BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4273.p (824 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776794.1| VGR-related protein [Herbaspirillum seropedi... 1401 0.0 ref|ZP_06844638.1| Rhs element Vgr protein [Burkholderia sp. Ch1... 839 0.0 ref|YP_004754924.1| Rhs element Vgr protein [Collimonas fungivor... 818 0.0 ref|YP_004750686.1| Rhs element Vgr protein [Collimonas fungivor... 816 0.0 ref|YP_004750741.1| Rhs element Vgr protein [Collimonas fungivor... 809 0.0 >ref|YP_003776794.1| VGR-related protein [Herbaspirillum seropedicae SmR1] gb|ADJ64886.1| VGR-related protein [Herbaspirillum seropedicae SmR1] Length = 824 Score = 1401 bits (3626), Expect = 0.0, Method: Composition-based stats. Identities = 717/824 (87%), Positives = 757/824 (91%) Query: 1 MHSRTTGWDSLTRQRQHQRILQLNFIHDDGPAAALLVNRLEASEALSRDFSYTLELLSDD 60 MHS TT WD LTRQRQH RILQL FI+DD P A LL+NRLEASEALSRD+ YTLELLSDD Sbjct: 1 MHSHTTRWDKLTRQRQHNRILQLFFINDDAPDAELLINRLEASEALSRDYVYTLELLSDD 60 Query: 61 AGIELHAMMGKLLCVTLTRADGTHRYFTGYVDRFALLRSDGGIAFYEARLAPWLALLAVR 120 A I L AMMGKLL V LTRADGT R+FTGYV+RFA LRSDGGIAFYEARL PWLA LA R Sbjct: 61 AHIPLDAMMGKLLRVALTRADGTQRHFTGYVERFAFLRSDGGIAFYEARLVPWLAFLASR 120 Query: 121 RNNRIFHQLSLEGLSAELFNDYRTHAHWDCQLRHGDPVRTDMFQFDESDSNLLHRRWEDA 180 NNRIFH LSLEGLSA +F Y HA WDCQLRHGDPVRT+MFQFDESDSNLLHRRWEDA Sbjct: 121 HNNRIFHHLSLEGLSAAIFRAYPMHARWDCQLRHGDPVRTEMFQFDESDSNLLHRRWEDA 180 Query: 181 GWHYHYEHQSDGHQLRLSDDSTYANPIDGGGQVPFQHHGGAIEEDGMAQWSMVRQFQPSS 240 GWHYHYEHQ+DGHQLRLSDDSTYA PIDG GQVPFQ HGGAIEEDGMAQWS VRQFQPSS Sbjct: 181 GWHYHYEHQADGHQLRLSDDSTYAKPIDGTGQVPFQRHGGAIEEDGMAQWSAVRQFQPSS 240 Query: 241 TRLSSYDFKTARPQQVDVPTLNKQGAVLPVEHYEYTGAYGFSNLEAGDRQSRVRMEEFEA 300 TRLSSYDFK ARPQ+V+VPTLNKQGAVL VEHYEY GAYGF+N + GDRQSR+RMEEFEA Sbjct: 241 TRLSSYDFKAARPQEVEVPTLNKQGAVLQVEHYEYAGAYGFANRDDGDRQSRLRMEEFEA 300 Query: 301 AAQLFEGIGNCRFLQPGRTFRLTGHFSAPATSHDHDRDPELLIVSVEHSATNNYLQDSET 360 AAQ+FEG GNCRFLQPGRTFRLTGHFS A SHDHDRDPELLI+SVEHSATNNYLQDSET Sbjct: 301 