESFKTAFGKNYELASRRFQTAIDEIDKSIDHLQKT 420 Query: 421 KEALLGTDRNLRLANDKAQDVTIKRLTRGNPTMAAKFAEVK 461 KEALLGTDRNLRLANDKAQDVTIKRLTRGNPTMAAKFA++K Sbjct: 421 KEALLGTDRNLRLANDKAQDVTIKRLTRGNPTMAAKFADLK 461 >emb|CBJ40986.1| conserved hypothethical protein [Ralstonia solanacearum CMR15] Length = 469 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 389/467 (83%), Positives = 437/467 (93%) Query: 1 MHDIICPHCGKAFKIDEAGYADILSQVRDSAFEQQLHERLELAEQDKRNAIELARAKSEA 60 MH+IICPHCGKAFKIDEAGYADIL QVRDS FEQQLHERLELAEQDKRNA+ELA+ K + Sbjct: 1 MHEIICPHCGKAFKIDEAGYADILKQVRDSEFEQQLHERLELAEQDKRNAVELAQTKVAS 60 Query: 61 ELQKAAAARDAEIQELKARLEAGEMAQKMAVAEAMANVERERDKLANDLEQARREKLAEQ 120 E+QKAAAA+D EIQEL+A+++AGE+AQK+AVAEA++ VE++RD+LA++LEQA+R+K A Sbjct: 61 EMQKAAAAKDTEIQELRAKVDAGEVAQKLAVAEALSAVEKKRDELASELEQAKRDKQAAD 120 Query: 121 QLAEARPAQQLQQTASEKDAEIQALKAKMDSIALTQKLAVNEAVGAVEKQRDELKSKLMH 180 +LA+A+ A +LQ+TA+ KD EIQALKAK+D+I +TQKLA+ EAV AVEK+RDELKS L Sbjct: 121 KLADAKLANELQRTAATKDTEIQALKAKLDAIEVTQKLAITEAVSAVEKERDELKSGLER 180 Query: 181 AELEKQLAEKSLKDKYETQLKDREDMIERLRDMKARLSTKMVGETLEQHCETEFNRIRAT 240 AELEKQLAEKSLKDKYETQ+KDR+D IERLRDMKARLSTKM+GETLEQHCETEFNRIRA Sbjct: 181 AELEKQLAEKSLKDKYETQIKDRDDAIERLRDMKARLSTKMIGETLEQHCETEFNRIRAM 240 Query: 241 AFPRAYFEKDNDARSGSKGDYIFRDTDEGGTEIVSIMFEMKNESDRTATKNRNEDFLKEL 300 AFPRAYFEKDNDAR+GSKGDYIFRD+DE GTEIVSIMFEMKNESDRT TKN+NEDFLKEL Sbjct: 241 AFPRAYFEKDNDARTGSKGDYIFRDSDEDGTEIVSIMFEMKNESDRTVTKNKNEDFLKEL 300 Query: 301 DKDRQEKGCEYAVLVSLLEPESELYNTGIVDVFHRYPKMYVVRPQFFIPIITLLRNAALN 360 DKDR EKGCEYAVLVSLLEPESELYNTGIVDVFHRYPKMY+VRPQFF+PIITLLRNAA+N Sbjct: 301 DKDRTEKGCEYAVLVSLLEPESELYNTGIVDVFHRYPKMYIVRPQFFLPIITLLRNAAMN 360 Query: 361 SLKYKNELAVVKAQNIDITNFESELDTFKAAFAKNYDLASRRFQTAIDEIDKSIDHLQKT 420 SLKYK+ELA+VKAQNIDITNFE++L+TFK AFAKNYDLASRRFQTAIDEIDKSIDHLQKT Sbjct: 361 SLKYKSELALVKAQNIDITNFETQLETFKTAFAKNYDLASRRFQTAIDEIDKSIDHLQKT 420 Query: 421 KEALLGTDRNLRLANDKAQDVTIKRLTRGNPTMAAKFAEVKKDPSDD 467 KEALLGTDRNLRLANDKAQDVTIK+LTRGNPTMAAKFAE+K S