BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4274.p (242 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776795.1| hypothetical protein Hsero_3406 [Herbaspiril... 352 4e-95 ref|YP_004362156.1| hypothetical protein bgla_1g35970 [Burkholde... 150 1e-34 ref|ZP_06844637.1| hypothetical protein BCh11DRAFT_5904 [Burkhol... 147 9e-34 ref|YP_001118285.1| hypothetical protein Bcep1808_0438 [Burkhold... 147 1e-33 ref|YP_004350072.1| hypothetical protein bgla_2g21260 [Burkholde... 130 2e-28 >ref|YP_003776795.1| hypothetical protein Hsero_3406 [Herbaspirillum seropedicae SmR1] gb|ADJ64887.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 243 Score = 352 bits (902), Expect = 4e-95, Method: Composition-based stats. Identities = 177/188 (94%), Positives = 183/188 (97%) Query: 55 MATLSADQQQWMTTALRSAPHAEEPPILCAWLESVADPERLVRGLTRFLIGPGVEDRQVY 114 MATL+ADQQQWMTTALRSAPHAEEPPILCAWLES ADPERLVR +TRFLIGPGVEDRQ+Y Sbjct: 1 MATLTADQQQWMTTALRSAPHAEEPPILCAWLESAADPERLVRSVTRFLIGPGVEDRQIY 60 Query: 115 WRYYDPRVLALTLQLFSDEQTRALLGPVTQWRFPWSGHWWSVTGPGEEIDVLGGSRPAWP 174 WRYYDPRVLALTLQLFSDEQTRALLGPVTQWRFPWSGHWWSVTGPGEE+DVLGGSRPAWP Sbjct: 61 WRYYDPRVLALTLQLFSDEQTRALLGPVTQWRFPWSGHWWSVTGPGEEVDVLGGSRPAWP 120 Query: 175 DASQWHSLAHCDVLDKVLRQLPENLAACTPPEILQYLRRGDSALMHARQVLKLTDPGELT 234 DASQWHSLAHCDVLD+VLRQLPE LAACTPPEIL YLRRGDSALM AR+VLKLTDPGELT Sbjct: 121 DASQWHSLAHCDVLDRVLRQLPEKLAACTPPEILLYLRRGDSALMRARKVLKLTDPGELT 180 Query: 235 EYALHCLR 242 EYALHCLR Sbjct: 181 EYALHCLR 188 >ref|YP_004362156.1| hypothetical protein bgla_1g35970 [Burkholderia gladioli BSR3] gb|AEA62200.1| hypothetical protein bgla_1g35970 [Burkholderia gladioli BSR3] Length = 254 Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 81/196 (41%), Positives = 110/196 (56%) Query: 1 MHAISFPDEVITHGQVLVEPANLDPRSPLHELPMRVCEVGRIKDADDLMPRLIDMATLSA 60 M A EV+T G +LVEPA L L L MR C + ++LMPRLID+A L Sbjct: 12 MQAAPDHQEVVTTGFLLVEPATLAHVPDLASLDMRACTPRVLAHREELMPRLIDLAALDL 71 Query: 61 DQQQWMTTALRSAPHAEEPPILCAWLESVADPERLVRGLTRFLIGPGVEDRQVYWRYYDP 120 + Q+ T + P + PP +CAW++S AD + L + R+L+GPG R V+WRYYDP Sbjct: 72 EGQRIATKRWQEEPEVDRPPAICAWIDSAADIDTLAEHVARYLVGPGEGGRPVFWRYYDP 131 Query: 121 RVLALTLQLFSDEQTRALLGPVTQWRFPWSGHWWSVTGPGEEIDVLGGSRPAWPDASQWH 180 RVL+L+L +F Q ALLGP +W F W+GH W G G + L WP QW Sbjct: 132 RVLSLSLAVFDPSQRLALLGPAREWCFAWAGHRWRSAGLGADFVPLDDQASGWPRPDQWP 191 Query: 181 SLAHCDVLDKVLRQLP 196 + ++ D+V R+LP Sbjct: 192 RINRSEIADRVRRRLP 207 >ref|ZP_06844637.1| hypothetical protein BCh11DRAFT_5904 [Burkholderia sp. Ch1-1] gb|EFG67672.1| hypothetical protein BCh11DRAFT_5904 [Burkholderia sp. Ch1-1] Length = 292 Score = 147 bits (372), Expect = 9e-34, Method: Composition-based stats. Identities = 87/250 (34%), Positives = 127/250 (50%), Gaps = 18/250 (7%) Query: 1 