AAQVFEGTGNCRFLQPGRTFRLTGHFSGSAASHDHDRDPELLIISVEHSATNNYLQDSET 360 Query: 361 PPTYTNRVRCVPKRIPWRPGRSYYSRSTALHGIQTATVVGPSGENLHVDEYGRVKVQFHW 420 PP Y NRVRCV KRIPWRPGRSYYS+ TAL GIQTATVVGP+GENLHVDEYGRVKVQFHW Sbjct: 361 PPFYANRVRCVRKRIPWRPGRSYYSQPTALLGIQTATVVGPAGENLHVDEYGRVKVQFHW 420 Query: 421 DLLGRNDERSSAWLRVASSWTGAEQGLVAVPRIGQLVIVQWVGGHPDRPIITGSVVNQLN 480 D +GRNDERSSAWLRVASSW+G EQGLV+VPRIGQLVIVQW+GGHPDRPIITGSVVNQLN Sbjct: 421 DQIGRNDERSSAWLRVASSWSGGEQGLVSVPRIGQLVIVQWLGGHPDRPIITGSVVNQLN 480 Query: 481 MPPWSLPSQSALSGMRSRELAPQAGNAPGGRSGHVLFDDTHEAIQTQVRSDAFDSQLALG 540 MPPW+LPSQSALSGMRSRELAP+ GNAPGGRSGHVLFDDTHEAIQTQVRSDAFDSQLALG Sbjct: 481 MPPWTLPSQSALSGMRSRELAPRTGNAPGGRSGHVLFDDTHEAIQTQVRSDAFDSQLALG 540 Query: 541 HVTRIEHSVGRQDARGEGFELRTDAHGVVRAAQGLLLTSEPRPKARGHITDLAETVGRLA 600 H+TRIE GRQDARGEGFELRTDAHGVVRAAQGLLLTSEPRPKA H TD+ ETV RL Sbjct: 541 HITRIERHAGRQDARGEGFELRTDAHGVVRAAQGLLLTSEPRPKAHRHTTDIGETVARLT 600 Query: 601 QAQGTVASLSKLAQEHQAQDKSADQQQAAQAIQSQNDAIKGQGDAQDGRCPELAEPHLVL 660 QA+GTV SLSKLAQEH+AQDK+ADQ AAQAI++QNDAIKG G A+ GR PEL EPHLVL Sbjct: 601 QARGTVESLSKLAQEHEAQDKNADQYDAAQAIKAQNDAIKGDGAAKGGRFPELTEPHLVL 660 Query: 661 SSPSGIEASSGASTHLASAEHAAVTAGSHVSVAAGKSFFASAAEKLSLLAYRLGAKLIAA 720 SSPSGIEASSGASTHLASAEHAA+TAGSH+S+AAGKSFFASAAEKLSLLAYRLGAKLIAA Sbjct: 661 SSPSGIEASSGASTHLASAEHAALTAGSHISLAAGKSFFASAAEKLSLLAYRLGAKLIAA 720 Query: 721 SGRVEIQAQNDGMEILAQKVVDIISTRDWINLKAKKGIRLNGGGSELVIAEGITGFTQGA 780 SGRVEIQAQNDGME+LAQKVVDIISTRDWINLKAKKGIRLNGGGSELVIAEGITGFTQGA Sbjct: 721 SGRVEIQAQNDGMELLAQKVVDIISTRDWINLKAKKGIRLNGGGSELVIAEGITGFTQGA 780 Query: 781 HHVHASDHQTLGPQAKPAEFPGAQLCPSRASGAAQSGSASVALS 824 HHVHA+DHQTLGPQ +PAEFPG++LCP+RASGAAQSGSASV LS Sbjct: 781 HHVHAADHQTLGPQGRPAEFPGSRLCPARASGAAQSGSASVVLS 824 >ref|ZP_06844638.1| Rhs element Vgr protein [Burkholderia sp. Ch1-1] gb|EFG67673.1| Rhs element Vgr protein [Burkholderia sp. Ch1-1] Length = 823 Score = 839 bits (2167), Expect = 0.0, Method: Composition-based stats. Identities = 432/812 (53%), Positives = 559/812 (68%), Gaps = 6/812 (0%) Query: 