D Sbjct: 421 KEALLGTDRNLRLANDKAQDVTIKKLTRGNPTMAAKFAELKNQDSSD 467 >ref|YP_003751763.1| hypothetical protein RPSI07_1107 [Ralstonia solanacearum PSI07] emb|CBJ50466.1| conserved hypothethical protein [Ralstonia solanacearum PSI07] Length = 469 Score = 619 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 375/467 (80%), Positives = 425/467 (91%), Gaps = 1/467 (0%) Query: 1 MHDIICPHCGKAFKIDEAGYADILSQVRDSAFEQQLHERLELAEQDKRNAIELARAKSEA 60 MH+IICPHCGKAFKIDEAGYADIL QVRDS FEQQLHERLELAEQDK NA+ELA K + Sbjct: 1 MHEIICPHCGKAFKIDEAGYADILKQVRDSEFEQQLHERLELAEQDKLNAVELATTKVAS 60 Query: 61 ELQKAAAARDAEIQELKARLEAGEMAQKMAVAEAMANVERERDKLANDLEQARREKLAEQ 120 ELQKA+AA+D+EIQELKA+L+AGE+ +K+AV EA++ VE+ERD LAN+LEQARRE+ + Sbjct: 61 ELQKASAAKDSEIQELKAKLDAGEVVRKLAVTEALSTVEKERDALANELEQARRERESAA 120 Query: 121 QLAEARPAQQLQQTASEKDAEIQALKAKMDSIALTQKLAVNEAVGAVEKQRDELKSKLMH 180 +LAEA +LQ+ A+ KDA IQ L +K+ ++ + QKLA++EAVG VEK+RDEL+S L Sbjct: 121 KLAEANLLNELQKAAATKDAAIQELTSKLGAMEVAQKLAISEAVGRVEKERDELRSGLER 180 Query: 181 AELEKQLAEKSLKDKYETQLKDREDMIERLRDMKARLSTKMVGETLEQHCETEFNRIRAT 240 AELEKQLAEKSLKDKYETQ+KDR+D IERLRDMKARLSTKMVGETLEQHCETEFNRIRAT Sbjct: 181 AELEKQLAEKSLKDKYETQIKDRDDAIERLRDMKARLSTKMVGETLEQHCETEFNRIRAT 240 Query: 241 AFPRAYFEKDNDARSGSKGDYIFRDTDEGGTEIVSIMFEMKNESDRTATKNRNEDFLKEL 300 AFPRAYFEKDND R+GSKGDYIFRD DE GTEIVSIMFEMKNE+DRTATKNRNE+FLKEL Sbjct: 241 AFPRAYFEKDNDTRTGSKGDYIFRDADEAGTEIVSIMFEMKNENDRTATKNRNEEFLKEL 300 Query: 301 DKDRQEKGCEYAVLVSLLEPESELYNTGIVDVFHRYPKMYVVRPQFFIPIITLLRNAALN 360 DKDR EKGCEYAVLVSLLEP+++LYNTGIVDVFHR+PKMYVVRPQFFIPIITLLRNAA+N Sbjct: 301 DKDRTEKGCEYAVLVSLLEPDNDLYNTGIVDVFHRFPKMYVVRPQFFIPIITLLRNAAMN 360 Query: 361 SLKYKNELAVVKAQNIDITNFESELDTFKAAFAKNYDLASRRFQTAIDEIDKSIDHLQKT 420 SLKYK+ELA+VKAQNIDIT FE+EL+TFKAAFA+NYDLAS FQ AI EIDKSIDHLQKT Sbjct: 361 SLKYKSELALVKAQNIDITKFEAELETFKAAFARNYDLASGHFQKAIAEIDKSIDHLQKT 420 Query: 421 KEALLGTDRNLRLANDKAQDVTIKRLTRGNPTMAAKFAEVK-KDPSD 466 K+ALLGTDRNLRLANDKAQDVTIK+LTRGN TMAAKFAE+K ++PSD Sbjct: 421 