MHAISFPDEVITHGQVLVEPANLDPRSPLHELPMRVCEVGRIKDADDLMPRLIDMATLSA 60 + A P + G VL+E A + + L LP C + +LMPRL++++ LS Sbjct: 5 LRAAPAPQAPFSQGYVLIETATIGYAAGLERLPSVPCAPAALSHRVELMPRLVNVSALSP 64 Query: 61 DQQQWMTTALRSAPHAEEPPILCAWLESVADPERLVRGLTRFLIGPGVEDRQVYWRYYDP 120 +QQ +T +R + PP++CAWL+S +RL + R+L+GPG V WRYYDP Sbjct: 65 EQQTEITEVMRDELDGDRPPVICAWLQSSWPVDRLAEHVARYLVGPGANGSPVLWRYYDP 124 Query: 121 RVLALTLQLFSDEQTRALLGPVTQWRFPWSGHWWSVTGPGEEIDVLGGSRPAWPDASQWH 180 RV++L + + ALLGPV W P G WW++ G G E L G PAWP SQW Sbjct: 125 RVISLATSVLELARLSALLGPVDMWALPAVGRWWTIRGDGHEAPPLEGITPAWPTPSQWE 184 Query: 181 SLAHCDVLDKVLRQLPENLAACTPPEILQYLRRGDSALM--------HARQVLKLTDPGE 232 + + D+ + L +L + +Y R S LM A+Q L+DP Sbjct: 185 RIEYSDLAARALARLSDQ----------KYDFRDLSRLMGALCKSFDDAKQKAGLSDPEA 234 Query: 233 LTEYALHCLR 242 L +YA+H +R Sbjct: 235 LIDYAVHDMR 244 >ref|YP_001118285.1| hypothetical protein Bcep1808_0438 [Burkholderia vietnamiensis G4] gb|ABO53450.1| hypothetical protein Bcep1808_0438 [Burkholderia vietnamiensis G4] Length = 233 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 78/186 (41%), Positives = 109/186 (58%) Query: 11 ITHGQVLVEPANLDPRSPLHELPMRVCEVGRIKDADDLMPRLIDMATLSADQQQWMTTAL 70 +T G +LVEPA L L L MR C + ++LMPRLID+A L ++ T Sbjct: 1 MTTGFLLVEPATLAHVPDLAALDMRACTPRVLAHREELMPRLIDLAALDLKGRRIATERW 60 Query: 71 RSAPHAEEPPILCAWLESVADPERLVRGLTRFLIGPGVEDRQVYWRYYDPRVLALTLQLF 130 + P E PP +CAW++S AD + L + R+L+GPG + V+WRYYDPRVL+LTL +F Sbjct: 61 QEEPEVERPPAICAWIDSAADVDALAEHIARYLVGPGEGGQPVFWRYYDPRVLSLTLAVF 120 Query: 131 SDEQTRALLGPVTQWRFPWSGHWWSVTGPGEEIDVLGGSRPAWPDASQWHSLAHCDVLDK 190 Q ALLGPV +W F W+GH W TG G +I + WP QW + +++D+ Sbjct: 121 DPTQRLALLGPVHEWCFAWAGHRWRSTGLGADIVPPDDQQSGWPRPDQWPRINRSEIVDQ 180 Query: 191 VLRQLP 196 + R+LP Sbjct: 181 IRRRLP 186 >ref|YP_004350072.1| hypothetical protein bgla_2g21260 [Burkholderia gladioli BSR3] gb|AEA64560.1| hypothetical protein bgla_2g21260 [Burkholderia gladioli BSR3] Length = 285 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 77/233 (33%), Positives = 118/233 (50%), Gaps = 6/233 (2%) Query: 10 VITHGQVLVEPANLDPRSPLHELPMRVCEVGRIKDADDLMPRLIDMATLSADQQQWMTTA 69 V+ HG +L++P L E + C + ++ MPRL+D+A L + T Sbjct: 53 VLPHGFLLIDPVTRIDTPELSEFDGQPCVPRVLAHREECMPRLVDIAALDDQARTLATRY 112 Query: 70 LRSAPHAEEPPILCAWLESVADPERLVRGLTRFLIGPGVEDRQVYWRYYDPRVLALTLQL 129 L + H E P++CA L+S A + + + L+GPG E V+WR+YDPRV+++ L + Sbjct: 113 LLAERHVERAPVICARLDSEASGDAIREHIANHLVGPGAEGADVFWRFYDPRVMSMALAV 172 Query: 130 FSDEQTRALLGPVTQWRFPWSGHWWSVTGPGEEIDVLGGSRPAWPDASQWHSLAHCDVLD 189 Q +ALLGPVT W FPW+GH+W V G + + S WP QW + D+ D Sbjct: 173 LDPSQRQALLGPVTSWTFPWAGHYWCVETSGNGLAAVDASS-GWPRPDQWPRIDRSDLAD 231 Query: 190 KVLRQLPENLAACTPPEILQYLRRGDSALMHARQVLKLTDPGELTEYALHCLR 242 +++R+ LA + L +L + +T P L +YALH LR Sbjct: 232 RIVRR---RLAFSV--DHLAHLPSTLDRMFCEAVCQGITSPDALVDYALHRLR 279