15 RQHQRILQLNFIHDDGPAAALLVNRLEASEALSRDFSYTLELLSDDAGIELHAMMGKLLC 74 RQ R+L+L F HDD P LL NRL +E+LSRDF + +E+LSD+A + L GK++ Sbjct: 16 RQQSRLLRLTFPHDDAPYPTLLANRLTGTESLSRDFEFKVEILSDNASLSLKDFQGKMIT 75 Query: 75 VTLTRADGTHRYFTGYVDRFALLRSDGGIAFYEARLAPWLALLAVRRNNRIFHQLSLEGL 134 V L RADGT RYF GY+ F +++DG +AFYEA + PWL L +R NNR+F L Sbjct: 76 VELARADGTSRYFNGYIFAFRHVKTDGSVAFYEATIGPWLRFLTLRTNNRLFQDQDLHTQ 135 Query: 135 SAELFNDYRTHAHWDCQLRHGDPVRTDMFQFDESDSNLLHRRWEDAGWHYHYEHQSDGHQ 194 + L DY WD ++ DPV T Q+ ESD N LHRRWE AG++Y YEH + H+ Sbjct: 136 TNTLLQDYGVLPDWDWKVAGADPVMTMAVQYGESDHNYLHRRWEAAGFYYWYEHTAKSHK 195 Query: 195 LRLSDDSTYANPIDG-GGQVPFQHHGGAIEEDGMAQWSMVRQFQPSSTRLSSYDFKTARP 253 L +SD S A IDG VPFQ G+ EDG+A WS VR P ++ +DFK+ RP Sbjct: 196 LIVSDASINAKQIDGNSASVPFQRDSGSKVEDGLALWSPVRSVMPGQYTVARFDFKSPRP 255 Query: 254 QQVDVPTLNKQGAVLPVEHYEYTGAYGFSNLEAGDRQSRVRMEEFEAAAQLFEGIGNCRF 313 VPT+N+QG V +E YEY GAYGF + GD S+ RMEE EA A+ FEG GN R+ Sbjct: 256 ATAGVPTINQQGGVPNLEQYEYVGAYGFGGSQDGDGLSKRRMEEIEAVAKRFEGEGNNRY 315 Query: 314 LQPGRTFRLTGHFSAPATSHDHDRDPELLIVSVEHSATNNYLQDSETPPTYTNRVRCVPK 373 + PGR F LT HF S D D + L+V V+H A+NNYLQ + P Y N V + K Sbjct: 316 VMPGRWFELTDHFGHADGSQD---DNQFLVVGVDHVASNNYLQGVDAPSDYRNDVIAIRK 372 Query: 374 RIPWRPGRSYYSRSTALHGIQTATVVGPSGENLHVDEYGRVKVQFHWDLLGRNDERSSAW 433 +IPWRPGR Y S T ++ QTATVVGPSG++++ D+YGR +VQFHWD L + DE SSAW Sbjct: 373 KIPWRPGRGYNSVDTRINAPQTATVVGPSGQSVYTDKYGRCRVQFHWDQLAKGDESSSAW 432 Query: 434 LRVASSWTGAEQGLVAVPRIGQLVIVQWVGGHPDRPIITGSVVNQLNMPPWSLPSQSALS 493 +RVA++W G +QG VA+PR+G VIVQW+ G PDRPIITG V N+ N+P W LP QSAL Sbjct: 433 VRVATAWAGGDQGFVALPRVGSEVIVQWLEGSPDRPIITGRVHNESNLPSWQLPDQSALM 492 Query: 494 GMRSRELAPQAGNAPGGRSGHVLFDDTHEAIQTQVRSDAFDSQLALGHVTRIEHSVGRQD 553 G RSREL+ GN GRS H+LFDDT + IQTQ+RSD SQL+LGH+TR+E + GRQD Sbjct: 493 GFRSRELSGANGNMASGRSNHLLFDDTKDQIQTQLRSDHEASQLSLGHITRVEDNTGRQD 552 Query: 554 ARGEGFELRTDAHGVVRAAQGLLLTSEPRPKARGHITDLAETVGRLAQAQGTVASLSKLA 613 RGEGFELRTD+ G +R+ +G+L++++ RP A+ HI+D+ E RL ++Q A L KLA Sbjct: 553 