KDALLGTDRNLRLANDKAQDVTIKKLTRGNSTMAAKFAELKNQNPSD 467 >ref|YP_004677128.1| hypothetical protein HYPMC_3347 [Hyphomicrobium sp. MC1] emb|CCB66562.1| Conserved hypothethical protein [Hyphomicrobium sp. MC1] Length = 469 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 365/467 (78%), Positives = 420/467 (89%), Gaps = 1/467 (0%) Query: 1 MHDIICPHCGKAFKIDEAGYADILSQVRDSAFEQQLHERLELAEQDKRNAIELARAKSEA 60 M++IICPHCGKAFKIDE+GYADIL QV DS FE+QLHERLELAEQDKR+A+ELAR K + Sbjct: 1 MNEIICPHCGKAFKIDESGYADILKQVHDSEFEKQLHERLELAEQDKRSAVELARTKVAS 60 Query: 61 ELQKAAAARDAEIQELKARLEAGEMAQKMAVAEAMANVERERDKLANDLEQARREKLAEQ 120 E Q +AA+DAEIQELK++LEAGE+A+++AV A++ VE+ERD LAN+L QA+ +K A Sbjct: 61 EFQNTSAAKDAEIQELKSKLEAGEVARQLAVTRALSAVEKERDSLANELTQAKNDKKAAS 120 Query: 121 QLAEARPAQQLQQTASEKDAEIQALKAKMDSIALTQKLAVNEAVGAVEKQRDELKSKLMH 180 +L EAR A +LQ+ S KDAEIQ LKAK+ + + KLA+NEAV VEK+RD LKS + Sbjct: 121 ELGEARLANELQKAVSTKDAEIQDLKAKLAAAEVAHKLAINEAVNVVEKERDVLKSGVER 180 Query: 181 AELEKQLAEKSLKDKYETQLKDREDMIERLRDMKARLSTKMVGETLEQHCETEFNRIRAT 240 AELEKQLAEK+LKDKYETQ+KDR+D IERLRDMKARLSTKMVGETLEQHCETEFNRIRAT Sbjct: 181 AELEKQLAEKALKDKYETQIKDRDDAIERLRDMKARLSTKMVGETLEQHCETEFNRIRAT 240 Query: 241 AFPRAYFEKDNDARSGSKGDYIFRDTDEGGTEIVSIMFEMKNESDRTATKNRNEDFLKEL 300 AFPRAYFEKDND R+GSKGDYIFRD+DE TEI+SIMFEMKNESDRT TKN+NEDFLKEL Sbjct: 241 AFPRAYFEKDNDTRTGSKGDYIFRDSDESATEIISIMFEMKNESDRTTTKNKNEDFLKEL 300 Query: 301 DKDRQEKGCEYAVLVSLLEPESELYNTGIVDVFHRYPKMYVVRPQFFIPIITLLRNAALN 360 DKDR EKGCEYAVLVSLLEP+SELYNTGIVDVFHRYPKMYVVRPQFFIPIITLLRNAA+N Sbjct: 301 DKDRTEKGCEYAVLVSLLEPDSELYNTGIVDVFHRYPKMYVVRPQFFIPIITLLRNAAIN 360 Query: 361 SLKYKNELAVVKAQNIDITNFESELDTFKAAFAKNYDLASRRFQTAIDEIDKSIDHLQKT 420 SLKYK+ELA+++AQNIDITNFE++L+TFK FAKNYDLAS+RFQTAIDEIDKSIDHLQKT Sbjct: 361 SLKYKSELALIRAQNIDITNFETQLETFKTGFAKNYDLASKRFQTAIDEIDKSIDHLQKT 420 Query: 421 KEALLGTDRNLRLANDKAQDVTIKRLTRGNPTMAAKFAEVKKD-PSD 466 ++AL+G DRNLRLANDKAQDVT+K+LTRGNPTMAAKFA++K + PSD Sbjct: 421 RDALIGADRNLRLANDKAQDVTLKKLTRGNPTMAAKFADLKDNGPSD 467