GRGEGFELRTDSVGAIRSGKGMLISTDARPLAKSHISDINEATTRLGKSQTLQAQLGKLA 612 Query: 614 QEHQAQDKSADQQQAAQAIQSQNDAIKGQGDAQDGRCPELAEPHLVLSSPSGIEASSGAS 673 Q+H AQ+ S DQ A A+QSQND +KG +G PEL EP L+++S +G SS S Sbjct: 613 QQHSAQE-SGDQSNVADALQSQNDGLKGSSSGGNGSFPELNEPQLLVASAAGTAVSSTGS 671 Query: 674 THLASAEHAAVTAGSHVSVAAGKSFFASAAEKLSLLAYRLGAKLIAASGRVEIQAQNDGM 733 TH+AS EH AVTAGS++S+ AGKS FASA+EKLS+ +R+G LIAASG+V+IQAQND + Sbjct: 672 THVASGEHTAVTAGSNISLGAGKSIFASASEKLSIFVHRMGMTLIAASGKVQIQAQNDEL 731 Query: 734 EILAQKVVDIISTRDWINLKAKKGIRLNGGGSELVI-AEGITGFTQGAHHVHASDHQTLG 792 E+LA+KVV IIST DW+N+ AK+GIRL G S+ V+ AEGI GFT G + +HA++H T G Sbjct: 732 ELLAKKVVGIISTTDWVNITAKQGIRLTAGNSQFVVSAEGINGFTPGGNTIHAANHGTHG 791 Query: 793 PQAKPAEFPGAQLCPSRASGAAQSGSASVALS 824 PQ+ PA+FPGA LC + + AA++GSASV L+ Sbjct: 792 PQSIPAQFPGADLCQTMTNSAAEAGSASVPLA 823 >ref|YP_004754924.1| Rhs element Vgr protein [Collimonas fungivorans Ter331] gb|AEK64101.1| Rhs element Vgr protein [Collimonas fungivorans Ter331] Length = 818 Score = 818 bits (2113), Expect = 0.0, Method: Composition-based stats. Identities = 415/798 (52%), Positives = 553/798 (69%), Gaps = 6/798 (0%) Query: 10 SLTRQRQHQRILQLNFIHDDGPAAALLVNRLEASEALSRDFSYTLELLSDDAGIELHAMM 69 SL RQ RIL+L+F HDDGP+A LLVN+L+A E+LSRDF +T+ELLSDDA + L + Sbjct: 10 SLISGRQTNRILRLSFPHDDGPSAQLLVNKLDAVESLSRDFEFTVELLSDDASLALKDLQ 69 Query: 70 GKLLCVTLTRADGTHRYFTGYVDRFALLRSDGGIAFYEARLAPWLALLAVRRNNRIFHQL 129 GKL V L RADG+ RYF+GY F L+++DG I+FY+A+L PWL L +R++N IFH Sbjct: 70 GKLFNVELVRADGSLRYFSGYCFEFRLVKTDGSISFYQAKLGPWLQYLRLRKDNYIFHGK 129 Query: 130 SLEGLSAELFNDYRTHAHWDCQLRHGDPVRTDMFQFDESDSNLLHRRWEDAGWHYHYEHQ 189 +L + +F+DY TH WD ++R D TD QF+ESD N LHRRWE AGW Y YEH Sbjct: 130 TLREQTESIFSDYGTHPDWDVRVRGEDVAMTDACQFNESDFNYLHRRWEAAGWSYWYEHS 189 Query: 190 SDGHQLRLSDDSTYANPIDGGGQVPFQHHGGAIEEDGMAQWSMVRQFQPSSTRLSSYDFK 249 GH+L L+DD+T A ID G ++ FQ HGGAIEEDG+ WS VRQ P S L+ ++FK Sbjct: 190 DKGHKLILTDDTTQAAAIDNGPEIRFQRHGGAIEEDGIGDWSPVRQIVPGSVSLAGFNFK 249 Query: 250 TARPQQVDVPTLNKQGAVLPVEHYEYTGAYGFSNLEAGDRQSRVRMEEFEAAAQLFEGIG 309 + P V VPTLNKQG VL +E YEYTGAYG+ + GD+Q+++RMEE EAA + FE G Sbjct: 250 SPVPSNVGVPTLNKQGDVLNIESYEYTGAYGYKGSQDGDKQAQLRMEEIEAAGKHFEAKG 309 Query: 310 NCRFLQPGRTFRLTGHFS-APATSHDHDRDPELLIVSVEHSATNNYLQDSETPPTYTNRV 368 N R + PGR FRL+ HF+ P SH+ E LI++V H ATNNYLQ + Y+N + Sbjct: 310 NNRSVLPGRYFRLSNHFAFNPFGSHEEAGKSEFLILTVHHKATNNYLQQASDKADYSNAL 369 Query: 369 RCVPKRIPWRPGRSYYSRSTALHGIQTATVVGPSGEN-LHVDEYGRVKVQFHWDLLGRND 427 C+ K IPWRPGR + S +T + QTATVVGPSG++ ++ DEYGR++VQFHWD +G ND Sbjct: 370 TCIRKTIPWRPGRGFNSSATKIQAPQTATVVGPSGQDSIYTDEYGRIRVQFHWDRIGNND 429 Query: 428 ERSSAWLRVASSWTGAEQGLVAVPRIGQLVIVQWVGGHPDRPIITGSVVNQLNMPPWSLP 487 E+SSAW+RVASSW G+E G A+PR+G VIVQW+ G+PDRP+ITGSV NQ NMPPW L Sbjct: 430 EKSSAWIRVASSWAGSELGAAAIPRVGSEVIVQWLDGNPDRPLITGSVYNQRNMPPWKLA 489 Query: 488 SQSALSGMRSRELAPQAGNAPGGRSGHVLFDDTHEAIQTQVRSDAFDSQLALGHVTRIEH 547 +Q +L G+RSREL P GN GGRS H++ DDT+ IQ Q++SD SQL+LG++TRIE Sbjct: 490 TQQSLMGLRSRELTPNGGNQAGGRSNHLILDDTNAKIQAQLKSDHQHSQLSLGNITRIED 549 Query: 548 SVGRQDARGEGFELRTDAHGVVRAAQGLLLTSEPRPKARGHITDLAETVGRLAQAQGTVA 607 + GR+DARGEG+ELRTD HGV R+A+G+L+T+E R A H+ D+ ETV RL A+ Sbjct: 550 NAGRKDARGEGWELRTDGHGVARSAKGMLITTEGRSNAASHMKDMGETVQRLTSARDQHE 609 Query: 608 SLSKLAQEHQAQDKSADQQQAAQAIQSQNDAIKGQGDAQDGRCPELAEPHLVLSSPSGIE 667 +L+++AQ+ AQ+K Q AQ +++QN+AIKG G AQ+G PELA+PHLVL+SP+GIE Sbjct: 610 TLAEMAQQAGAQEKQGQQADVAQILKTQNEAIKG-GTAQEGSFPELAQPHLVLASPAGIE 668 Query: 668 ASSGASTHLASAEHAAVTAGSHVSVAAGKSFFASAAEKLSLLAYRLGAKLIAASGRVEIQ 727 ++ STH+AS EH A+T G +S+A+G S FAS L + KL A +G +++Q Sbjct: 669 TTTAQSTHIASDEHTAITTGKSLSIASGDSLFASIKNTFRLFVQKANIKLTAGTGDIDMQ 728 Query: 728 AQNDGMEILAQKVVDIISTRDWINLKAKKGIRLNGGGSELVI-AEGITGFTQGAHHVHAS 786 A +D + +L++ ++I T + I + AK+ + +NGGGS + A GI T G + HA+ Sbjct: 729 ALSDSINLLSK--LNITHTANRITITAKEEVLINGGGSYVKYNAAGIEHGTNGNYVAHAA 786 Query: 787 DHQTLGPQAKPAEFPGAQ 804 H GP+ P P Q Sbjct: 787 THSLPGPKQIPVTMPKFQ 804 >ref|YP_004750686.1| Rhs element Vgr protein [Collimonas fungivorans Ter331] gb|AEK59863.1| Rhs element Vgr protein [Collimonas fungivorans Ter331] Length = 905 Score = 816 bits (2109), Expect = 0.0, Method: Composition-based stats. Identities = 413/782 (52%), Positives = 548/782 (70%), Gaps = 5/782 (0%) Query: 15 RQHQRILQLNFIHDDGPAAALLVNRLEASEALSRDFSYTLELLSDDAGIELHAMMGKLLC 74 RQH RIL+L+F HDDGP A LLVN+L+A E+LSRDF++T+ELLSDDAG+ L + GKL Sbjct: 15 RQHDRILRLSFPHDDGPQAQLLVNKLDAVESLSRDFAFTVELLSDDAGLALKDLQGKLFT 74 Query: 75 VTLTRADGTHRYFTGYVDRFALLRSDGGIAFYEARLAPWLALLAVRRNNRIFHQLSLEGL 134 V L RADG+ RYF+GY F L+R+DG I+FY+ARL PWL L +R++N IFH +L Sbjct: 75 VELVRADGSLRYFSGYCFEFRLIRTDGSISFYQARLGPWLQYLHLRKDNFIFHGKTLREQ 134 Query: 135 SAELFNDYRTHAHWDCQLRHGDPVRTDMFQFDESDSNLLHRRWEDAGWHYHYEHQSDGHQ 194 +F+DY T WD ++ DP TD FQF+ESDSN +HRR E AG Y+YEH + GH+ Sbjct: 135 LDSIFSDYGTLPDWDFRVSGEDPAMTDAFQFNESDSNYVHRRLEAAGLLYYYEHSAQGHK 194 Query: 195 LRLSDDSTYANPIDGGGQVPFQHHGGAIEEDGMAQWSMVRQFQPSSTRLSSYDFKTARPQ 254 L ++DDST A IDGG ++ FQ HGGAIEEDG+ ++S VRQ P S LS ++FK+ P Sbjct: 195 LVITDDSTQAAAIDGGPEIRFQRHGGAIEEDGIGEFSPVRQIVPGSVSLSGFNFKSPVPI 254 Query: 255 QVDVPTLNKQGAVLPVEHYEYTGAYGFSNLEAGDRQSRVRMEEFEAAAQLFEGIGNCRFL 314 VPTLNKQG VL +E YEY GAYG N + D+ SR+RMEE EAA + FE GN R + Sbjct: 255 NAGVPTLNKQGNVLDIESYEYVGAYGVKNAQDADKLSRLRMEEIEAAGKHFEAAGNNRSV 314 Query: 315 QPGRTFRLTGHFS-APATSHDHDRDPELLIVSVEHSATNNYLQDSETPPTYTNRVRCVPK 373 PGR ++LTGHF+ P SH+ E LI+SV H A+NNYLQ ++ Y+NR+ C+ K Sbjct: 315 LPGRWYQLTGHFAFNPFGSHEEAGKNEFLILSVHHVASNNYLQQADQKADYSNRLTCIRK 374 Query: 374 RIPWRPGRSYYSRSTALHGIQTATVVGPSGE-NLHVDEYGRVKVQFHWDLLGRNDERSSA 432 IPWRPGR + S +T + QT TVVGPSG+ ++H DEYGR++VQFHWD +G NDE+SSA Sbjct: 375 SIPWRPGRGFNSVATKILSPQTVTVVGPSGQGSIHTDEYGRIRVQFHWDRIGNNDEKSSA 434 Query: 433 WLRVASSWTGAEQGLVAVPRIGQLVIVQWVGGHPDRPIITGSVVNQLNMPPWSLPSQSAL 492 W+RVASSW G E G ++PR+G +VQW+ G+PDRPI+TGSV NQ NMPPW L +Q L Sbjct: 435 WVRVASSWAGGELGAKSIPRVGSECVVQWLDGNPDRPIVTGSVYNQRNMPPWKLATQQPL 494 Query: 493 SGMRSRELAPQAGNAPGGRSGHVLFDDTHEAIQTQVRSDAFDSQLALGHVTRIEHSVGRQ 552 G RSREL P GN PGGRS H++ DD++ IQ Q++SD SQL+LGH+TRIE + GR+ Sbjct: 495 MGFRSRELTPNGGNQPGGRSNHLILDDSNGKIQAQLKSDHQHSQLSLGHITRIEDNAGRK 554 Query: 553 DARGEGFELRTDAHGVVRAAQGLLLTSEPRPKARGHITDLAETVGRLAQAQGTVASLSKL 612 DARGEG+ELRTD HGVVR+A+G+L+T+E R A HI D+ ETV RL A+ +L+ + Sbjct: 555 DARGEGWELRTDGHGVVRSAKGMLITTEARGNAASHIKDMGETVQRLTSARDQHETLADM 614 Query: 613 AQEHQAQDKSADQQQAAQAIQSQNDAIKGQGDAQDGRCPELAEPHLVLSSPSGIEASSGA 672 A++ AQ+K Q A+ +++QNDAIKG G DG PEL+ PHLVL+SP+GIE+++ Sbjct: 615 ARQAGAQEKQGQQVDIAKILKAQNDAIKGSGAGGDGNFPELSSPHLVLASPAGIESTTSG 674 Query: 673 STHLASAEHAAVTAGSHVSVAAGKSFFASAAEKLSLLAYRLGAKLIAASGRVEIQAQNDG 732 STH+AS ++ A+T G +S+A+G S FAS + L Y+ G K+IAA G +++QA +G Sbjct: 675 STHIASGQNTAITTGKSLSIASGDSLFASIRQTFRLFVYKAGMKMIAAGGDIDVQALTNG 734 Query: 733 MEILAQKVVDIISTRDWINLKAKKGIRLNGGGSELVI-AEGITGFTQGAHHVHASDHQTL 791 + ILA+ ++I T + I + AK+ + +NGGGS + A GI T G + HA+ H Sbjct: 735 INILAK--LNITHTANRITIVAKEEVMINGGGSYVKYNAAGIEHGTNGIYVAHAATHSLP 792 Query: 792 GP 793 GP Sbjct: 793 GP 794 >ref|YP_004750741.1| Rhs element Vgr protein [Collimonas fungivorans Ter331] gb|AEK59918.1| Rhs element Vgr protein [Collimonas fungivorans Ter331] Length = 883 Score = 809 bits (2090), Expect = 0.0, Method: Composition-based stats. Identities = 414/798 (51%), Positives = 552/798 (69%), Gaps = 9/798 (1%) Query: 10 SLTRQRQHQRILQLNFIHDDGPAAALLVNRLEASEALSRDFSYTLELLSDDAGIELHAMM 69 SL RQ RIL+L+F HDDGP+A LLVN+L+A E+LSRDF +T+ELLSDDA + L + Sbjct: 14 SLISGRQTNRILRLSFPHDDGPSAQLLVNKLDAVESLSRDFEFTVELLSDDASLALKDLQ 73 Query: 70 GKLLCVTLTRADGTHRYFTGYVDRFALLRSDGGIAFYEARLAPWLALLAVRRNNRIFHQL 129 GKL V L RADG+ RYF+GY F L+++DG I+FY+A+L PWL L +R++N IFH Sbjct: 74 GKLFNVELVRADGSLRYFSGYCFEFRLVKTDGSISFYQAKLGPWLHYLRLRQDNYIFHGK 133 Query: 130 SLEGLSAELFNDYRTHAHWDCQLRHGDPVRTDMFQFDESDSNLLHRRWEDAGWHYHYEHQ 189 +L + +F+DY TH WD ++R D TD QF+ESD N LHRRWE AGW Y YEH Sbjct: 134 TLREQTESIFSDYGTHPDWDVRVRGEDVAMTDACQFNESDFNYLHRRWEAAGWSYWYEHT 193 Query: 190 SDGHQLRLSDDSTYANPIDGGGQVPFQHHGGAIEEDGMAQWSMVRQFQPSSTRLSSYDFK 249 GH+L L+DD+T A ID G ++ FQ HGGAIEEDG+ WS VRQ P S L+ ++FK Sbjct: 194 DKGHKLILTDDTTQAAAIDNGPEIRFQRHGGAIEEDGIGDWSPVRQIVPGSVSLAGFNFK 253 Query: 250 TARPQQVDVPTLNKQGAVLPVEHYEYTGAYGFSNLEAGDRQSRVRMEEFEAAAQLFEGIG 309 + P V VPTLNKQG VL +E YEYTG YG+ + GD+Q+++RMEE EAA + FE G Sbjct: 254 SPVPSNVGVPTLNKQGDVLNIESYEYTGTYGYKGSQDGDKQAQLRMEEIEAAGKHFEAKG 313 Query: 310 NCRFLQPGRTFRLTGHFS-APATSHDHDRDPELLIVSVEHSATNNYLQDSETPPTYTNRV 368 N R + PGR FRL+ HF+ P SH+ E LI++V H ATNNYLQ + Y+N + Sbjct: 314 NNRSVLPGRYFRLSNHFAFNPFGSHEEAGKSEFLILTVHHKATNNYLQQASDKADYSNAL 373 Query: 369 RCVPKRIPWRPGRSYYSRSTALHGIQTATVVGPSGEN-LHVDEYGRVKVQFHWDLLGRND 427 C+ K IPWRPGR + S +T + QTATVVGPSG++ ++ DEYGR++VQFHWD +G ND Sbjct: 374 TCIRKTIPWRPGRGFNSTATRIQAPQTATVVGPSGQDSIYTDEYGRIRVQFHWDRIGNND 433 Query: 428 ERSSAWLRVASSWTGAEQGLVAVPRIGQLVIVQWVGGHPDRPIITGSVVNQLNMPPWSLP 487 E+SSAW+RVAS W G+E G A+PR+G VIVQW+ G+PDRP+ITGSV NQ NMPPW L Sbjct: 434 EKSSAWIRVASGWAGSELGAAAIPRVGSEVIVQWLDGNPDRPLITGSVYNQRNMPPWKLA 493 Query: 488 SQSALSGMRSRELAPQAGNAPGGRSGHVLFDDTHEAIQTQVRSDAFDSQLALGHVTRIEH 547 +Q +L G+RSREL P GN GGRS H++ DDT+ IQ Q++SD SQL+LG++TRIE Sbjct: 494 TQQSLMGLRSRELTPNGGNQAGGRSNHLILDDTNAKIQAQLKSDHQHSQLSLGNITRIED 553 Query: 548 SVGRQDARGEGFELRTDAHGVVRAAQGLLLTSEPRPKARGHITDLAETVGRLAQAQGTVA 607 + GR+DARGEG+ELRTD HGV R+A+G+L+T+E R A H+ D+ ETV RL A+ Sbjct: 554 NAGRKDARGEGWELRTDGHGVARSAKGMLITTEGRSNAASHMKDMGETVQRLTSARDQHE 613 Query: 608 SLSKLAQEHQAQDKSADQQQAAQAIQSQNDAIKGQGDAQDGRCPELAEPHLVLSSPSGIE 667 +L+++AQ+ AQ+K Q AQ +++QN+AIKG G A++G PELA+PHLVL+SP+GIE Sbjct: 614 TLAEMAQQAGAQEKQGQQADVAQILKTQNEAIKG-GTAKEGSFPELAQPHLVLASPAGIE 672 Query: 668 ASSGASTHLASAEHAAVTAGSHVSVAAGKSFFASAAEKLSLLAYRLGAKLIAASGRVEIQ 727 ++ STH+AS EH A+T G +S+A+G S FAS L + G K++AA+G V++Q Sbjct: 673 TTTAQSTHIASDEHTAITTGKSLSIASGDSLFASITNTFRLFVQKTGMKMVAAAGDVDMQ 732 Query: 728 AQNDGMEILAQKVVDIISTRDWINLKAKKGIRLNGGGSELVI-AEGITGFTQGAHHVHAS 786 +D + +LA+ ++I T + I + AK+ + +NGGGS A GI T G + HA+ Sbjct: 733 TLSDSINLLAK--LNITQTANTITITAKEEVVINGGGSYGKFNAGGIEHGTNGNYVAHAA 790 Query: 787 DHQTLGPQ---AKPAEFP 801 H G + K EFP Sbjct: 791 THSLPGAKNLAIKMPEFP 808